RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 ZNF692Q9BU19 519 aaPredicted RBP18.6■□□□□ 0.57
USF1-207ENST00000496363 KTN1Q86UP2 1357 aaKnown RBP18.59■□□□□ 0.57
USF1-207ENST00000496363 ARHGEF25Q86VW2 580 aa18.59■□□□□ 0.57
USF1-207ENST00000496363 WDR17Q8IZU2 1322 aa18.58■□□□□ 0.57
USF1-207ENST00000496363 TTC21AQ8NDW8 1320 aa18.58■□□□□ 0.57
USF1-207ENST00000496363 OVOS2A0A0G2JMS6 1433 aa18.57■□□□□ 0.56
USF1-207ENST00000496363 OVOS2A0A0J9YW53 1432 aa18.57■□□□□ 0.56
USF1-207ENST00000496363 OVOS2Q6IE36 1432 aa18.57■□□□□ 0.56
USF1-207ENST00000496363 CARD11Q9BXL7 1154 aa18.57■□□□□ 0.56
USF1-207ENST00000496363 CD163L1Q9NR16 1453 aa18.57■□□□□ 0.56
USF1-207ENST00000496363 SBNO2Q9Y2G9 1366 aa18.56■□□□□ 0.56
USF1-207ENST00000496363 DDB1Q16531 1140 aa18.56■□□□□ 0.56
USF1-207ENST00000496363 KCNH5Q8NCM2 988 aa18.56■□□□□ 0.56
USF1-207ENST00000496363 USP54Q70EL1 1684 aa18.56■□□□□ 0.56
USF1-207ENST00000496363 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.55■□□□□ 0.56
USF1-207ENST00000496363 LTN1O94822 1766 aa18.55■□□□□ 0.56
USF1-207ENST00000496363 TONSLQ96HA7 1378 aa18.54■□□□□ 0.56
USF1-207ENST00000496363 RGPD3A6NKT7 1758 aaPredicted RBP18.53■□□□□ 0.56
USF1-207ENST00000496363 RGPD4Q7Z3J3 1758 aa18.53■□□□□ 0.56
USF1-207ENST00000496363 CSB-PGBD3P0DP91 1061 aa18.53■□□□□ 0.56
USF1-207ENST00000496363 PTF1AQ7RTS3 328 aa18.53■□□□□ 0.56
USF1-207ENST00000496363 NME9Q86XW9 330 aa18.52■□□□□ 0.56
USF1-207ENST00000496363 MARCH10Q8NA82 808 aaPredicted RBP18.52■□□□□ 0.56
USF1-207ENST00000496363 TMC1Q8TDI8 760 aa18.52■□□□□ 0.56
USF1-207ENST00000496363 ABCC6O95255 1503 aa18.51■□□□□ 0.55
USF1-207ENST00000496363 CARD10Q9BWT7 1032 aa18.51■□□□□ 0.55
USF1-207ENST00000496363 USP31Q70CQ4 1352 aa18.51■□□□□ 0.55
USF1-207ENST00000496363 C11orf95C9JLR9 678 aaPredicted RBP18.5■□□□□ 0.55
USF1-207ENST00000496363 NBPF14Q5TI25 921 aa18.5■□□□□ 0.55
USF1-207ENST00000496363 SLC12A5Q9H2X9 1139 aa18.5■□□□□ 0.55
USF1-207ENST00000496363 CDCA7Q9BWT1 371 aaPredicted RBP18.49■□□□□ 0.55
USF1-207ENST00000496363 A0A1W2PP64 1363 aa18.47■□□□□ 0.55
USF1-207ENST00000496363 HDGFL2Q7Z4V5 671 aaPredicted RBP18.47■□□□□ 0.55
USF1-207ENST00000496363 BCL11BQ9C0K0 894 aaPredicted RBP18.47■□□□□ 0.55
USF1-207ENST00000496363 CCDC7Q96M83 1385 aa18.46■□□□□ 0.55
USF1-207ENST00000496363 BCL9O00512 1426 aa18.46■□□□□ 0.55
USF1-207ENST00000496363 TNS2Q63HR2 1409 aa18.46■□□□□ 0.55
USF1-207ENST00000496363 EDC4Q6P2E9 1401 aaKnown RBP18.46■□□□□ 0.55
USF1-207ENST00000496363 PLSCR1O15162 318 aa18.45■□□□□ 0.54
USF1-207ENST00000496363 ANO8Q9HCE9 1232 aaPredicted RBP18.45■□□□□ 0.54
USF1-207ENST00000496363 EXOC5O00471 708 aa18.44■□□□□ 0.54
USF1-207ENST00000496363 CASZ1Q86V15 1759 aa18.44■□□□□ 0.54
USF1-207ENST00000496363 ERBB3P21860 1342 aa18.44■□□□□ 0.54
USF1-207ENST00000496363 PROM2Q8N271 834 aa18.43■□□□□ 0.54
USF1-207ENST00000496363 NLRP2Q9NX02 1062 aa18.43■□□□□ 0.54
USF1-207ENST00000496363 NHSQ6T4R5 1651 aa18.43■□□□□ 0.54
USF1-207ENST00000496363 KAT6BQ8WYB5 2073 aa18.43■□□□□ 0.54
USF1-207ENST00000496363 TESK2Q96S53 571 aa18.42■□□□□ 0.54
USF1-207ENST00000496363 TERF2IPQ9NYB0 399 aa18.42■□□□□ 0.54
USF1-207ENST00000496363 ST20-MTHFSA0A0A6YYL1 179 aa18.41■□□□□ 0.54
USF1-207ENST00000496363 ANKRD24Q8TF21 1146 aa18.41■□□□□ 0.54
USF1-207ENST00000496363 KCNQ2O43526 872 aa18.4■□□□□ 0.54
USF1-207ENST00000496363 PUS7Q96PZ0 661 aaKnown RBP18.39■□□□□ 0.53
USF1-207ENST00000496363 PDGFDQ9GZP0 370 aaPredicted RBP18.39■□□□□ 0.53
USF1-207ENST00000496363 SPON1Q9HCB6 807 aa18.39■□□□□ 0.53
USF1-207ENST00000496363 BTAF1O14981 1849 aa18.38■□□□□ 0.53
USF1-207ENST00000496363 IL2RBP14784 551 aa18.38■□□□□ 0.53
USF1-207ENST00000496363 TXNRD1Q16881 649 aa18.38■□□□□ 0.53
USF1-207ENST00000496363 ACSBG1Q96GR2 724 aa18.38■□□□□ 0.53
USF1-207ENST00000496363 RGPD2P0DJD1 1756 aa18.37■□□□□ 0.53
USF1-207ENST00000496363 PPP1R1BQ9UD71 204 aaPredicted RBP18.37■□□□□ 0.53
USF1-207ENST00000496363 FAM208AQ9UK61 1670 aaKnown RBP18.37■□□□□ 0.53
USF1-207ENST00000496363 LTV1Q96GA3 475 aaPredicted RBP18.36■□□□□ 0.53
USF1-207ENST00000496363 NINLQ9Y2I6 1382 aa18.36■□□□□ 0.53
USF1-207ENST00000496363 FBLN1P23142 703 aa18.35■□□□□ 0.53
USF1-207ENST00000496363 IP6K1Q92551 441 aa18.35■□□□□ 0.53
USF1-207ENST00000496363 MYOM1P52179 1685 aa18.34■□□□□ 0.53
USF1-207ENST00000496363 ZBTB7AO95365 584 aa18.33■□□□□ 0.52
USF1-207ENST00000496363 COG3Q96JB2 828 aa18.33■□□□□ 0.52
USF1-207ENST00000496363 STK32BQ9NY57 414 aa18.33■□□□□ 0.52
USF1-207ENST00000496363 MAP3K19Q56UN5 1328 aa18.32■□□□□ 0.52
USF1-207ENST00000496363 PAPPAQ13219 1627 aa18.32■□□□□ 0.52
USF1-207ENST00000496363 TRIM26Q12899 539 aaPredicted RBP18.32■□□□□ 0.52
USF1-207ENST00000496363 ANKRD36BQ8N2N9 1353 aa18.31■□□□□ 0.52
USF1-207ENST00000496363 USP47Q96K76 1375 aa18.31■□□□□ 0.52
USF1-207ENST00000496363 SLC15A2Q16348 729 aa18.31■□□□□ 0.52
USF1-207ENST00000496363 SHANK3Q9BYB0 1731 aa18.31■□□□□ 0.52
USF1-207ENST00000496363 HOXC9P31274 260 aa18.3■□□□□ 0.52
USF1-207ENST00000496363 KIF20BQ96Q89 1820 aa18.3■□□□□ 0.52
USF1-207ENST00000496363 DOT1LQ8TEK3 1739 aa18.29■□□□□ 0.52
USF1-207ENST00000496363 ATF5Q9Y2D1 282 aaPredicted RBP18.29■□□□□ 0.52
USF1-207ENST00000496363 AMPHP49418 695 aa18.28■□□□□ 0.52
USF1-207ENST00000496363 DDX54Q8TDD1 881 aaKnown RBP18.28■□□□□ 0.52
USF1-207ENST00000496363 PTGER2P43116 358 aa18.27■□□□□ 0.52
USF1-207ENST00000496363 TMF1P82094 1093 aa18.27■□□□□ 0.52
USF1-207ENST00000496363 RRS1Q15050 365 aaKnown RBP18.27■□□□□ 0.52
USF1-207ENST00000496363 GGNBP2Q9H3C7 697 aa18.27■□□□□ 0.52
USF1-207ENST00000496363 MEGF6O75095 1541 aa18.27■□□□□ 0.51
USF1-207ENST00000496363 SLC24A1O60721 1099 aa18.26■□□□□ 0.51
USF1-207ENST00000496363 FYB1O15117 783 aa18.25■□□□□ 0.51
USF1-207ENST00000496363 ZNF827Q17R98 1081 aa18.25■□□□□ 0.51
USF1-207ENST00000496363 LRRC4BQ9NT99 713 aa18.25■□□□□ 0.51
USF1-207ENST00000496363 UTRNP46939 3433 aa18.24■□□□□ 0.51
USF1-207ENST00000496363 RTL1A6NKG5 1358 aa18.24■□□□□ 0.51
USF1-207ENST00000496363 TUBGCP6Q96RT7 1819 aa18.23■□□□□ 0.51
USF1-207ENST00000496363 YY1P25490 414 aa18.23■□□□□ 0.51
USF1-207ENST00000496363 USHBP1Q8N6Y0 703 aa18.23■□□□□ 0.51
USF1-207ENST00000496363 NBPF6Q5VWK0 638 aa18.22■□□□□ 0.51
USF1-207ENST00000496363 NBPF4Q96M43 638 aa18.22■□□□□ 0.51
USF1-207ENST00000496363 MTFR1LQ9H019 292 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms