RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 A0A1W2PP64 1363 aa21.86■■□□□ 1.09
LIMS2-216ENST00000494613 CRB1P82279 1406 aa21.84■■□□□ 1.09
LIMS2-216ENST00000494613 EDC4Q6P2E9 1401 aaKnown RBP21.84■■□□□ 1.09
LIMS2-216ENST00000494613 WDR17Q8IZU2 1322 aa21.83■■□□□ 1.09
LIMS2-216ENST00000494613 CSB-PGBD3P0DP91 1061 aa21.83■■□□□ 1.09
LIMS2-216ENST00000494613 BAG6P46379 1132 aa21.83■■□□□ 1.09
LIMS2-216ENST00000494613 THSD7AQ9UPZ6 1657 aa21.82■■□□□ 1.08
LIMS2-216ENST00000494613 TRIM37O94972 964 aa21.82■■□□□ 1.08
LIMS2-216ENST00000494613 CDCA8Q53HL2 280 aa21.82■■□□□ 1.08
LIMS2-216ENST00000494613 NINLQ9Y2I6 1382 aa21.82■■□□□ 1.08
LIMS2-216ENST00000494613 COL18A1P39060 1754 aa21.82■■□□□ 1.08
LIMS2-216ENST00000494613 EN1Q05925 392 aaPredicted RBP21.81■■□□□ 1.08
LIMS2-216ENST00000494613 CARD10Q9BWT7 1032 aa21.81■■□□□ 1.08
LIMS2-216ENST00000494613 MON2Q7Z3U7 1717 aa21.8■■□□□ 1.08
LIMS2-216ENST00000494613 COG3Q96JB2 828 aa21.78■■□□□ 1.08
LIMS2-216ENST00000494613 NFAT5O94916 1531 aa21.78■■□□□ 1.08
LIMS2-216ENST00000494613 FYB1O15117 783 aa21.77■■□□□ 1.08
LIMS2-216ENST00000494613 FBLN1P23142 703 aa21.77■■□□□ 1.08
LIMS2-216ENST00000494613 DDB1Q16531 1140 aa21.77■■□□□ 1.08
LIMS2-216ENST00000494613 ANKRD36BQ8N2N9 1353 aa21.76■■□□□ 1.07
LIMS2-216ENST00000494613 APBA3O96018 575 aa21.76■■□□□ 1.07
LIMS2-216ENST00000494613 CDCA7Q9BWT1 371 aaPredicted RBP21.76■■□□□ 1.07
LIMS2-216ENST00000494613 EXOC5O00471 708 aa21.74■■□□□ 1.07
LIMS2-216ENST00000494613 EZH2Q15910 746 aaKnown RBP21.74■■□□□ 1.07
LIMS2-216ENST00000494613 IP6K1Q92551 441 aa21.74■■□□□ 1.07
LIMS2-216ENST00000494613 CAMKK2Q96RR4 588 aa21.74■■□□□ 1.07
LIMS2-216ENST00000494613 NLRP2Q9NX02 1062 aa21.74■■□□□ 1.07
LIMS2-216ENST00000494613 C11orf95C9JLR9 678 aaPredicted RBP21.73■■□□□ 1.07
LIMS2-216ENST00000494613 ANKRD24Q8TF21 1146 aa21.73■■□□□ 1.07
LIMS2-216ENST00000494613 CARD14Q9BXL6 1004 aa21.73■■□□□ 1.07
LIMS2-216ENST00000494613 GGNBP2Q9H3C7 697 aa21.73■■□□□ 1.07
LIMS2-216ENST00000494613 RGPD5Q99666 1765 aa21.73■■□□□ 1.07
LIMS2-216ENST00000494613 MARCH10Q8NA82 808 aaPredicted RBP21.72■■□□□ 1.07
LIMS2-216ENST00000494613 OVOS2A0A0J9YW53 1432 aa21.72■■□□□ 1.07
LIMS2-216ENST00000494613 OVOS2Q6IE36 1432 aa21.72■■□□□ 1.07
LIMS2-216ENST00000494613 EIF4G2P78344 907 aaKnown RBP eCLIP21.71■■□□□ 1.07
LIMS2-216ENST00000494613 ERBB3P21860 1342 aa21.71■■□□□ 1.07
LIMS2-216ENST00000494613 HSPA5P11021 654 aaKnown RBP21.69■■□□□ 1.06
LIMS2-216ENST00000494613 AMPHP49418 695 aa21.69■■□□□ 1.06
LIMS2-216ENST00000494613 CCDC7Q96M83 1385 aa21.69■■□□□ 1.06
LIMS2-216ENST00000494613 LTV1Q96GA3 475 aaPredicted RBP21.68■■□□□ 1.06
LIMS2-216ENST00000494613 MAP3K19Q56UN5 1328 aa21.68■■□□□ 1.06
LIMS2-216ENST00000494613 USP54Q70EL1 1684 aa21.68■■□□□ 1.06
LIMS2-216ENST00000494613 POLR3GLQ9BT43 218 aa21.67■■□□□ 1.06
LIMS2-216ENST00000494613 DISP2A7MBM2 1401 aa21.66■■□□□ 1.06
LIMS2-216ENST00000494613 HOXC9P31274 260 aa21.66■■□□□ 1.06
LIMS2-216ENST00000494613 PSDA5PKW4 1024 aaPredicted RBP21.65■■□□□ 1.06
LIMS2-216ENST00000494613 IL2RBP14784 551 aa21.65■■□□□ 1.06
LIMS2-216ENST00000494613 RRS1Q15050 365 aaKnown RBP21.65■■□□□ 1.06
LIMS2-216ENST00000494613 PTF1AQ7RTS3 328 aa21.65■■□□□ 1.06
LIMS2-216ENST00000494613 PARP4Q9UKK3 1724 aaKnown RBP21.65■■□□□ 1.06
LIMS2-216ENST00000494613 ABCC6O95255 1503 aa21.65■■□□□ 1.06
LIMS2-216ENST00000494613 RGPD1P0DJD0 1748 aa21.64■■□□□ 1.06
LIMS2-216ENST00000494613 BCL11BQ9C0K0 894 aaPredicted RBP21.64■■□□□ 1.05
LIMS2-216ENST00000494613 OVOS2A0A0G2JMS6 1433 aa21.63■■□□□ 1.05
LIMS2-216ENST00000494613 PLSCR1O15162 318 aa21.61■■□□□ 1.05
LIMS2-216ENST00000494613 R3HDM1Q15032 1099 aaKnown RBP21.61■■□□□ 1.05
LIMS2-216ENST00000494613 LTN1O94822 1766 aa21.61■■□□□ 1.05
LIMS2-216ENST00000494613 PARD3Q8TEW0 1356 aa21.59■■□□□ 1.05
LIMS2-216ENST00000494613 SRCAPQ6ZRS2 3230 aa21.59■■□□□ 1.05
LIMS2-216ENST00000494613 TNS1Q9HBL0 1735 aaKnown RBP21.58■■□□□ 1.05
LIMS2-216ENST00000494613 BCL9O00512 1426 aa21.57■■□□□ 1.04
LIMS2-216ENST00000494613 NSD3Q9BZ95 1437 aa21.57■■□□□ 1.04
LIMS2-216ENST00000494613 KCNQ2O43526 872 aa21.57■■□□□ 1.04
LIMS2-216ENST00000494613 HSP90AB2PQ58FF8 381 aa21.57■■□□□ 1.04
LIMS2-216ENST00000494613 NBPF14Q5TI25 921 aa21.57■■□□□ 1.04
LIMS2-216ENST00000494613 NBPF6Q5VWK0 638 aa21.57■■□□□ 1.04
LIMS2-216ENST00000494613 NBPF4Q96M43 638 aa21.57■■□□□ 1.04
LIMS2-216ENST00000494613 LRRC37A3O60309 1634 aa21.57■■□□□ 1.04
LIMS2-216ENST00000494613 PEAK1Q9H792 1746 aa21.56■■□□□ 1.04
LIMS2-216ENST00000494613 PROM2Q8N271 834 aa21.56■■□□□ 1.04
LIMS2-216ENST00000494613 DDX54Q8TDD1 881 aaKnown RBP21.56■■□□□ 1.04
LIMS2-216ENST00000494613 PANK3Q9H999 370 aa21.56■■□□□ 1.04
LIMS2-216ENST00000494613 ACSBG1Q96GR2 724 aa21.55■■□□□ 1.04
LIMS2-216ENST00000494613 CGNL1Q0VF96 1302 aa21.55■■□□□ 1.04
LIMS2-216ENST00000494613 EMILIN1Q9Y6C2 1016 aa21.53■■□□□ 1.04
LIMS2-216ENST00000494613 TNS2Q63HR2 1409 aa21.52■■□□□ 1.04
LIMS2-216ENST00000494613 RTL1A6NKG5 1358 aa21.51■■□□□ 1.03
LIMS2-216ENST00000494613 PPM1GO15355 546 aaPredicted RBP21.51■■□□□ 1.03
LIMS2-216ENST00000494613 USHBP1Q8N6Y0 703 aa21.51■■□□□ 1.03
LIMS2-216ENST00000494613 ZCRB1Q8TBF4 217 aaKnown RBP21.51■■□□□ 1.03
LIMS2-216ENST00000494613 SBF2Q86WG5 1849 aa21.5■■□□□ 1.03
LIMS2-216ENST00000494613 INSRP06213 1382 aa21.5■■□□□ 1.03
LIMS2-216ENST00000494613 WNK3Q9BYP7 1800 aa21.5■■□□□ 1.03
LIMS2-216ENST00000494613 MYOM1P52179 1685 aa21.5■■□□□ 1.03
LIMS2-216ENST00000494613 POLKQ9UBT6 870 aa21.49■■□□□ 1.03
LIMS2-216ENST00000494613 TXNRD1Q16881 649 aa21.48■■□□□ 1.03
LIMS2-216ENST00000494613 FLT4P35916 1363 aa21.48■■□□□ 1.03
LIMS2-216ENST00000494613 KIF24Q5T7B8 1368 aa21.48■■□□□ 1.03
LIMS2-216ENST00000494613 TNNT2P45379 298 aaPredicted RBP21.47■■□□□ 1.03
LIMS2-216ENST00000494613 RAPGEF4Q8WZA2 1011 aa21.46■■□□□ 1.03
LIMS2-216ENST00000494613 WASHC2AQ641Q2 1341 aa21.46■■□□□ 1.03
LIMS2-216ENST00000494613 TATP17735 454 aaPredicted RBP21.44■■□□□ 1.02
LIMS2-216ENST00000494613 PRIM1P49642 420 aaKnown RBP21.44■■□□□ 1.02
LIMS2-216ENST00000494613 KIF20BQ96Q89 1820 aa21.43■■□□□ 1.02
LIMS2-216ENST00000494613 SMG6Q86US8 1419 aaKnown RBP21.43■■□□□ 1.02
LIMS2-216ENST00000494613 RGPD2P0DJD1 1756 aa21.42■■□□□ 1.02
LIMS2-216ENST00000494613 ANO8Q9HCE9 1232 aaPredicted RBP21.42■■□□□ 1.02
LIMS2-216ENST00000494613 KNSTRNQ9Y448 316 aa21.42■■□□□ 1.02
LIMS2-216ENST00000494613 KAT6BQ8WYB5 2073 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms