RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 GJD4Q96KN9 370 aaPredicted RBP17.04■□□□□ 0.32
TRA2A-209ENST00000494255 PER1O15534 1290 aaPredicted RBP17.04■□□□□ 0.32
TRA2A-209ENST00000494255 AMPHP49418 695 aa17.04■□□□□ 0.32
TRA2A-209ENST00000494255 RGPD5Q99666 1765 aa17.03■□□□□ 0.32
TRA2A-209ENST00000494255 MAP3K19Q56UN5 1328 aa17.03■□□□□ 0.32
TRA2A-209ENST00000494255 COL5A2P05997 1499 aaPredicted RBP17.03■□□□□ 0.32
TRA2A-209ENST00000494255 FBLN1P23142 703 aa17.03■□□□□ 0.32
TRA2A-209ENST00000494255 AMER1Q5JTC6 1135 aaPredicted RBP17.03■□□□□ 0.32
TRA2A-209ENST00000494255 MORC1Q86VD1 984 aa17.03■□□□□ 0.32
TRA2A-209ENST00000494255 RRS1Q15050 365 aaKnown RBP17.02■□□□□ 0.32
TRA2A-209ENST00000494255 AXIN2Q9Y2T1 843 aa17.02■□□□□ 0.32
TRA2A-209ENST00000494255 IP6K1Q92551 441 aa17.01■□□□□ 0.31
TRA2A-209ENST00000494255 CSB-PGBD3P0DP91 1061 aa17.01■□□□□ 0.31
TRA2A-209ENST00000494255 TNNT2P45379 298 aaPredicted RBP17.01■□□□□ 0.31
TRA2A-209ENST00000494255 ILDR2Q71H61 639 aa17.01■□□□□ 0.31
TRA2A-209ENST00000494255 RTL1A6NKG5 1358 aa17■□□□□ 0.31
TRA2A-209ENST00000494255 CDK12Q9NYV4 1490 aaPredicted RBP17■□□□□ 0.31
TRA2A-209ENST00000494255 SPATA31A5Q5VU36 1347 aa17■□□□□ 0.31
TRA2A-209ENST00000494255 SPATA31A7Q8IWB4 1347 aa17■□□□□ 0.31
TRA2A-209ENST00000494255 BLMP54132 1417 aaPredicted RBP17■□□□□ 0.31
TRA2A-209ENST00000494255 CC2D1BQ5T0F9 858 aaKnown RBP17■□□□□ 0.31
TRA2A-209ENST00000494255 LARP1Q6PKG0 1096 aaKnown RBP17■□□□□ 0.31
TRA2A-209ENST00000494255 NPC1L1Q9UHC9 1359 aa17■□□□□ 0.31
TRA2A-209ENST00000494255 GLI3P10071 1580 aa16.99■□□□□ 0.31
TRA2A-209ENST00000494255 MAP2P11137 1827 aaKnown RBP16.99■□□□□ 0.31
TRA2A-209ENST00000494255 HOXC9P31274 260 aa16.99■□□□□ 0.31
TRA2A-209ENST00000494255 WDR17Q8IZU2 1322 aa16.99■□□□□ 0.31
TRA2A-209ENST00000494255 CRB1P82279 1406 aa16.99■□□□□ 0.31
TRA2A-209ENST00000494255 KIF24Q5T7B8 1368 aa16.98■□□□□ 0.31
TRA2A-209ENST00000494255 TOM1L2Q6ZVM7 507 aa16.98■□□□□ 0.31
TRA2A-209ENST00000494255 SPATA31A1Q5TZJ5 1347 aa16.98■□□□□ 0.31
TRA2A-209ENST00000494255 FLT4P35916 1363 aa16.98■□□□□ 0.31
TRA2A-209ENST00000494255 PPM1GO15355 546 aaPredicted RBP16.97■□□□□ 0.31
TRA2A-209ENST00000494255 DDX10Q13206 875 aaKnown RBP16.97■□□□□ 0.31
TRA2A-209ENST00000494255 USP35Q9P2H5 1018 aa16.97■□□□□ 0.31
TRA2A-209ENST00000494255 ZNF316A6NFI3 1004 aaPredicted RBP16.97■□□□□ 0.31
TRA2A-209ENST00000494255 CNGB1Q14028 1251 aaPredicted RBP16.97■□□□□ 0.31
TRA2A-209ENST00000494255 ANKRD24Q8TF21 1146 aa16.97■□□□□ 0.31
TRA2A-209ENST00000494255 EMILIN1Q9Y6C2 1016 aa16.97■□□□□ 0.31
TRA2A-209ENST00000494255 ERBB3P21860 1342 aa16.96■□□□□ 0.31
TRA2A-209ENST00000494255 A0A0G2JS52 829 aa16.96■□□□□ 0.31
TRA2A-209ENST00000494255 MYT1Q01538 1121 aa16.96■□□□□ 0.31
TRA2A-209ENST00000494255 RGS12O14924 1447 aa16.95■□□□□ 0.3
TRA2A-209ENST00000494255 FAM98CQ17RN3 349 aaKnown RBP16.95■□□□□ 0.3
TRA2A-209ENST00000494255 TCP11L2Q8N4U5 519 aa16.95■□□□□ 0.3
TRA2A-209ENST00000494255 LTV1Q96GA3 475 aaPredicted RBP16.95■□□□□ 0.3
TRA2A-209ENST00000494255 PEAK1Q9H792 1746 aa16.95■□□□□ 0.3
TRA2A-209ENST00000494255 POLKQ9UBT6 870 aa16.95■□□□□ 0.3
TRA2A-209ENST00000494255 SMG6Q86US8 1419 aaKnown RBP16.95■□□□□ 0.3
TRA2A-209ENST00000494255 NLRP2Q9NX02 1062 aa16.94■□□□□ 0.3
TRA2A-209ENST00000494255 THRAP3Q9Y2W1 955 aaKnown RBP16.94■□□□□ 0.3
TRA2A-209ENST00000494255 FAM208AQ9UK61 1670 aaKnown RBP16.94■□□□□ 0.3
TRA2A-209ENST00000494255 INSRP06213 1382 aa16.93■□□□□ 0.3
TRA2A-209ENST00000494255 BARGINQ6ZT62 677 aa16.93■□□□□ 0.3
TRA2A-209ENST00000494255 CARD10Q9BWT7 1032 aa16.93■□□□□ 0.3
TRA2A-209ENST00000494255 ONECUT3O60422 494 aaPredicted RBP16.92■□□□□ 0.3
TRA2A-209ENST00000494255 HSP90AB2PQ58FF8 381 aa16.92■□□□□ 0.3
TRA2A-209ENST00000494255 SEPT12Q8IYM1 358 aa16.92■□□□□ 0.3
TRA2A-209ENST00000494255 THSD7AQ9UPZ6 1657 aa16.9■□□□□ 0.3
TRA2A-209ENST00000494255 CDCA7Q9BWT1 371 aaPredicted RBP16.88■□□□□ 0.29
TRA2A-209ENST00000494255 WNK3Q9BYP7 1800 aa16.88■□□□□ 0.29
TRA2A-209ENST00000494255 BRWD3Q6RI45 1802 aa16.87■□□□□ 0.29
TRA2A-209ENST00000494255 RGPD2P0DJD1 1756 aa16.87■□□□□ 0.29
TRA2A-209ENST00000494255 MTHFSP49914 203 aa16.87■□□□□ 0.29
TRA2A-209ENST00000494255 KRT27Q7Z3Y8 459 aa16.85■□□□□ 0.29
TRA2A-209ENST00000494255 PARP4Q9UKK3 1724 aaKnown RBP16.85■□□□□ 0.29
TRA2A-209ENST00000494255 IL2RBP14784 551 aa16.85■□□□□ 0.29
TRA2A-209ENST00000494255 EIF4A2Q14240 407 aaKnown RBP16.85■□□□□ 0.29
TRA2A-209ENST00000494255 NBPF6Q5VWK0 638 aa16.85■□□□□ 0.29
TRA2A-209ENST00000494255 NBPF4Q96M43 638 aa16.85■□□□□ 0.29
TRA2A-209ENST00000494255 PDE3BQ13370 1112 aa16.84■□□□□ 0.29
TRA2A-209ENST00000494255 DISP2A7MBM2 1401 aa16.84■□□□□ 0.29
TRA2A-209ENST00000494255 PARD3Q8TEW0 1356 aa16.83■□□□□ 0.29
TRA2A-209ENST00000494255 DDB1Q16531 1140 aa16.83■□□□□ 0.28
TRA2A-209ENST00000494255 USHBP1Q8N6Y0 703 aa16.83■□□□□ 0.28
TRA2A-209ENST00000494255 PPP2R1AP30153 589 aa16.82■□□□□ 0.28
TRA2A-209ENST00000494255 RALBP1Q15311 655 aa16.82■□□□□ 0.28
TRA2A-209ENST00000494255 LRRC37A3O60309 1634 aa16.82■□□□□ 0.28
TRA2A-209ENST00000494255 RAPGEF4Q8WZA2 1011 aa16.81■□□□□ 0.28
TRA2A-209ENST00000494255 CFAP53Q96M91 514 aa16.81■□□□□ 0.28
TRA2A-209ENST00000494255 EXOC5O00471 708 aa16.81■□□□□ 0.28
TRA2A-209ENST00000494255 SOCS7O14512 581 aa16.81■□□□□ 0.28
TRA2A-209ENST00000494255 EYA1Q99502 592 aa16.81■□□□□ 0.28
TRA2A-209ENST00000494255 DIAPH1O60610 1272 aaKnown RBP16.79■□□□□ 0.28
TRA2A-209ENST00000494255 TATP17735 454 aaPredicted RBP16.79■□□□□ 0.28
TRA2A-209ENST00000494255 NCAPD2Q15021 1401 aa16.78■□□□□ 0.28
TRA2A-209ENST00000494255 TNS2Q63HR2 1409 aa16.78■□□□□ 0.28
TRA2A-209ENST00000494255 IGSF1Q8N6C5 1336 aa16.78■□□□□ 0.28
TRA2A-209ENST00000494255 IL13P35225 146 aa16.78■□□□□ 0.28
TRA2A-209ENST00000494255 MEGF6O75095 1541 aa16.77■□□□□ 0.28
TRA2A-209ENST00000494255 FAM182BQ5T319 152 aa16.76■□□□□ 0.27
TRA2A-209ENST00000494255 FAM196AQ6ZSG2 479 aa16.76■□□□□ 0.27
TRA2A-209ENST00000494255 OVOS2A0A0G2JMS6 1433 aa16.76■□□□□ 0.27
TRA2A-209ENST00000494255 ZCRB1Q8TBF4 217 aaKnown RBP16.75■□□□□ 0.27
TRA2A-209ENST00000494255 COL3A1P02461 1466 aaPredicted RBP16.75■□□□□ 0.27
TRA2A-209ENST00000494255 RGPD1P0DJD0 1748 aa16.75■□□□□ 0.27
TRA2A-209ENST00000494255 NUDCQ9Y266 331 aa16.75■□□□□ 0.27
TRA2A-209ENST00000494255 MYBBP1AQ9BQG0 1328 aaKnown RBP16.74■□□□□ 0.27
TRA2A-209ENST00000494255 PRKRIP1Q9H875 184 aaPredicted RBP16.74■□□□□ 0.27
TRA2A-209ENST00000494255 U2SURPO15042 1029 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms