RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 MTFR1LQ9H019 292 aa16.75■□□□□ 0.27
HLA-DOA-206ENST00000495532 MAP3K5Q99683 1374 aa16.75■□□□□ 0.27
HLA-DOA-206ENST00000495532 TXNRD1Q16881 649 aa16.74■□□□□ 0.27
HLA-DOA-206ENST00000495532 STK32BQ9NY57 414 aa16.74■□□□□ 0.27
HLA-DOA-206ENST00000495532 PAPPAQ13219 1627 aa16.74■□□□□ 0.27
HLA-DOA-206ENST00000495532 PLEKHG3A1L390 1219 aa16.73■□□□□ 0.27
HLA-DOA-206ENST00000495532 MARCH10Q8NA82 808 aaPredicted RBP16.73■□□□□ 0.27
HLA-DOA-206ENST00000495532 CDK19Q9BWU1 502 aa16.73■□□□□ 0.27
HLA-DOA-206ENST00000495532 AATKQ6ZMQ8 1374 aa16.73■□□□□ 0.27
HLA-DOA-206ENST00000495532 SHANK3Q9BYB0 1731 aa16.73■□□□□ 0.27
HLA-DOA-206ENST00000495532 SLIT3O75094 1523 aa16.72■□□□□ 0.27
HLA-DOA-206ENST00000495532 CCDC61Q9Y6R9 512 aa16.72■□□□□ 0.27
HLA-DOA-206ENST00000495532 GIGYF1O75420 1035 aaPredicted RBP16.71■□□□□ 0.27
HLA-DOA-206ENST00000495532 NLRP13Q86W25 1043 aa16.71■□□□□ 0.27
HLA-DOA-206ENST00000495532 GOLGB1Q14789 3259 aaKnown RBP16.7■□□□□ 0.26
HLA-DOA-206ENST00000495532 NHSQ6T4R5 1651 aa16.7■□□□□ 0.26
HLA-DOA-206ENST00000495532 ARXQ96QS3 562 aa16.7■□□□□ 0.26
HLA-DOA-206ENST00000495532 RGPD5Q99666 1765 aa16.69■□□□□ 0.26
HLA-DOA-206ENST00000495532 TOM1L2Q6ZVM7 507 aa16.69■□□□□ 0.26
HLA-DOA-206ENST00000495532 KDM2AQ9Y2K7 1162 aa16.68■□□□□ 0.26
HLA-DOA-206ENST00000495532 COL24A1Q17RW2 1714 aa16.67■□□□□ 0.26
HLA-DOA-206ENST00000495532 DCAF11Q8TEB1 546 aa16.67■□□□□ 0.26
HLA-DOA-206ENST00000495532 WDR17Q8IZU2 1322 aa16.67■□□□□ 0.26
HLA-DOA-206ENST00000495532 PIK3C2AO00443 1686 aa16.66■□□□□ 0.26
HLA-DOA-206ENST00000495532 ZBTB7CA1YPR0 619 aa16.66■□□□□ 0.26
HLA-DOA-206ENST00000495532 CDCA7Q9BWT1 371 aaPredicted RBP16.66■□□□□ 0.26
HLA-DOA-206ENST00000495532 PPIP5K1Q6PFW1 1433 aa16.65■□□□□ 0.26
HLA-DOA-206ENST00000495532 GPR162Q16538 588 aa16.65■□□□□ 0.26
HLA-DOA-206ENST00000495532 AXIN2Q9Y2T1 843 aa16.65■□□□□ 0.26
HLA-DOA-206ENST00000495532 QSER1Q2KHR3 1735 aa16.65■□□□□ 0.26
HLA-DOA-206ENST00000495532 BRD4O60885 1362 aaPredicted RBP16.64■□□□□ 0.26
HLA-DOA-206ENST00000495532 TRPM1Q7Z4N2 1603 aa16.64■□□□□ 0.25
HLA-DOA-206ENST00000495532 BTAF1O14981 1849 aa16.64■□□□□ 0.25
HLA-DOA-206ENST00000495532 CPSF1Q10570 1443 aaKnown RBP16.63■□□□□ 0.25
HLA-DOA-206ENST00000495532 USP6P35125 1406 aa16.62■□□□□ 0.25
HLA-DOA-206ENST00000495532 TNS2Q63HR2 1409 aa16.62■□□□□ 0.25
HLA-DOA-206ENST00000495532 STAC3Q96MF2 364 aa16.62■□□□□ 0.25
HLA-DOA-206ENST00000495532 NLRP6P59044 892 aa16.61■□□□□ 0.25
HLA-DOA-206ENST00000495532 ZNF827Q17R98 1081 aa16.61■□□□□ 0.25
HLA-DOA-206ENST00000495532 QRICH2Q9H0J4 1663 aa16.61■□□□□ 0.25
HLA-DOA-206ENST00000495532 KIAA1210Q9ULL0 1709 aa16.61■□□□□ 0.25
HLA-DOA-206ENST00000495532 ABCC6O95255 1503 aa16.6■□□□□ 0.25
HLA-DOA-206ENST00000495532 CARD10Q9BWT7 1032 aa16.6■□□□□ 0.25
HLA-DOA-206ENST00000495532 TUBGCP6Q96RT7 1819 aa16.6■□□□□ 0.25
HLA-DOA-206ENST00000495532 EXOC5O00471 708 aa16.58■□□□□ 0.24
HLA-DOA-206ENST00000495532 ARHGEF25Q86VW2 580 aa16.57■□□□□ 0.24
HLA-DOA-206ENST00000495532 CCDC7Q96M83 1385 aa16.56■□□□□ 0.24
HLA-DOA-206ENST00000495532 SRPK2P78362 688 aaKnown RBP16.56■□□□□ 0.24
HLA-DOA-206ENST00000495532 PELP1Q8IZL8 1130 aaKnown RBP16.56■□□□□ 0.24
HLA-DOA-206ENST00000495532 KLHL34Q8N239 644 aa16.56■□□□□ 0.24
HLA-DOA-206ENST00000495532 ACSBG1Q96GR2 724 aa16.56■□□□□ 0.24
HLA-DOA-206ENST00000495532 CABP2Q9NPB3 220 aa16.56■□□□□ 0.24
HLA-DOA-206ENST00000495532 LRRC4BQ9NT99 713 aa16.56■□□□□ 0.24
HLA-DOA-206ENST00000495532 KAT6BQ8WYB5 2073 aa16.56■□□□□ 0.24
HLA-DOA-206ENST00000495532 NFAT5O94916 1531 aa16.55■□□□□ 0.24
HLA-DOA-206ENST00000495532 NLGN2Q8NFZ4 835 aa16.55■□□□□ 0.24
HLA-DOA-206ENST00000495532 CSB-PGBD3P0DP91 1061 aa16.54■□□□□ 0.24
HLA-DOA-206ENST00000495532 SLC16A10Q8TF71 515 aa16.54■□□□□ 0.24
HLA-DOA-206ENST00000495532 AKT1S1Q96B36 256 aa16.54■□□□□ 0.24
HLA-DOA-206ENST00000495532 ATP10DQ9P241 1426 aa16.53■□□□□ 0.24
HLA-DOA-206ENST00000495532 YBX3P16989 372 aaKnown RBP eCLIP16.53■□□□□ 0.24
HLA-DOA-206ENST00000495532 POLD1P28340 1107 aa16.53■□□□□ 0.24
HLA-DOA-206ENST00000495532 CABP1Q9NZU7 370 aa16.53■□□□□ 0.24
HLA-DOA-206ENST00000495532 RAB3GAP2Q9H2M9 1393 aa16.52■□□□□ 0.24
HLA-DOA-206ENST00000495532 PNPLA7Q6ZV29 1317 aa16.52■□□□□ 0.24
HLA-DOA-206ENST00000495532 CENPJQ9HC77 1338 aaPredicted RBP16.5■□□□□ 0.23
HLA-DOA-206ENST00000495532 KCNH5Q8NCM2 988 aa16.5■□□□□ 0.23
HLA-DOA-206ENST00000495532 SOX12O15370 315 aa16.49■□□□□ 0.23
HLA-DOA-206ENST00000495532 GRIN3BO60391 1043 aa16.49■□□□□ 0.23
HLA-DOA-206ENST00000495532 HSPA6P17066 643 aa16.49■□□□□ 0.23
HLA-DOA-206ENST00000495532 NBPF1Q3BBV0 1214 aa16.49■□□□□ 0.23
HLA-DOA-206ENST00000495532 LY75O60449 1722 aa16.48■□□□□ 0.23
HLA-DOA-206ENST00000495532 ADCY9O60503 1353 aa16.48■□□□□ 0.23
HLA-DOA-206ENST00000495532 TTC21BQ7Z4L5 1316 aa16.47■□□□□ 0.23
HLA-DOA-206ENST00000495532 LTN1O94822 1766 aa16.47■□□□□ 0.23
HLA-DOA-206ENST00000495532 SLC27A3Q5K4L6 730 aa16.46■□□□□ 0.23
HLA-DOA-206ENST00000495532 USP54Q70EL1 1684 aa16.46■□□□□ 0.23
HLA-DOA-206ENST00000495532 ERBB3P21860 1342 aa16.45■□□□□ 0.22
HLA-DOA-206ENST00000495532 IL2RBP14784 551 aa16.45■□□□□ 0.22
HLA-DOA-206ENST00000495532 GPBP1L1Q9HC44 474 aaPredicted RBP16.45■□□□□ 0.22
HLA-DOA-206ENST00000495532 TFCP2L1Q9NZI6 479 aa16.44■□□□□ 0.22
HLA-DOA-206ENST00000495532 TTC21AQ8NDW8 1320 aa16.44■□□□□ 0.22
HLA-DOA-206ENST00000495532 MON2Q7Z3U7 1717 aa16.43■□□□□ 0.22
HLA-DOA-206ENST00000495532 DOT1LQ8TEK3 1739 aa16.43■□□□□ 0.22
HLA-DOA-206ENST00000495532 KCNQ4P56696 695 aa16.42■□□□□ 0.22
HLA-DOA-206ENST00000495532 NLRP2Q9NX02 1062 aa16.42■□□□□ 0.22
HLA-DOA-206ENST00000495532 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
HLA-DOA-206ENST00000495532 ZNF526Q8TF50 670 aaPredicted RBP16.39■□□□□ 0.21
HLA-DOA-206ENST00000495532 NSD2O96028 1365 aa16.38■□□□□ 0.21
HLA-DOA-206ENST00000495532 FAM208AQ9UK61 1670 aaKnown RBP16.38■□□□□ 0.21
HLA-DOA-206ENST00000495532 EVC2Q86UK5 1308 aa16.38■□□□□ 0.21
HLA-DOA-206ENST00000495532 COL23A1Q86Y22 540 aaPredicted RBP16.37■□□□□ 0.21
HLA-DOA-206ENST00000495532 USP31Q70CQ4 1352 aa16.37■□□□□ 0.21
HLA-DOA-206ENST00000495532 KTN1Q86UP2 1357 aaKnown RBP16.37■□□□□ 0.21
HLA-DOA-206ENST00000495532 ANKRD36BQ8N2N9 1353 aa16.37■□□□□ 0.21
HLA-DOA-206ENST00000495532 C5P01031 1676 aa16.37■□□□□ 0.21
HLA-DOA-206ENST00000495532 ANKRD24Q8TF21 1146 aa16.36■□□□□ 0.21
HLA-DOA-206ENST00000495532 MSL1Q68DK7 614 aa16.35■□□□□ 0.21
HLA-DOA-206ENST00000495532 DDX54Q8TDD1 881 aaKnown RBP16.35■□□□□ 0.21
HLA-DOA-206ENST00000495532 CD2APQ9Y5K6 639 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms