RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 SLC12A5Q9H2X9 1139 aa20.21■□□□□ 0.83
VTI1A-209ENST00000496445 AXIN2Q9Y2T1 843 aa20.21■□□□□ 0.83
VTI1A-209ENST00000496445 THRAP3Q9Y2W1 955 aaKnown RBP20.21■□□□□ 0.83
VTI1A-209ENST00000496445 EDC4Q6P2E9 1401 aaKnown RBP20.2■□□□□ 0.82
VTI1A-209ENST00000496445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.2■□□□□ 0.82
VTI1A-209ENST00000496445 KCNH5Q8NCM2 988 aa20.2■□□□□ 0.82
VTI1A-209ENST00000496445 TMC1Q8TDI8 760 aa20.2■□□□□ 0.82
VTI1A-209ENST00000496445 SOX12O15370 315 aa20.19■□□□□ 0.82
VTI1A-209ENST00000496445 PUS7Q96PZ0 661 aaKnown RBP20.19■□□□□ 0.82
VTI1A-209ENST00000496445 BAG6P46379 1132 aa20.18■□□□□ 0.82
VTI1A-209ENST00000496445 NME9Q86XW9 330 aa20.18■□□□□ 0.82
VTI1A-209ENST00000496445 RREB1Q92766 1687 aa20.18■□□□□ 0.82
VTI1A-209ENST00000496445 WDR17Q8IZU2 1322 aa20.18■□□□□ 0.82
VTI1A-209ENST00000496445 OVOS2A0A0J9YW53 1432 aa20.18■□□□□ 0.82
VTI1A-209ENST00000496445 OVOS2Q6IE36 1432 aa20.18■□□□□ 0.82
VTI1A-209ENST00000496445 FAM196AQ6ZSG2 479 aa20.17■□□□□ 0.82
VTI1A-209ENST00000496445 SBF2Q86WG5 1849 aa20.17■□□□□ 0.82
VTI1A-209ENST00000496445 USP47Q96K76 1375 aa20.17■□□□□ 0.82
VTI1A-209ENST00000496445 EN1Q05925 392 aaPredicted RBP20.16■□□□□ 0.82
VTI1A-209ENST00000496445 HDGFL2Q7Z4V5 671 aaPredicted RBP20.16■□□□□ 0.82
VTI1A-209ENST00000496445 NINLQ9Y2I6 1382 aa20.16■□□□□ 0.82
VTI1A-209ENST00000496445 PDE3BQ13370 1112 aa20.15■□□□□ 0.82
VTI1A-209ENST00000496445 NUP188Q5SRE5 1749 aa20.14■□□□□ 0.81
VTI1A-209ENST00000496445 TRIM37O94972 964 aa20.14■□□□□ 0.81
VTI1A-209ENST00000496445 TOM1L2Q6ZVM7 507 aa20.14■□□□□ 0.81
VTI1A-209ENST00000496445 TERF2IPQ9NYB0 399 aa20.13■□□□□ 0.81
VTI1A-209ENST00000496445 MYOM1P52179 1685 aa20.13■□□□□ 0.81
VTI1A-209ENST00000496445 LRP5O75197 1615 aa20.13■□□□□ 0.81
VTI1A-209ENST00000496445 OVOS2A0A0G2JMS6 1433 aa20.11■□□□□ 0.81
VTI1A-209ENST00000496445 RGPD3A6NKT7 1758 aaPredicted RBP20.11■□□□□ 0.81
VTI1A-209ENST00000496445 RGPD4Q7Z3J3 1758 aa20.11■□□□□ 0.81
VTI1A-209ENST00000496445 EZH2Q15910 746 aaKnown RBP20.1■□□□□ 0.81
VTI1A-209ENST00000496445 CLSPNQ9HAW4 1339 aa20.09■□□□□ 0.81
VTI1A-209ENST00000496445 CAMKK2Q96RR4 588 aa20.09■□□□□ 0.81
VTI1A-209ENST00000496445 CARD10Q9BWT7 1032 aa20.09■□□□□ 0.81
VTI1A-209ENST00000496445 KIF20BQ96Q89 1820 aa20.09■□□□□ 0.81
VTI1A-209ENST00000496445 ANKRD36BQ8N2N9 1353 aa20.08■□□□□ 0.81
VTI1A-209ENST00000496445 CSB-PGBD3P0DP91 1061 aa20.08■□□□□ 0.81
VTI1A-209ENST00000496445 PCGF6Q9BYE7 350 aa20.08■□□□□ 0.81
VTI1A-209ENST00000496445 ERBB3P21860 1342 aa20.07■□□□□ 0.8
VTI1A-209ENST00000496445 FAM208AQ9UK61 1670 aaKnown RBP20.07■□□□□ 0.8
VTI1A-209ENST00000496445 PSDA5PKW4 1024 aaPredicted RBP20.07■□□□□ 0.8
VTI1A-209ENST00000496445 SLC24A1O60721 1099 aa20.07■□□□□ 0.8
VTI1A-209ENST00000496445 DDB1Q16531 1140 aa20.07■□□□□ 0.8
VTI1A-209ENST00000496445 PARD3Q8TEW0 1356 aa20.07■□□□□ 0.8
VTI1A-209ENST00000496445 CCDC7Q96M83 1385 aa20.07■□□□□ 0.8
VTI1A-209ENST00000496445 APBA3O96018 575 aa20.06■□□□□ 0.8
VTI1A-209ENST00000496445 TNS2Q63HR2 1409 aa20.05■□□□□ 0.8
VTI1A-209ENST00000496445 TMF1P82094 1093 aa20.05■□□□□ 0.8
VTI1A-209ENST00000496445 TIMELESSQ9UNS1 1208 aa20.05■□□□□ 0.8
VTI1A-209ENST00000496445 BCL9O00512 1426 aa20.04■□□□□ 0.8
VTI1A-209ENST00000496445 CDCA7Q9BWT1 371 aaPredicted RBP20.04■□□□□ 0.8
VTI1A-209ENST00000496445 RGPD2P0DJD1 1756 aa20.03■□□□□ 0.8
VTI1A-209ENST00000496445 MARCH10Q8NA82 808 aaPredicted RBP20.03■□□□□ 0.8
VTI1A-209ENST00000496445 NHSQ6T4R5 1651 aa20.01■□□□□ 0.79
VTI1A-209ENST00000496445 C11orf95C9JLR9 678 aaPredicted RBP20.01■□□□□ 0.79
VTI1A-209ENST00000496445 ANKRD24Q8TF21 1146 aa20.01■□□□□ 0.79
VTI1A-209ENST00000496445 R3HDM1Q15032 1099 aaKnown RBP20■□□□□ 0.79
VTI1A-209ENST00000496445 PTF1AQ7RTS3 328 aa19.99■□□□□ 0.79
VTI1A-209ENST00000496445 COG3Q96JB2 828 aa19.99■□□□□ 0.79
VTI1A-209ENST00000496445 MAP3K19Q56UN5 1328 aa19.99■□□□□ 0.79
VTI1A-209ENST00000496445 FBLN1P23142 703 aa19.98■□□□□ 0.79
VTI1A-209ENST00000496445 IP6K1Q92551 441 aa19.98■□□□□ 0.79
VTI1A-209ENST00000496445 NLRP2Q9NX02 1062 aa19.98■□□□□ 0.79
VTI1A-209ENST00000496445 SHANK3Q9BYB0 1731 aa19.98■□□□□ 0.79
VTI1A-209ENST00000496445 EXOC5O00471 708 aa19.96■□□□□ 0.79
VTI1A-209ENST00000496445 CDCA8Q53HL2 280 aa19.96■□□□□ 0.79
VTI1A-209ENST00000496445 FYB1O15117 783 aa19.95■□□□□ 0.78
VTI1A-209ENST00000496445 BCL11BQ9C0K0 894 aaPredicted RBP19.95■□□□□ 0.78
VTI1A-209ENST00000496445 GGNBP2Q9H3C7 697 aa19.95■□□□□ 0.78
VTI1A-209ENST00000496445 RTL1A6NKG5 1358 aa19.95■□□□□ 0.78
VTI1A-209ENST00000496445 IL2RBP14784 551 aa19.94■□□□□ 0.78
VTI1A-209ENST00000496445 HOXC9P31274 260 aa19.94■□□□□ 0.78
VTI1A-209ENST00000496445 NSD3Q9BZ95 1437 aa19.93■□□□□ 0.78
VTI1A-209ENST00000496445 BTAF1O14981 1849 aa19.93■□□□□ 0.78
VTI1A-209ENST00000496445 ANKRD26Q9UPS8 1709 aa19.93■□□□□ 0.78
VTI1A-209ENST00000496445 PLSCR1O15162 318 aa19.92■□□□□ 0.78
VTI1A-209ENST00000496445 RRS1Q15050 365 aaKnown RBP19.92■□□□□ 0.78
VTI1A-209ENST00000496445 LTV1Q96GA3 475 aaPredicted RBP19.92■□□□□ 0.78
VTI1A-209ENST00000496445 CASZ1Q86V15 1759 aa19.91■□□□□ 0.78
VTI1A-209ENST00000496445 CARD14Q9BXL6 1004 aa19.91■□□□□ 0.78
VTI1A-209ENST00000496445 AMPHP49418 695 aa19.9■□□□□ 0.78
VTI1A-209ENST00000496445 CCER1Q8TC90 406 aaPredicted RBP19.9■□□□□ 0.78
VTI1A-209ENST00000496445 DOT1LQ8TEK3 1739 aa19.9■□□□□ 0.78
VTI1A-209ENST00000496445 MEGF6O75095 1541 aa19.89■□□□□ 0.77
VTI1A-209ENST00000496445 KCNQ2O43526 872 aa19.88■□□□□ 0.77
VTI1A-209ENST00000496445 NBPF14Q5TI25 921 aa19.88■□□□□ 0.77
VTI1A-209ENST00000496445 PROM2Q8N271 834 aa19.88■□□□□ 0.77
VTI1A-209ENST00000496445 ANO8Q9HCE9 1232 aaPredicted RBP19.88■□□□□ 0.77
VTI1A-209ENST00000496445 PAPPAQ13219 1627 aa19.87■□□□□ 0.77
VTI1A-209ENST00000496445 ACSBG1Q96GR2 724 aa19.87■□□□□ 0.77
VTI1A-209ENST00000496445 MAP2P11137 1827 aaKnown RBP19.85■□□□□ 0.77
VTI1A-209ENST00000496445 KAT6BQ8WYB5 2073 aa19.85■□□□□ 0.77
VTI1A-209ENST00000496445 FLT4P35916 1363 aa19.84■□□□□ 0.77
VTI1A-209ENST00000496445 HSPA5P11021 654 aaKnown RBP19.84■□□□□ 0.77
VTI1A-209ENST00000496445 SMG6Q86US8 1419 aaKnown RBP19.84■□□□□ 0.77
VTI1A-209ENST00000496445 INSRP06213 1382 aa19.83■□□□□ 0.77
VTI1A-209ENST00000496445 KIF24Q5T7B8 1368 aa19.83■□□□□ 0.77
VTI1A-209ENST00000496445 EIF4G2P78344 907 aaKnown RBP eCLIP19.82■□□□□ 0.76
VTI1A-209ENST00000496445 TXNRD1Q16881 649 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms