RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 C14orf93Q9H972 538 aaKnown RBP16.61■□□□□ 0.25
TRIM59-206ENST00000494486 ITGAEP38570 1179 aa16.6■□□□□ 0.25
TRIM59-206ENST00000494486 NUTM2GQ5VZR2 741 aa16.6■□□□□ 0.25
TRIM59-206ENST00000494486 JMYQ8N9B5 988 aa16.6■□□□□ 0.25
TRIM59-206ENST00000494486 CDCA7Q9BWT1 371 aaPredicted RBP16.6■□□□□ 0.25
TRIM59-206ENST00000494486 COL5A2P05997 1499 aaPredicted RBP16.58■□□□□ 0.24
TRIM59-206ENST00000494486 PHRF1Q9P1Y6 1649 aaKnown RBP16.58■□□□□ 0.24
TRIM59-206ENST00000494486 LMO7Q8WWI1 1683 aa16.56■□□□□ 0.24
TRIM59-206ENST00000494486 WASLO00401 505 aaPredicted RBP16.56■□□□□ 0.24
TRIM59-206ENST00000494486 ZNF827Q17R98 1081 aa16.56■□□□□ 0.24
TRIM59-206ENST00000494486 KLRG1Q96E93 195 aa16.56■□□□□ 0.24
TRIM59-206ENST00000494486 HIRIP3Q9BW71 556 aaPredicted RBP16.56■□□□□ 0.24
TRIM59-206ENST00000494486 TULP4Q9NRJ4 1543 aa16.55■□□□□ 0.24
TRIM59-206ENST00000494486 TOMM70O94826 608 aa16.55■□□□□ 0.24
TRIM59-206ENST00000494486 LRRC37A3O60309 1634 aa16.55■□□□□ 0.24
TRIM59-206ENST00000494486 TOM1L2Q6ZVM7 507 aa16.54■□□□□ 0.24
TRIM59-206ENST00000494486 WWC3Q9ULE0 1092 aa16.54■□□□□ 0.24
TRIM59-206ENST00000494486 GCP02774 474 aa16.53■□□□□ 0.24
TRIM59-206ENST00000494486 CFAP70Q5T0N1 1121 aa16.53■□□□□ 0.24
TRIM59-206ENST00000494486 ABTB2Q8N961 1025 aa16.53■□□□□ 0.24
TRIM59-206ENST00000494486 AKT1S1Q96B36 256 aa16.53■□□□□ 0.24
TRIM59-206ENST00000494486 USP19O94966 1318 aa16.52■□□□□ 0.24
TRIM59-206ENST00000494486 MINK1Q8N4C8 1332 aaPredicted RBP16.52■□□□□ 0.24
TRIM59-206ENST00000494486 LOC105371045A0A1W2PR82 267 aa16.52■□□□□ 0.24
TRIM59-206ENST00000494486 EXOC5O00471 708 aa16.52■□□□□ 0.24
TRIM59-206ENST00000494486 SLC4A1APQ9BWU0 796 aaKnown RBP16.52■□□□□ 0.24
TRIM59-206ENST00000494486 SPATA31E1Q6ZUB1 1445 aa16.52■□□□□ 0.23
TRIM59-206ENST00000494486 PAPPAQ13219 1627 aa16.51■□□□□ 0.23
TRIM59-206ENST00000494486 NLRP13Q86W25 1043 aa16.5■□□□□ 0.23
TRIM59-206ENST00000494486 PNPLA7Q6ZV29 1317 aa16.49■□□□□ 0.23
TRIM59-206ENST00000494486 LRRC4BQ9NT99 713 aa16.49■□□□□ 0.23
TRIM59-206ENST00000494486 NUDT16Q96DE0 195 aaKnown RBP16.48■□□□□ 0.23
TRIM59-206ENST00000494486 TOPAZ1Q8N9V7 1692 aa16.48■□□□□ 0.23
TRIM59-206ENST00000494486 COL24A1Q17RW2 1714 aa16.48■□□□□ 0.23
TRIM59-206ENST00000494486 TFCP2L1Q9NZI6 479 aa16.47■□□□□ 0.23
TRIM59-206ENST00000494486 CD2APQ9Y5K6 639 aa16.47■□□□□ 0.23
TRIM59-206ENST00000494486 BRD4O60885 1362 aaPredicted RBP16.47■□□□□ 0.23
TRIM59-206ENST00000494486 SLC27A3Q5K4L6 730 aa16.46■□□□□ 0.23
TRIM59-206ENST00000494486 WDR17Q8IZU2 1322 aa16.45■□□□□ 0.22
TRIM59-206ENST00000494486 ACSBG1Q96GR2 724 aa16.45■□□□□ 0.22
TRIM59-206ENST00000494486 TRAK1Q9UPV9 953 aa16.45■□□□□ 0.22
TRIM59-206ENST00000494486 POLR3AO14802 1390 aaPredicted RBP16.45■□□□□ 0.22
TRIM59-206ENST00000494486 ACEP12821 1306 aa16.45■□□□□ 0.22
TRIM59-206ENST00000494486 ZBTB7CA1YPR0 619 aa16.44■□□□□ 0.22
TRIM59-206ENST00000494486 GOLGB1Q14789 3259 aaKnown RBP16.43■□□□□ 0.22
TRIM59-206ENST00000494486 RBM46Q8TBY0 533 aaKnown RBP16.43■□□□□ 0.22
TRIM59-206ENST00000494486 CARD10Q9BWT7 1032 aa16.43■□□□□ 0.22
TRIM59-206ENST00000494486 USP6P35125 1406 aa16.43■□□□□ 0.22
TRIM59-206ENST00000494486 AKAP12Q02952 1782 aa16.42■□□□□ 0.22
TRIM59-206ENST00000494486 HTRA3P83110 453 aa16.42■□□□□ 0.22
TRIM59-206ENST00000494486 PLEKHG3A1L390 1219 aa16.41■□□□□ 0.22
TRIM59-206ENST00000494486 WDR90Q96KV7 1748 aa16.4■□□□□ 0.22
TRIM59-206ENST00000494486 FSTL1Q12841 308 aa16.4■□□□□ 0.22
TRIM59-206ENST00000494486 AXIN2Q9Y2T1 843 aa16.39■□□□□ 0.21
TRIM59-206ENST00000494486 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.21
TRIM59-206ENST00000494486 NHSQ6T4R5 1651 aa16.39■□□□□ 0.21
TRIM59-206ENST00000494486 QSER1Q2KHR3 1735 aa16.39■□□□□ 0.21
TRIM59-206ENST00000494486 HSPA1AP0DMV8 641 aaKnown RBP16.38■□□□□ 0.21
TRIM59-206ENST00000494486 HSPA1BP0DMV9 641 aaKnown RBP16.38■□□□□ 0.21
TRIM59-206ENST00000494486 TNS2Q63HR2 1409 aa16.37■□□□□ 0.21
TRIM59-206ENST00000494486 MSH5O43196 834 aa16.37■□□□□ 0.21
TRIM59-206ENST00000494486 CSB-PGBD3P0DP91 1061 aa16.37■□□□□ 0.21
TRIM59-206ENST00000494486 ARHGEF28Q8N1W1 1705 aaKnown RBP16.36■□□□□ 0.21
TRIM59-206ENST00000494486 C16orf71Q8IYS4 520 aaPredicted RBP16.36■□□□□ 0.21
TRIM59-206ENST00000494486 CCDC7Q96M83 1385 aa16.36■□□□□ 0.21
TRIM59-206ENST00000494486 ITSN1Q15811 1721 aa16.36■□□□□ 0.21
TRIM59-206ENST00000494486 CDK19Q9BWU1 502 aa16.35■□□□□ 0.21
TRIM59-206ENST00000494486 NMRK2Q9NPI5 230 aa16.35■□□□□ 0.21
TRIM59-206ENST00000494486 NLRP6P59044 892 aa16.34■□□□□ 0.21
TRIM59-206ENST00000494486 COL23A1Q86Y22 540 aaPredicted RBP16.34■□□□□ 0.21
TRIM59-206ENST00000494486 WNK3Q9BYP7 1800 aa16.33■□□□□ 0.21
TRIM59-206ENST00000494486 MSL1Q68DK7 614 aa16.33■□□□□ 0.2
TRIM59-206ENST00000494486 ADGRB1O14514 1584 aa16.32■□□□□ 0.2
TRIM59-206ENST00000494486 IGSF1Q8N6C5 1336 aa16.32■□□□□ 0.2
TRIM59-206ENST00000494486 PPIP5K1Q6PFW1 1433 aa16.3■□□□□ 0.2
TRIM59-206ENST00000494486 KCNQ4P56696 695 aa16.3■□□□□ 0.2
TRIM59-206ENST00000494486 ARHGEF25Q86VW2 580 aa16.3■□□□□ 0.2
TRIM59-206ENST00000494486 BTAF1O14981 1849 aa16.29■□□□□ 0.2
TRIM59-206ENST00000494486 SLIT3O75094 1523 aa16.29■□□□□ 0.2
TRIM59-206ENST00000494486 ABCC6O95255 1503 aa16.29■□□□□ 0.2
TRIM59-206ENST00000494486 COL18A1P39060 1754 aa16.28■□□□□ 0.2
TRIM59-206ENST00000494486 CPSF1Q10570 1443 aaKnown RBP16.28■□□□□ 0.2
TRIM59-206ENST00000494486 TRPM1Q7Z4N2 1603 aa16.27■□□□□ 0.2
TRIM59-206ENST00000494486 FLAD1Q8NFF5 587 aa16.27■□□□□ 0.2
TRIM59-206ENST00000494486 IL2RBP14784 551 aa16.26■□□□□ 0.19
TRIM59-206ENST00000494486 KCNH5Q8NCM2 988 aa16.26■□□□□ 0.19
TRIM59-206ENST00000494486 HMGB2P26583 209 aaKnown RBP16.25■□□□□ 0.19
TRIM59-206ENST00000494486 FAM161AQ3B820 660 aa16.25■□□□□ 0.19
TRIM59-206ENST00000494486 SMC1BQ8NDV3 1235 aa16.24■□□□□ 0.19
TRIM59-206ENST00000494486 CCNL1Q9UK58 526 aaPredicted RBP16.24■□□□□ 0.19
TRIM59-206ENST00000494486 CICQ96RK0 1608 aaPredicted RBP16.23■□□□□ 0.19
TRIM59-206ENST00000494486 MPHOSPH9Q99550 1183 aa16.23■□□□□ 0.19
TRIM59-206ENST00000494486 TUBGCP6Q96RT7 1819 aa16.22■□□□□ 0.19
TRIM59-206ENST00000494486 KDM2BQ8NHM5 1336 aa16.2■□□□□ 0.18
TRIM59-206ENST00000494486 PRIM1P49642 420 aaKnown RBP16.2■□□□□ 0.18
TRIM59-206ENST00000494486 SYTL4Q96C24 671 aaPredicted RBP16.2■□□□□ 0.18
TRIM59-206ENST00000494486 PRDM10Q9NQV6 1147 aa16.2■□□□□ 0.18
TRIM59-206ENST00000494486 NLRP2Q9NX02 1062 aa16.2■□□□□ 0.18
TRIM59-206ENST00000494486 C10orf71Q711Q0 1435 aa16.19■□□□□ 0.18
TRIM59-206ENST00000494486 ARHGAP27Q6ZUM4 889 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms