RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 LMO7Q8WWI1 1683 aa13.16□□□□□ -0.3
PRPF3-207ENST00000496202 PER1O15534 1290 aaPredicted RBP13.16□□□□□ -0.3
PRPF3-207ENST00000496202 UNC5CLQ8IV45 518 aa13.16□□□□□ -0.3
PRPF3-207ENST00000496202 NPC1L1Q9UHC9 1359 aa13.16□□□□□ -0.3
PRPF3-207ENST00000496202 NRAPQ86VF7 1730 aa13.16□□□□□ -0.3
PRPF3-207ENST00000496202 MAP2P11137 1827 aaKnown RBP13.16□□□□□ -0.3
PRPF3-207ENST00000496202 RGPD5Q99666 1765 aa13.15□□□□□ -0.3
PRPF3-207ENST00000496202 AMPHP49418 695 aa13.15□□□□□ -0.3
PRPF3-207ENST00000496202 EVA1CP58658 441 aa13.15□□□□□ -0.3
PRPF3-207ENST00000496202 CCDC9Q9Y3X0 531 aaKnown RBP13.15□□□□□ -0.3
PRPF3-207ENST00000496202 COL18A1P39060 1754 aa13.15□□□□□ -0.31
PRPF3-207ENST00000496202 MAP3K19Q56UN5 1328 aa13.14□□□□□ -0.31
PRPF3-207ENST00000496202 RRS1Q15050 365 aaKnown RBP13.14□□□□□ -0.31
PRPF3-207ENST00000496202 STRN4Q9NRL3 753 aa13.14□□□□□ -0.31
PRPF3-207ENST00000496202 TRPC5Q9UL62 973 aaPredicted RBP13.14□□□□□ -0.31
PRPF3-207ENST00000496202 RTL1A6NKG5 1358 aa13.14□□□□□ -0.31
PRPF3-207ENST00000496202 BCL9LQ86UU0 1499 aa13.14□□□□□ -0.31
PRPF3-207ENST00000496202 CAMTA1Q9Y6Y1 1673 aa13.14□□□□□ -0.31
PRPF3-207ENST00000496202 PPM1GO15355 546 aaPredicted RBP13.13□□□□□ -0.31
PRPF3-207ENST00000496202 FBLN1P23142 703 aa13.13□□□□□ -0.31
PRPF3-207ENST00000496202 QTRT2Q9H974 415 aaKnown RBP13.13□□□□□ -0.31
PRPF3-207ENST00000496202 COL5A2P05997 1499 aaPredicted RBP13.12□□□□□ -0.31
PRPF3-207ENST00000496202 CSB-PGBD3P0DP91 1061 aa13.12□□□□□ -0.31
PRPF3-207ENST00000496202 RGS17Q9UGC6 210 aaPredicted RBP13.12□□□□□ -0.31
PRPF3-207ENST00000496202 ATRNO75882 1429 aa13.12□□□□□ -0.31
PRPF3-207ENST00000496202 BLMP54132 1417 aaPredicted RBP13.12□□□□□ -0.31
PRPF3-207ENST00000496202 FLT4P35916 1363 aa13.11□□□□□ -0.31
PRPF3-207ENST00000496202 KIF24Q5T7B8 1368 aa13.11□□□□□ -0.31
PRPF3-207ENST00000496202 VPS72Q15906 364 aa13.11□□□□□ -0.31
PRPF3-207ENST00000496202 IP6K1Q92551 441 aa13.11□□□□□ -0.31
PRPF3-207ENST00000496202 EMILIN1Q9Y6C2 1016 aa13.11□□□□□ -0.31
PRPF3-207ENST00000496202 SMG6Q86US8 1419 aaKnown RBP13.11□□□□□ -0.31
PRPF3-207ENST00000496202 FAM208AQ9UK61 1670 aaKnown RBP13.1□□□□□ -0.31
PRPF3-207ENST00000496202 HOXC9P31274 260 aa13.1□□□□□ -0.31
PRPF3-207ENST00000496202 POTEAQ6S8J7 498 aa13.1□□□□□ -0.31
PRPF3-207ENST00000496202 LTV1Q96GA3 475 aaPredicted RBP13.1□□□□□ -0.31
PRPF3-207ENST00000496202 PEAK1Q9H792 1746 aa13.1□□□□□ -0.31
PRPF3-207ENST00000496202 RXRBP28702 533 aa13.09□□□□□ -0.31
PRPF3-207ENST00000496202 RBM6P78332 1123 aaKnown RBP13.09□□□□□ -0.31
PRPF3-207ENST00000496202 LARP1Q6PKG0 1096 aaKnown RBP13.09□□□□□ -0.31
PRPF3-207ENST00000496202 TOM1L2Q6ZVM7 507 aa13.09□□□□□ -0.31
PRPF3-207ENST00000496202 ANKRD24Q8TF21 1146 aa13.09□□□□□ -0.31
PRPF3-207ENST00000496202 POLKQ9UBT6 870 aa13.09□□□□□ -0.31
PRPF3-207ENST00000496202 AXIN2Q9Y2T1 843 aa13.09□□□□□ -0.31
PRPF3-207ENST00000496202 WDR17Q8IZU2 1322 aa13.09□□□□□ -0.31
PRPF3-207ENST00000496202 CRB1P82279 1406 aa13.08□□□□□ -0.32
PRPF3-207ENST00000496202 GJD4Q96KN9 370 aaPredicted RBP13.08□□□□□ -0.32
PRPF3-207ENST00000496202 CDK12Q9NYV4 1490 aaPredicted RBP13.08□□□□□ -0.32
PRPF3-207ENST00000496202 ERBB3P21860 1342 aa13.08□□□□□ -0.32
PRPF3-207ENST00000496202 SPATA31A5Q5VU36 1347 aa13.08□□□□□ -0.32
PRPF3-207ENST00000496202 SPATA31A7Q8IWB4 1347 aa13.08□□□□□ -0.32
PRPF3-207ENST00000496202 INSRP06213 1382 aa13.07□□□□□ -0.32
PRPF3-207ENST00000496202 A0A0G2JS52 829 aa13.07□□□□□ -0.32
PRPF3-207ENST00000496202 MYT1Q01538 1121 aa13.07□□□□□ -0.32
PRPF3-207ENST00000496202 NLRP2Q9NX02 1062 aa13.07□□□□□ -0.32
PRPF3-207ENST00000496202 USP35Q9P2H5 1018 aa13.07□□□□□ -0.32
PRPF3-207ENST00000496202 GLI3P10071 1580 aa13.07□□□□□ -0.32
PRPF3-207ENST00000496202 HSP90AB2PQ58FF8 381 aa13.06□□□□□ -0.32
PRPF3-207ENST00000496202 SPATA31A1Q5TZJ5 1347 aa13.06□□□□□ -0.32
PRPF3-207ENST00000496202 TCP11L2Q8N4U5 519 aa13.05□□□□□ -0.32
PRPF3-207ENST00000496202 PARD3Q8TEW0 1356 aa13.05□□□□□ -0.32
PRPF3-207ENST00000496202 MTHFSP49914 203 aa13.04□□□□□ -0.32
PRPF3-207ENST00000496202 RALBP1Q15311 655 aa13.04□□□□□ -0.32
PRPF3-207ENST00000496202 FAM98CQ17RN3 349 aaKnown RBP13.04□□□□□ -0.32
PRPF3-207ENST00000496202 CFAP53Q96M91 514 aa13.04□□□□□ -0.32
PRPF3-207ENST00000496202 CARD10Q9BWT7 1032 aa13.04□□□□□ -0.32
PRPF3-207ENST00000496202 RGPD2P0DJD1 1756 aa13.04□□□□□ -0.32
PRPF3-207ENST00000496202 PPP2R1AP30153 589 aa13.03□□□□□ -0.32
PRPF3-207ENST00000496202 THRAP3Q9Y2W1 955 aaKnown RBP13.03□□□□□ -0.32
PRPF3-207ENST00000496202 WNK3Q9BYP7 1800 aa13.03□□□□□ -0.32
PRPF3-207ENST00000496202 RGS12O14924 1447 aa13.02□□□□□ -0.33
PRPF3-207ENST00000496202 EIF4A2Q14240 407 aaKnown RBP13.01□□□□□ -0.33
PRPF3-207ENST00000496202 BARGINQ6ZT62 677 aa13.01□□□□□ -0.33
PRPF3-207ENST00000496202 THSD7AQ9UPZ6 1657 aa13□□□□□ -0.33
PRPF3-207ENST00000496202 MYBBP1AQ9BQG0 1328 aaKnown RBP13□□□□□ -0.33
PRPF3-207ENST00000496202 ANP32CO43423 234 aa13□□□□□ -0.33
PRPF3-207ENST00000496202 CDCA7Q9BWT1 371 aaPredicted RBP13□□□□□ -0.33
PRPF3-207ENST00000496202 DIAPH1O60610 1272 aaKnown RBP12.99□□□□□ -0.33
PRPF3-207ENST00000496202 NBPF6Q5VWK0 638 aa12.99□□□□□ -0.33
PRPF3-207ENST00000496202 SEPT12Q8IYM1 358 aa12.99□□□□□ -0.33
PRPF3-207ENST00000496202 USHBP1Q8N6Y0 703 aa12.99□□□□□ -0.33
PRPF3-207ENST00000496202 NBPF4Q96M43 638 aa12.99□□□□□ -0.33
PRPF3-207ENST00000496202 PRKRIP1Q9H875 184 aaPredicted RBP12.99□□□□□ -0.33
PRPF3-207ENST00000496202 BRWD3Q6RI45 1802 aa12.98□□□□□ -0.33
PRPF3-207ENST00000496202 IL2RBP14784 551 aa12.98□□□□□ -0.33
PRPF3-207ENST00000496202 RAPGEF4Q8WZA2 1011 aa12.98□□□□□ -0.33
PRPF3-207ENST00000496202 PARP4Q9UKK3 1724 aaKnown RBP12.98□□□□□ -0.33
PRPF3-207ENST00000496202 ONECUT3O60422 494 aaPredicted RBP12.97□□□□□ -0.33
PRPF3-207ENST00000496202 EYA1Q99502 592 aa12.97□□□□□ -0.33
PRPF3-207ENST00000496202 NUDCQ9Y266 331 aa12.97□□□□□ -0.33
PRPF3-207ENST00000496202 LRRC37A3O60309 1634 aa12.97□□□□□ -0.33
PRPF3-207ENST00000496202 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
PRPF3-207ENST00000496202 DISP2A7MBM2 1401 aa12.96□□□□□ -0.33
PRPF3-207ENST00000496202 U2SURPO15042 1029 aaKnown RBP12.96□□□□□ -0.33
PRPF3-207ENST00000496202 TATP17735 454 aaPredicted RBP12.96□□□□□ -0.33
PRPF3-207ENST00000496202 IL13P35225 146 aa12.96□□□□□ -0.33
PRPF3-207ENST00000496202 PDE3BQ13370 1112 aa12.96□□□□□ -0.33
PRPF3-207ENST00000496202 DDB1Q16531 1140 aa12.96□□□□□ -0.33
PRPF3-207ENST00000496202 IGSF1Q8N6C5 1336 aa12.95□□□□□ -0.34
PRPF3-207ENST00000496202 ILDR2Q71H61 639 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms