RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 NWD2Q9ULI1 1742 aa18.8■□□□□ 0.6
ATPAF2-208ENST00000496852 LRP6O75581 1613 aa18.8■□□□□ 0.6
ATPAF2-208ENST00000496852 PPM1GO15355 546 aaPredicted RBP18.79■□□□□ 0.6
ATPAF2-208ENST00000496852 RGPD1P0DJD0 1748 aa18.79■□□□□ 0.6
ATPAF2-208ENST00000496852 HOXC9P31274 260 aa18.79■□□□□ 0.6
ATPAF2-208ENST00000496852 AMPHP49418 695 aa18.79■□□□□ 0.6
ATPAF2-208ENST00000496852 NRAPQ86VF7 1730 aa18.78■□□□□ 0.6
ATPAF2-208ENST00000496852 IP6K1Q92551 441 aa18.78■□□□□ 0.6
ATPAF2-208ENST00000496852 BLMP54132 1417 aaPredicted RBP18.78■□□□□ 0.6
ATPAF2-208ENST00000496852 CAMTA1Q9Y6Y1 1673 aa18.77■□□□□ 0.6
ATPAF2-208ENST00000496852 ZBTB7CA1YPR0 619 aa18.77■□□□□ 0.6
ATPAF2-208ENST00000496852 NUTM2BA6NNL0 878 aaPredicted RBP18.77■□□□□ 0.6
ATPAF2-208ENST00000496852 NUTM2EB1AL46 878 aaPredicted RBP18.77■□□□□ 0.6
ATPAF2-208ENST00000496852 NUTM2AQ8IVF1 878 aaPredicted RBP18.77■□□□□ 0.6
ATPAF2-208ENST00000496852 MRS2Q9HD23 443 aa18.77■□□□□ 0.6
ATPAF2-208ENST00000496852 HSP90AB2PQ58FF8 381 aa18.76■□□□□ 0.59
ATPAF2-208ENST00000496852 CFAP53Q96M91 514 aa18.76■□□□□ 0.59
ATPAF2-208ENST00000496852 PRDM11Q9NQV5 511 aa18.76■□□□□ 0.59
ATPAF2-208ENST00000496852 CHRNA2Q15822 529 aa18.76■□□□□ 0.59
ATPAF2-208ENST00000496852 AXIN2Q9Y2T1 843 aa18.76■□□□□ 0.59
ATPAF2-208ENST00000496852 FAM83GA6ND36 823 aa18.75■□□□□ 0.59
ATPAF2-208ENST00000496852 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.74■□□□□ 0.59
ATPAF2-208ENST00000496852 ADAMTS2O95450 1211 aa18.73■□□□□ 0.59
ATPAF2-208ENST00000496852 COL5A2P05997 1499 aaPredicted RBP18.72■□□□□ 0.59
ATPAF2-208ENST00000496852 DIAPH1O60610 1272 aaKnown RBP18.72■□□□□ 0.59
ATPAF2-208ENST00000496852 EIF4A2Q14240 407 aaKnown RBP18.72■□□□□ 0.59
ATPAF2-208ENST00000496852 SLIT2O94813 1529 aa18.72■□□□□ 0.59
ATPAF2-208ENST00000496852 IL13P35225 146 aa18.71■□□□□ 0.59
ATPAF2-208ENST00000496852 PNISRQ8TF01 805 aaKnown RBP18.7■□□□□ 0.58
ATPAF2-208ENST00000496852 ERBB3P21860 1342 aa18.7■□□□□ 0.58
ATPAF2-208ENST00000496852 ANKRD24Q8TF21 1146 aa18.69■□□□□ 0.58
ATPAF2-208ENST00000496852 WNK3Q9BYP7 1800 aa18.68■□□□□ 0.58
ATPAF2-208ENST00000496852 LTV1Q96GA3 475 aaPredicted RBP18.67■□□□□ 0.58
ATPAF2-208ENST00000496852 BTG4Q9NY30 223 aa18.67■□□□□ 0.58
ATPAF2-208ENST00000496852 NUDCQ9Y266 331 aa18.67■□□□□ 0.58
ATPAF2-208ENST00000496852 NCAPD2Q15021 1401 aa18.66■□□□□ 0.58
ATPAF2-208ENST00000496852 C8orf37Q96NL8 207 aa18.65■□□□□ 0.58
ATPAF2-208ENST00000496852 EYA1Q99502 592 aa18.65■□□□□ 0.58
ATPAF2-208ENST00000496852 WDR17Q8IZU2 1322 aa18.65■□□□□ 0.58
ATPAF2-208ENST00000496852 IGSF1Q8N6C5 1336 aa18.65■□□□□ 0.58
ATPAF2-208ENST00000496852 U2SURPO15042 1029 aaKnown RBP18.64■□□□□ 0.57
ATPAF2-208ENST00000496852 WDR43Q15061 677 aaKnown RBP eCLIP18.64■□□□□ 0.57
ATPAF2-208ENST00000496852 FNBP4Q8N3X1 1017 aaPredicted RBP18.64■□□□□ 0.57
ATPAF2-208ENST00000496852 BCL9LQ86UU0 1499 aa18.64■□□□□ 0.57
ATPAF2-208ENST00000496852 MEX3CQ5U5Q3 659 aaKnown RBP18.63■□□□□ 0.57
ATPAF2-208ENST00000496852 NGLY1Q96IV0 654 aa18.63■□□□□ 0.57
ATPAF2-208ENST00000496852 KDRP35968 1356 aa18.63■□□□□ 0.57
ATPAF2-208ENST00000496852 NBPF6Q5VWK0 638 aa18.63■□□□□ 0.57
ATPAF2-208ENST00000496852 FAM9BQ8IZU0 186 aa18.63■□□□□ 0.57
ATPAF2-208ENST00000496852 NBPF4Q96M43 638 aa18.63■□□□□ 0.57
ATPAF2-208ENST00000496852 ADAMTS8Q9UP79 889 aa18.63■□□□□ 0.57
ATPAF2-208ENST00000496852 CRB1P82279 1406 aa18.62■□□□□ 0.57
ATPAF2-208ENST00000496852 U2AF1L5P0DN76 240 aaPredicted RBP18.62■□□□□ 0.57
ATPAF2-208ENST00000496852 U2AF1Q01081 240 aaKnown RBP eCLIP18.62■□□□□ 0.57
ATPAF2-208ENST00000496852 STRN4Q9NRL3 753 aa18.62■□□□□ 0.57
ATPAF2-208ENST00000496852 PARP4Q9UKK3 1724 aaKnown RBP18.62■□□□□ 0.57
ATPAF2-208ENST00000496852 DLG5Q8TDM6 1919 aa18.61■□□□□ 0.57
ATPAF2-208ENST00000496852 CSB-PGBD3P0DP91 1061 aa18.61■□□□□ 0.57
ATPAF2-208ENST00000496852 EVA1CP58658 441 aa18.61■□□□□ 0.57
ATPAF2-208ENST00000496852 LARP1Q6PKG0 1096 aaKnown RBP18.6■□□□□ 0.57
ATPAF2-208ENST00000496852 ILDR1Q86SU0 546 aaPredicted RBP18.6■□□□□ 0.57
ATPAF2-208ENST00000496852 YTHDC1Q96MU7 727 aaKnown RBP18.6■□□□□ 0.57
ATPAF2-208ENST00000496852 VIRMAQ69YN4 1812 aaKnown RBP18.59■□□□□ 0.57
ATPAF2-208ENST00000496852 HMOX1P09601 288 aa18.59■□□□□ 0.57
ATPAF2-208ENST00000496852 SULT6B1Q6IMI4 303 aa18.59■□□□□ 0.57
ATPAF2-208ENST00000496852 AEBP1Q8IUX7 1158 aa18.59■□□□□ 0.57
ATPAF2-208ENST00000496852 UNC5CLQ8IV45 518 aa18.59■□□□□ 0.57
ATPAF2-208ENST00000496852 NLRP2Q9NX02 1062 aa18.59■□□□□ 0.57
ATPAF2-208ENST00000496852 PKD1L3Q7Z443 1732 aa18.58■□□□□ 0.57
ATPAF2-208ENST00000496852 AFF2P51816 1311 aa18.58■□□□□ 0.57
ATPAF2-208ENST00000496852 TOM1L2Q6ZVM7 507 aa18.58■□□□□ 0.57
ATPAF2-208ENST00000496852 USHBP1Q8N6Y0 703 aa18.58■□□□□ 0.57
ATPAF2-208ENST00000496852 RSPH6AQ9H0K4 717 aa18.58■□□□□ 0.57
ATPAF2-208ENST00000496852 FCHSD2O94868 740 aa18.57■□□□□ 0.56
ATPAF2-208ENST00000496852 CARD10Q9BWT7 1032 aa18.57■□□□□ 0.56
ATPAF2-208ENST00000496852 USP21Q9UK80 565 aa18.57■□□□□ 0.56
ATPAF2-208ENST00000496852 SHANK3Q9BYB0 1731 aa18.57■□□□□ 0.56
ATPAF2-208ENST00000496852 PLEKHF1Q96S99 279 aa18.55■□□□□ 0.56
ATPAF2-208ENST00000496852 GLI3P10071 1580 aa18.55■□□□□ 0.56
ATPAF2-208ENST00000496852 PRKAR2BP31323 418 aa18.54■□□□□ 0.56
ATPAF2-208ENST00000496852 VPS72Q15906 364 aa18.54■□□□□ 0.56
ATPAF2-208ENST00000496852 SPATA31A1Q5TZJ5 1347 aa18.54■□□□□ 0.56
ATPAF2-208ENST00000496852 SPATA31A5Q5VU36 1347 aa18.54■□□□□ 0.56
ATPAF2-208ENST00000496852 SPATA31A7Q8IWB4 1347 aa18.54■□□□□ 0.56
ATPAF2-208ENST00000496852 ATRNO75882 1429 aa18.54■□□□□ 0.56
ATPAF2-208ENST00000496852 MEGF6O75095 1541 aa18.54■□□□□ 0.56
ATPAF2-208ENST00000496852 CCDC146Q8IYE0 955 aa18.53■□□□□ 0.56
ATPAF2-208ENST00000496852 PNNQ9H307 717 aaKnown RBP18.53■□□□□ 0.56
ATPAF2-208ENST00000496852 RUNDC1Q96C34 613 aa18.52■□□□□ 0.56
ATPAF2-208ENST00000496852 DISP2A7MBM2 1401 aa18.52■□□□□ 0.56
ATPAF2-208ENST00000496852 PLEKHG2Q9H7P9 1386 aa18.51■□□□□ 0.55
ATPAF2-208ENST00000496852 USP35Q9P2H5 1018 aa18.51■□□□□ 0.55
ATPAF2-208ENST00000496852 LRRC37A3O60309 1634 aa18.5■□□□□ 0.55
ATPAF2-208ENST00000496852 THSD7AQ9UPZ6 1657 aa18.5■□□□□ 0.55
ATPAF2-208ENST00000496852 OVOS2A0A0G2JMS6 1433 aa18.5■□□□□ 0.55
ATPAF2-208ENST00000496852 TCP11L2Q8N4U5 519 aa18.5■□□□□ 0.55
ATPAF2-208ENST00000496852 PHACTR3Q96KR7 559 aa18.5■□□□□ 0.55
ATPAF2-208ENST00000496852 THRAP3Q9Y2W1 955 aaKnown RBP18.5■□□□□ 0.55
ATPAF2-208ENST00000496852 RAPGEF4Q8WZA2 1011 aa18.49■□□□□ 0.55
ATPAF2-208ENST00000496852 TRPC5Q9UL62 973 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms