RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 MAPK8IP2Q13387 824 aaPredicted RBP12.38□□□□□ -0.43
LINC00488-201ENST00000494582 ZNF771Q7L3S4 317 aaPredicted RBP12.38□□□□□ -0.43
LINC00488-201ENST00000494582 CWC22Q9HCG8 908 aaKnown RBP12.38□□□□□ -0.43
LINC00488-201ENST00000494582 DUOX2Q9NRD8 1548 aa12.38□□□□□ -0.43
LINC00488-201ENST00000494582 ABCA8O94911 1581 aa12.38□□□□□ -0.43
LINC00488-201ENST00000494582 PYCARDQ9ULZ3 195 aa12.38□□□□□ -0.43
LINC00488-201ENST00000494582 ATP10BO94823 1461 aa12.37□□□□□ -0.43
LINC00488-201ENST00000494582 ZBTB7BO15156 539 aaPredicted RBP12.37□□□□□ -0.43
LINC00488-201ENST00000494582 SMARCA5O60264 1052 aaPredicted RBP12.37□□□□□ -0.43
LINC00488-201ENST00000494582 ADCY5O95622 1261 aa12.37□□□□□ -0.43
LINC00488-201ENST00000494582 IRX5P78411 483 aaPredicted RBP12.37□□□□□ -0.43
LINC00488-201ENST00000494582 KCNF1Q9H3M0 494 aa12.37□□□□□ -0.43
LINC00488-201ENST00000494582 GDPD2Q9HCC8 539 aa12.37□□□□□ -0.43
LINC00488-201ENST00000494582 FOXD4L6Q3SYB3 417 aaPredicted RBP12.37□□□□□ -0.43
LINC00488-201ENST00000494582 CFAP70Q5T0N1 1121 aa12.37□□□□□ -0.43
LINC00488-201ENST00000494582 FOXD4L3Q6VB84 417 aaPredicted RBP12.37□□□□□ -0.43
LINC00488-201ENST00000494582 CLTCL1P53675 1640 aa12.37□□□□□ -0.43
LINC00488-201ENST00000494582 CTIFO43310 598 aaKnown RBP12.36□□□□□ -0.43
LINC00488-201ENST00000494582 MBD3O95983 291 aa12.36□□□□□ -0.43
LINC00488-201ENST00000494582 PPRC1Q5VV67 1664 aaKnown RBP12.36□□□□□ -0.43
LINC00488-201ENST00000494582 PLEKHM2Q8IWE5 1019 aa12.36□□□□□ -0.43
LINC00488-201ENST00000494582 C16orf71Q8IYS4 520 aaPredicted RBP12.36□□□□□ -0.43
LINC00488-201ENST00000494582 SLC12A5Q9H2X9 1139 aa12.36□□□□□ -0.43
LINC00488-201ENST00000494582 CDC42BPBQ9Y5S2 1711 aa12.36□□□□□ -0.43
LINC00488-201ENST00000494582 SYCP2Q9BX26 1530 aa12.36□□□□□ -0.43
LINC00488-201ENST00000494582 AP5Z1O43299 807 aa12.36□□□□□ -0.43
LINC00488-201ENST00000494582 SLFN14P0C7P3 912 aa12.36□□□□□ -0.43
LINC00488-201ENST00000494582 GCC1Q96CN9 775 aa12.36□□□□□ -0.43
LINC00488-201ENST00000494582 MED14O60244 1454 aa12.35□□□□□ -0.43
LINC00488-201ENST00000494582 NCBP1Q09161 790 aaKnown RBP12.35□□□□□ -0.43
LINC00488-201ENST00000494582 OTUD7AQ8TE49 926 aaPredicted RBP12.35□□□□□ -0.43
LINC00488-201ENST00000494582 IFT140Q96RY7 1462 aa12.35□□□□□ -0.43
LINC00488-201ENST00000494582 PTPRTO14522 1441 aa12.35□□□□□ -0.43
LINC00488-201ENST00000494582 NAA30Q147X3 362 aaPredicted RBP12.35□□□□□ -0.43
LINC00488-201ENST00000494582 MAST1Q9Y2H9 1570 aa12.34□□□□□ -0.43
LINC00488-201ENST00000494582 TMPOP42166 694 aaKnown RBP12.34□□□□□ -0.43
LINC00488-201ENST00000494582 TAF3Q5VWG9 929 aa12.34□□□□□ -0.43
LINC00488-201ENST00000494582 KIAA1524Q8TCG1 905 aa12.34□□□□□ -0.43
LINC00488-201ENST00000494582 PLEKHF1Q96S99 279 aa12.34□□□□□ -0.43
LINC00488-201ENST00000494582 BRD1O95696 1058 aa12.34□□□□□ -0.43
LINC00488-201ENST00000494582 KCNJ4P48050 445 aa12.34□□□□□ -0.43
LINC00488-201ENST00000494582 OGFRQ9NZT2 677 aa12.34□□□□□ -0.43
LINC00488-201ENST00000494582 CTNNA3Q9UI47 895 aa12.34□□□□□ -0.43
LINC00488-201ENST00000494582 ABCC11Q96J66 1382 aa12.33□□□□□ -0.44
LINC00488-201ENST00000494582 HCLS1P14317 486 aaPredicted RBP12.33□□□□□ -0.44
LINC00488-201ENST00000494582 ATAD2Q6PL18 1390 aa12.33□□□□□ -0.44
LINC00488-201ENST00000494582 TTC22Q5TAA0 569 aa12.33□□□□□ -0.44
LINC00488-201ENST00000494582 FEZ1Q99689 392 aa12.32□□□□□ -0.44
LINC00488-201ENST00000494582 IPO8O15397 1037 aaKnown RBP12.32□□□□□ -0.44
LINC00488-201ENST00000494582 ST18O60284 1047 aa12.32□□□□□ -0.44
LINC00488-201ENST00000494582 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
LINC00488-201ENST00000494582 NCBP3Q53F19 620 aaKnown RBP12.32□□□□□ -0.44
LINC00488-201ENST00000494582 TMX3Q96JJ7 454 aa12.32□□□□□ -0.44
LINC00488-201ENST00000494582 ADGRL1O94910 1474 aa12.31□□□□□ -0.44
LINC00488-201ENST00000494582 ERCC6Q03468 1493 aa12.31□□□□□ -0.44
LINC00488-201ENST00000494582 UVSSAQ2YD98 709 aa12.31□□□□□ -0.44
LINC00488-201ENST00000494582 USP48Q86UV5 1035 aa12.31□□□□□ -0.44
LINC00488-201ENST00000494582 CFAP53Q96M91 514 aa12.31□□□□□ -0.44
LINC00488-201ENST00000494582 ADGRF5Q8IZF2 1346 aa12.3□□□□□ -0.44
LINC00488-201ENST00000494582 PREX2Q70Z35 1606 aa12.3□□□□□ -0.44
LINC00488-201ENST00000494582 SDSP20132 328 aa12.3□□□□□ -0.44
LINC00488-201ENST00000494582 GABPB1Q06547 395 aaPredicted RBP12.3□□□□□ -0.44
LINC00488-201ENST00000494582 DDX41Q9UJV9 622 aaKnown RBP12.3□□□□□ -0.44
LINC00488-201ENST00000494582 KNDC1Q76NI1 1749 aa12.29□□□□□ -0.44
LINC00488-201ENST00000494582 ANKRD36BQ8N2N9 1353 aa12.29□□□□□ -0.44
LINC00488-201ENST00000494582 KDM4AO75164 1064 aa12.29□□□□□ -0.44
LINC00488-201ENST00000494582 CAPN2P17655 700 aa12.29□□□□□ -0.44
LINC00488-201ENST00000494582 NOL8Q76FK4 1167 aaKnown RBP12.29□□□□□ -0.44
LINC00488-201ENST00000494582 DIAPH3Q9NSV4 1193 aa12.29□□□□□ -0.44
LINC00488-201ENST00000494582 ABCA6Q8N139 1617 aa12.29□□□□□ -0.44
LINC00488-201ENST00000494582 U2SURPO15042 1029 aaKnown RBP12.29□□□□□ -0.44
LINC00488-201ENST00000494582 SPC24Q8NBT2 197 aa12.29□□□□□ -0.44
LINC00488-201ENST00000494582 TCHHQ07283 1943 aa12.28□□□□□ -0.44
LINC00488-201ENST00000494582 REREQ9P2R6 1566 aa12.28□□□□□ -0.44
LINC00488-201ENST00000494582 TRPM2O94759 1503 aa12.28□□□□□ -0.44
LINC00488-201ENST00000494582 PLCB2Q00722 1185 aa12.28□□□□□ -0.44
LINC00488-201ENST00000494582 TERF2Q15554 542 aa12.28□□□□□ -0.44
LINC00488-201ENST00000494582 INTS3Q68E01 1043 aaKnown RBP12.28□□□□□ -0.44
LINC00488-201ENST00000494582 FAM184AQ8NB25 1140 aa12.28□□□□□ -0.44
LINC00488-201ENST00000494582 ALDH1L2Q3SY69 923 aa12.28□□□□□ -0.44
LINC00488-201ENST00000494582 RSPH4AQ5TD94 716 aa12.28□□□□□ -0.44
LINC00488-201ENST00000494582 SYAP1Q96A49 352 aaPredicted RBP12.28□□□□□ -0.44
LINC00488-201ENST00000494582 DNAJC5BQ9UF47 199 aa12.28□□□□□ -0.44
LINC00488-201ENST00000494582 PIK3R4Q99570 1358 aa12.27□□□□□ -0.44
LINC00488-201ENST00000494582 KIAA1210Q9ULL0 1709 aa12.27□□□□□ -0.44
LINC00488-201ENST00000494582 NEK4P51957 841 aa12.27□□□□□ -0.45
LINC00488-201ENST00000494582 CDK11BP21127 795 aaKnown RBP12.27□□□□□ -0.45
LINC00488-201ENST00000494582 MRPL50Q8N5N7 158 aaKnown RBP12.27□□□□□ -0.45
LINC00488-201ENST00000494582 TSPYL6Q8N831 410 aa12.27□□□□□ -0.45
LINC00488-201ENST00000494582 MORC2Q9Y6X9 1032 aaPredicted RBP12.27□□□□□ -0.45
LINC00488-201ENST00000494582 IL16Q14005 1332 aa12.26□□□□□ -0.45
LINC00488-201ENST00000494582 KIF18AQ8NI77 898 aa12.26□□□□□ -0.45
LINC00488-201ENST00000494582 ST7Q9NRC1 585 aa12.26□□□□□ -0.45
LINC00488-201ENST00000494582 SPAG9O60271 1321 aaKnown RBP12.26□□□□□ -0.45
LINC00488-201ENST00000494582 CHAF1AQ13111 956 aaPredicted RBP12.26□□□□□ -0.45
LINC00488-201ENST00000494582 CUL4AQ13619 759 aa12.26□□□□□ -0.45
LINC00488-201ENST00000494582 PAXIP1Q6ZW49 1069 aaPredicted RBP12.26□□□□□ -0.45
LINC00488-201ENST00000494582 FUCA2Q9BTY2 467 aa12.26□□□□□ -0.45
LINC00488-201ENST00000494582 PALD1Q9ULE6 856 aa12.26□□□□□ -0.45
LINC00488-201ENST00000494582 PHF14O94880 888 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms