RNA–Protein interactions for RNA: ENST00000495636.1

SLC6A1-205, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 1,088 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-205ENST00000495636 AXIN2Q9Y2T1 843 aa22.76■■□□□ 1.23
SLC6A1-205ENST00000495636 NFAT5O94916 1531 aa22.76■■□□□ 1.23
SLC6A1-205ENST00000495636 OVOS2A0A0G2JMS6 1433 aa22.75■■□□□ 1.23
SLC6A1-205ENST00000495636 OVOS2A0A0J9YW53 1432 aa22.75■■□□□ 1.23
SLC6A1-205ENST00000495636 OVOS2Q6IE36 1432 aa22.75■■□□□ 1.23
SLC6A1-205ENST00000495636 R3HDM1Q15032 1099 aaKnown RBP22.75■■□□□ 1.23
SLC6A1-205ENST00000495636 ABCC6O95255 1503 aa22.74■■□□□ 1.23
SLC6A1-205ENST00000495636 SOX12O15370 315 aa22.74■■□□□ 1.23
SLC6A1-205ENST00000495636 RREB1Q92766 1687 aa22.74■■□□□ 1.23
SLC6A1-205ENST00000495636 CD163L1Q9NR16 1453 aa22.73■■□□□ 1.23
SLC6A1-205ENST00000495636 WNK3Q9BYP7 1800 aa22.73■■□□□ 1.23
SLC6A1-205ENST00000495636 DDB1Q16531 1140 aa22.73■■□□□ 1.23
SLC6A1-205ENST00000495636 PEAK1Q9H792 1746 aa22.73■■□□□ 1.23
SLC6A1-205ENST00000495636 USP31Q70CQ4 1352 aa22.73■■□□□ 1.23
SLC6A1-205ENST00000495636 USP54Q70EL1 1684 aa22.72■■□□□ 1.23
SLC6A1-205ENST00000495636 CDCA7Q9BWT1 371 aaPredicted RBP22.72■■□□□ 1.23
SLC6A1-205ENST00000495636 TMC1Q8TDI8 760 aa22.71■■□□□ 1.23
SLC6A1-205ENST00000495636 RGPD5Q99666 1765 aa22.71■■□□□ 1.23
SLC6A1-205ENST00000495636 CSB-PGBD3P0DP91 1061 aa22.7■■□□□ 1.22
SLC6A1-205ENST00000495636 HDGFL2Q7Z4V5 671 aaPredicted RBP22.7■■□□□ 1.22
SLC6A1-205ENST00000495636 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.7■■□□□ 1.22
SLC6A1-205ENST00000495636 CARD10Q9BWT7 1032 aa22.7■■□□□ 1.22
SLC6A1-205ENST00000495636 NUP188Q5SRE5 1749 aa22.7■■□□□ 1.22
SLC6A1-205ENST00000495636 PUS7Q96PZ0 661 aaKnown RBP22.69■■□□□ 1.22
SLC6A1-205ENST00000495636 EDC4Q6P2E9 1401 aaKnown RBP22.68■■□□□ 1.22
SLC6A1-205ENST00000495636 SLC12A5Q9H2X9 1139 aa22.68■■□□□ 1.22
SLC6A1-205ENST00000495636 NME9Q86XW9 330 aa22.67■■□□□ 1.22
SLC6A1-205ENST00000495636 CCDC7Q96M83 1385 aa22.66■■□□□ 1.22
SLC6A1-205ENST00000495636 NBPF14Q5TI25 921 aa22.66■■□□□ 1.22
SLC6A1-205ENST00000495636 TERF2IPQ9NYB0 399 aa22.66■■□□□ 1.22
SLC6A1-205ENST00000495636 SBF2Q86WG5 1849 aa22.66■■□□□ 1.22
SLC6A1-205ENST00000495636 BCL9O00512 1426 aa22.65■■□□□ 1.22
SLC6A1-205ENST00000495636 RGPD3A6NKT7 1758 aaPredicted RBP22.65■■□□□ 1.22
SLC6A1-205ENST00000495636 RGPD4Q7Z3J3 1758 aa22.65■■□□□ 1.22
SLC6A1-205ENST00000495636 A0A1W2PP64 1363 aa22.64■■□□□ 1.22
SLC6A1-205ENST00000495636 TRIM26Q12899 539 aaPredicted RBP22.64■■□□□ 1.21
SLC6A1-205ENST00000495636 NINLQ9Y2I6 1382 aa22.63■■□□□ 1.21
SLC6A1-205ENST00000495636 MARCH10Q8NA82 808 aaPredicted RBP22.63■■□□□ 1.21
SLC6A1-205ENST00000495636 ERBB3P21860 1342 aa22.62■■□□□ 1.21
SLC6A1-205ENST00000495636 PLSCR1O15162 318 aa22.62■■□□□ 1.21
SLC6A1-205ENST00000495636 SLC24A1O60721 1099 aa22.62■■□□□ 1.21
SLC6A1-205ENST00000495636 TESK2Q96S53 571 aa22.62■■□□□ 1.21
SLC6A1-205ENST00000495636 BCL11BQ9C0K0 894 aaPredicted RBP22.62■■□□□ 1.21
SLC6A1-205ENST00000495636 LTN1O94822 1766 aa22.61■■□□□ 1.21
SLC6A1-205ENST00000495636 ST20-MTHFSA0A0A6YYL1 179 aa22.61■■□□□ 1.21
SLC6A1-205ENST00000495636 TNS2Q63HR2 1409 aa22.61■■□□□ 1.21
SLC6A1-205ENST00000495636 EXOC5O00471 708 aa22.6■■□□□ 1.21
SLC6A1-205ENST00000495636 NLRP2Q9NX02 1062 aa22.57■■□□□ 1.2
SLC6A1-205ENST00000495636 PTF1AQ7RTS3 328 aa22.56■■□□□ 1.2
SLC6A1-205ENST00000495636 ANKRD24Q8TF21 1146 aa22.55■■□□□ 1.2
SLC6A1-205ENST00000495636 IL2RBP14784 551 aa22.53■■□□□ 1.2
SLC6A1-205ENST00000495636 ANKRD36BQ8N2N9 1353 aa22.51■■□□□ 1.19
SLC6A1-205ENST00000495636 USP47Q96K76 1375 aa22.51■■□□□ 1.19
SLC6A1-205ENST00000495636 IP6K1Q92551 441 aa22.51■■□□□ 1.19
SLC6A1-205ENST00000495636 COG3Q96JB2 828 aa22.51■■□□□ 1.19
SLC6A1-205ENST00000495636 NHSQ6T4R5 1651 aa22.5■■□□□ 1.19
SLC6A1-205ENST00000495636 FAM208AQ9UK61 1670 aaKnown RBP22.5■■□□□ 1.19
SLC6A1-205ENST00000495636 SPON1Q9HCB6 807 aa22.5■■□□□ 1.19
SLC6A1-205ENST00000495636 ANO8Q9HCE9 1232 aaPredicted RBP22.5■■□□□ 1.19
SLC6A1-205ENST00000495636 TMF1P82094 1093 aa22.49■■□□□ 1.19
SLC6A1-205ENST00000495636 PROM2Q8N271 834 aa22.49■■□□□ 1.19
SLC6A1-205ENST00000495636 KCNQ2O43526 872 aa22.47■■□□□ 1.19
SLC6A1-205ENST00000495636 TXNRD1Q16881 649 aa22.47■■□□□ 1.19
SLC6A1-205ENST00000495636 MAP3K19Q56UN5 1328 aa22.46■■□□□ 1.19
SLC6A1-205ENST00000495636 CASZ1Q86V15 1759 aa22.45■■□□□ 1.18
SLC6A1-205ENST00000495636 HOXC9P31274 260 aa22.44■■□□□ 1.18
SLC6A1-205ENST00000495636 LTV1Q96GA3 475 aaPredicted RBP22.44■■□□□ 1.18
SLC6A1-205ENST00000495636 ACSBG1Q96GR2 724 aa22.44■■□□□ 1.18
SLC6A1-205ENST00000495636 PPP1R1BQ9UD71 204 aaPredicted RBP22.44■■□□□ 1.18
SLC6A1-205ENST00000495636 AMPHP49418 695 aa22.43■■□□□ 1.18
SLC6A1-205ENST00000495636 CDCA8Q53HL2 280 aa22.43■■□□□ 1.18
SLC6A1-205ENST00000495636 RTL1A6NKG5 1358 aa22.42■■□□□ 1.18
SLC6A1-205ENST00000495636 STK32BQ9NY57 414 aa22.42■■□□□ 1.18
SLC6A1-205ENST00000495636 FYB1O15117 783 aa22.4■■□□□ 1.18
SLC6A1-205ENST00000495636 TIMELESSQ9UNS1 1208 aa22.4■■□□□ 1.18
SLC6A1-205ENST00000495636 BTAF1O14981 1849 aa22.4■■□□□ 1.18
SLC6A1-205ENST00000495636 FBLN1P23142 703 aa22.39■■□□□ 1.17
SLC6A1-205ENST00000495636 SLC15A2Q16348 729 aa22.39■■□□□ 1.17
SLC6A1-205ENST00000495636 GGNBP2Q9H3C7 697 aa22.39■■□□□ 1.17
SLC6A1-205ENST00000495636 KAT6BQ8WYB5 2073 aa22.38■■□□□ 1.17
SLC6A1-205ENST00000495636 CLSPNQ9HAW4 1339 aa22.37■■□□□ 1.17
SLC6A1-205ENST00000495636 PDGFDQ9GZP0 370 aaPredicted RBP22.37■■□□□ 1.17
SLC6A1-205ENST00000495636 PAPPAQ13219 1627 aa22.36■■□□□ 1.17
SLC6A1-205ENST00000495636 RRS1Q15050 365 aaKnown RBP22.36■■□□□ 1.17
SLC6A1-205ENST00000495636 DDX54Q8TDD1 881 aaKnown RBP22.36■■□□□ 1.17
SLC6A1-205ENST00000495636 KIF20BQ96Q89 1820 aa22.36■■□□□ 1.17
SLC6A1-205ENST00000495636 ZBTB7AO95365 584 aa22.35■■□□□ 1.17
SLC6A1-205ENST00000495636 RGPD2P0DJD1 1756 aa22.35■■□□□ 1.17
SLC6A1-205ENST00000495636 SMG6Q86US8 1419 aaKnown RBP22.34■■□□□ 1.17
SLC6A1-205ENST00000495636 MYOM1P52179 1685 aa22.33■■□□□ 1.17
SLC6A1-205ENST00000495636 MEGF6O75095 1541 aa22.33■■□□□ 1.17
SLC6A1-205ENST00000495636 KIF24Q5T7B8 1368 aa22.32■■□□□ 1.16
SLC6A1-205ENST00000495636 SHANK3Q9BYB0 1731 aa22.31■■□□□ 1.16
SLC6A1-205ENST00000495636 PTGER2P43116 358 aa22.31■■□□□ 1.16
SLC6A1-205ENST00000495636 ZCRB1Q8TBF4 217 aaKnown RBP22.31■■□□□ 1.16
SLC6A1-205ENST00000495636 NSD3Q9BZ95 1437 aa22.31■■□□□ 1.16
SLC6A1-205ENST00000495636 INSRP06213 1382 aa22.3■■□□□ 1.16
SLC6A1-205ENST00000495636 FLT4P35916 1363 aa22.3■■□□□ 1.16
SLC6A1-205ENST00000495636 NBPF6Q5VWK0 638 aa22.3■■□□□ 1.16
SLC6A1-205ENST00000495636 NBPF4Q96M43 638 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms