RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 LTN1O94822 1766 aa28.83■■■□□ 2.21
COL9A2-211ENST00000496215 USP35Q9P2H5 1018 aa28.83■■■□□ 2.21
COL9A2-211ENST00000496215 EVA1CP58658 441 aa28.82■■■□□ 2.2
COL9A2-211ENST00000496215 OVOS2A0A0J9YW53 1432 aa28.82■■■□□ 2.2
COL9A2-211ENST00000496215 OVOS2Q6IE36 1432 aa28.82■■■□□ 2.2
COL9A2-211ENST00000496215 BLMP54132 1417 aaPredicted RBP28.81■■■□□ 2.2
COL9A2-211ENST00000496215 FAM182BQ5T319 152 aa28.81■■■□□ 2.2
COL9A2-211ENST00000496215 CRB1P82279 1406 aa28.79■■■□□ 2.2
COL9A2-211ENST00000496215 KIF20BQ96Q89 1820 aa28.79■■■□□ 2.2
COL9A2-211ENST00000496215 BARGINQ6ZT62 677 aa28.78■■■□□ 2.2
COL9A2-211ENST00000496215 WNK3Q9BYP7 1800 aa28.78■■■□□ 2.2
COL9A2-211ENST00000496215 EIF4G2P78344 907 aaKnown RBP eCLIP28.77■■■□□ 2.2
COL9A2-211ENST00000496215 PARP4Q9UKK3 1724 aaKnown RBP28.77■■■□□ 2.2
COL9A2-211ENST00000496215 CCDC125Q86Z20 511 aa28.76■■■□□ 2.19
COL9A2-211ENST00000496215 TCP11L2Q8N4U5 519 aa28.75■■■□□ 2.19
COL9A2-211ENST00000496215 TNS1Q9HBL0 1735 aaKnown RBP28.73■■■□□ 2.19
COL9A2-211ENST00000496215 WDR17Q8IZU2 1322 aa28.72■■■□□ 2.19
COL9A2-211ENST00000496215 HSPA5P11021 654 aaKnown RBP28.72■■■□□ 2.19
COL9A2-211ENST00000496215 LRRC37A3O60309 1634 aa28.72■■■□□ 2.19
COL9A2-211ENST00000496215 DEFB132Q7Z7B7 95 aa28.71■■■□□ 2.19
COL9A2-211ENST00000496215 RGPD1P0DJD0 1748 aa28.71■■■□□ 2.19
COL9A2-211ENST00000496215 THRAP3Q9Y2W1 955 aaKnown RBP28.7■■■□□ 2.18
COL9A2-211ENST00000496215 COG3Q96JB2 828 aa28.68■■■□□ 2.18
COL9A2-211ENST00000496215 TOM1L2Q6ZVM7 507 aa28.67■■■□□ 2.18
COL9A2-211ENST00000496215 NSD3Q9BZ95 1437 aa28.66■■■□□ 2.18
COL9A2-211ENST00000496215 PEAK1Q9H792 1746 aa28.66■■■□□ 2.18
COL9A2-211ENST00000496215 FAM208AQ9UK61 1670 aaKnown RBP28.64■■■□□ 2.18
COL9A2-211ENST00000496215 DISP2A7MBM2 1401 aa28.64■■■□□ 2.18
COL9A2-211ENST00000496215 POLR3GLQ9BT43 218 aa28.64■■■□□ 2.18
COL9A2-211ENST00000496215 CSB-PGBD3P0DP91 1061 aa28.63■■■□□ 2.17
COL9A2-211ENST00000496215 FBLN1P23142 703 aa28.62■■■□□ 2.17
COL9A2-211ENST00000496215 ERBB3P21860 1342 aa28.62■■■□□ 2.17
COL9A2-211ENST00000496215 CARD10Q9BWT7 1032 aa28.61■■■□□ 2.17
COL9A2-211ENST00000496215 CARD14Q9BXL6 1004 aa28.61■■■□□ 2.17
COL9A2-211ENST00000496215 FYB1O15117 783 aa28.6■■■□□ 2.17
COL9A2-211ENST00000496215 PDE3BQ13370 1112 aa28.59■■■□□ 2.17
COL9A2-211ENST00000496215 SF3B2Q13435 895 aaKnown RBP28.59■■■□□ 2.17
COL9A2-211ENST00000496215 GGNBP2Q9H3C7 697 aa28.59■■■□□ 2.17
COL9A2-211ENST00000496215 SRCAPQ6ZRS2 3230 aa28.59■■■□□ 2.17
COL9A2-211ENST00000496215 FAM196AQ6ZSG2 479 aa28.58■■■□□ 2.17
COL9A2-211ENST00000496215 ANKRD26Q9UPS8 1709 aa28.57■■■□□ 2.16
COL9A2-211ENST00000496215 CCDC7Q96M83 1385 aa28.57■■■□□ 2.16
COL9A2-211ENST00000496215 TRIM37O94972 964 aa28.56■■■□□ 2.16
COL9A2-211ENST00000496215 MAP3K19Q56UN5 1328 aa28.56■■■□□ 2.16
COL9A2-211ENST00000496215 SBF2Q86WG5 1849 aa28.55■■■□□ 2.16
COL9A2-211ENST00000496215 RTL1A6NKG5 1358 aa28.55■■■□□ 2.16
COL9A2-211ENST00000496215 ANKRD24Q8TF21 1146 aa28.54■■■□□ 2.16
COL9A2-211ENST00000496215 BAG6P46379 1132 aa28.53■■■□□ 2.16
COL9A2-211ENST00000496215 EN1Q05925 392 aaPredicted RBP28.53■■■□□ 2.16
COL9A2-211ENST00000496215 IP6K1Q92551 441 aa28.53■■■□□ 2.16
COL9A2-211ENST00000496215 RGPD2P0DJD1 1756 aa28.52■■■□□ 2.16
COL9A2-211ENST00000496215 DDB1Q16531 1140 aa28.52■■■□□ 2.16
COL9A2-211ENST00000496215 CDCA7Q9BWT1 371 aaPredicted RBP28.52■■■□□ 2.16
COL9A2-211ENST00000496215 OVOS2A0A0G2JMS6 1433 aa28.52■■■□□ 2.16
COL9A2-211ENST00000496215 CGNL1Q0VF96 1302 aa28.51■■■□□ 2.15
COL9A2-211ENST00000496215 MARCH10Q8NA82 808 aaPredicted RBP28.5■■■□□ 2.15
COL9A2-211ENST00000496215 NLRP2Q9NX02 1062 aa28.5■■■□□ 2.15
COL9A2-211ENST00000496215 C11orf95C9JLR9 678 aaPredicted RBP28.49■■■□□ 2.15
COL9A2-211ENST00000496215 HOXC9P31274 260 aa28.49■■■□□ 2.15
COL9A2-211ENST00000496215 AMPHP49418 695 aa28.49■■■□□ 2.15
COL9A2-211ENST00000496215 RRS1Q15050 365 aaKnown RBP28.49■■■□□ 2.15
COL9A2-211ENST00000496215 TNS2Q63HR2 1409 aa28.48■■■□□ 2.15
COL9A2-211ENST00000496215 RREB1Q92766 1687 aa28.48■■■□□ 2.15
COL9A2-211ENST00000496215 SMG6Q86US8 1419 aaKnown RBP28.45■■■□□ 2.15
COL9A2-211ENST00000496215 EZH2Q15910 746 aaKnown RBP28.45■■■□□ 2.14
COL9A2-211ENST00000496215 PTF1AQ7RTS3 328 aa28.45■■■□□ 2.14
COL9A2-211ENST00000496215 LTV1Q96GA3 475 aaPredicted RBP28.45■■■□□ 2.14
COL9A2-211ENST00000496215 CAMKK2Q96RR4 588 aa28.45■■■□□ 2.14
COL9A2-211ENST00000496215 KIF24Q5T7B8 1368 aa28.44■■■□□ 2.14
COL9A2-211ENST00000496215 FLT4P35916 1363 aa28.43■■■□□ 2.14
COL9A2-211ENST00000496215 APBA3O96018 575 aa28.43■■■□□ 2.14
COL9A2-211ENST00000496215 NUP188Q5SRE5 1749 aa28.43■■■□□ 2.14
COL9A2-211ENST00000496215 BCL9O00512 1426 aa28.43■■■□□ 2.14
COL9A2-211ENST00000496215 KIF7Q2M1P5 1343 aa28.43■■■□□ 2.14
COL9A2-211ENST00000496215 PANK3Q9H999 370 aa28.42■■■□□ 2.14
COL9A2-211ENST00000496215 NSD2O96028 1365 aa28.39■■■□□ 2.14
COL9A2-211ENST00000496215 EXOC5O00471 708 aa28.39■■■□□ 2.14
COL9A2-211ENST00000496215 IL2RBP14784 551 aa28.39■■■□□ 2.14
COL9A2-211ENST00000496215 SHANK3Q9BYB0 1731 aa28.38■■■□□ 2.13
COL9A2-211ENST00000496215 RGPD3A6NKT7 1758 aaPredicted RBP28.38■■■□□ 2.13
COL9A2-211ENST00000496215 RGPD4Q7Z3J3 1758 aa28.38■■■□□ 2.13
COL9A2-211ENST00000496215 MAP2P11137 1827 aaKnown RBP28.38■■■□□ 2.13
COL9A2-211ENST00000496215 INSRP06213 1382 aa28.37■■■□□ 2.13
COL9A2-211ENST00000496215 HSP90AB2PQ58FF8 381 aa28.36■■■□□ 2.13
COL9A2-211ENST00000496215 EMILIN1Q9Y6C2 1016 aa28.36■■■□□ 2.13
COL9A2-211ENST00000496215 PARD3Q8TEW0 1356 aa28.36■■■□□ 2.13
COL9A2-211ENST00000496215 NHSQ6T4R5 1651 aa28.35■■■□□ 2.13
COL9A2-211ENST00000496215 MEGF6O75095 1541 aa28.35■■■□□ 2.13
COL9A2-211ENST00000496215 PSDA5PKW4 1024 aaPredicted RBP28.35■■■□□ 2.13
COL9A2-211ENST00000496215 NBPF6Q5VWK0 638 aa28.33■■■□□ 2.13
COL9A2-211ENST00000496215 NBPF4Q96M43 638 aa28.33■■■□□ 2.13
COL9A2-211ENST00000496215 BCL11BQ9C0K0 894 aaPredicted RBP28.32■■■□□ 2.12
COL9A2-211ENST00000496215 USHBP1Q8N6Y0 703 aa28.31■■■□□ 2.12
COL9A2-211ENST00000496215 KNSTRNQ9Y448 316 aa28.3■■■□□ 2.12
COL9A2-211ENST00000496215 PPM1GO15355 546 aaPredicted RBP28.29■■■□□ 2.12
COL9A2-211ENST00000496215 KCNQ2O43526 872 aa28.29■■■□□ 2.12
COL9A2-211ENST00000496215 TNNT2P45379 298 aaPredicted RBP28.28■■■□□ 2.12
COL9A2-211ENST00000496215 R3HDM1Q15032 1099 aaKnown RBP28.27■■■□□ 2.12
COL9A2-211ENST00000496215 BTAF1O14981 1849 aa28.25■■■□□ 2.11
COL9A2-211ENST00000496215 PLSCR1O15162 318 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms