RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 TCP11L2Q8N4U5 519 aa18.97■□□□□ 0.63
CTDSP1-212ENST00000494067 THRAP3Q9Y2W1 955 aaKnown RBP18.97■□□□□ 0.63
CTDSP1-212ENST00000494067 FAM196AQ6ZSG2 479 aa18.96■□□□□ 0.63
CTDSP1-212ENST00000494067 USP31Q70CQ4 1352 aa18.95■□□□□ 0.62
CTDSP1-212ENST00000494067 DISP2A7MBM2 1401 aa18.95■□□□□ 0.62
CTDSP1-212ENST00000494067 EN1Q05925 392 aaPredicted RBP18.95■□□□□ 0.62
CTDSP1-212ENST00000494067 KCNH5Q8NCM2 988 aa18.95■□□□□ 0.62
CTDSP1-212ENST00000494067 RREB1Q92766 1687 aa18.95■□□□□ 0.62
CTDSP1-212ENST00000494067 TMC1Q8TDI8 760 aa18.94■□□□□ 0.62
CTDSP1-212ENST00000494067 SBF2Q86WG5 1849 aa18.93■□□□□ 0.62
CTDSP1-212ENST00000494067 OVOS2A0A0J9YW53 1432 aa18.93■□□□□ 0.62
CTDSP1-212ENST00000494067 OVOS2Q6IE36 1432 aa18.93■□□□□ 0.62
CTDSP1-212ENST00000494067 EDC4Q6P2E9 1401 aaKnown RBP18.93■□□□□ 0.62
CTDSP1-212ENST00000494067 ABCC6O95255 1503 aa18.92■□□□□ 0.62
CTDSP1-212ENST00000494067 TRIM37O94972 964 aa18.92■□□□□ 0.62
CTDSP1-212ENST00000494067 WDR17Q8IZU2 1322 aa18.92■□□□□ 0.62
CTDSP1-212ENST00000494067 NUP188Q5SRE5 1749 aa18.91■□□□□ 0.62
CTDSP1-212ENST00000494067 MYOM1P52179 1685 aa18.91■□□□□ 0.62
CTDSP1-212ENST00000494067 USP47Q96K76 1375 aa18.91■□□□□ 0.62
CTDSP1-212ENST00000494067 C11orf95C9JLR9 678 aaPredicted RBP18.9■□□□□ 0.62
CTDSP1-212ENST00000494067 SLC24A1O60721 1099 aa18.9■□□□□ 0.62
CTDSP1-212ENST00000494067 EZH2Q15910 746 aaKnown RBP18.9■□□□□ 0.62
CTDSP1-212ENST00000494067 TOM1L2Q6ZVM7 507 aa18.9■□□□□ 0.62
CTDSP1-212ENST00000494067 HDGFL2Q7Z4V5 671 aaPredicted RBP18.9■□□□□ 0.62
CTDSP1-212ENST00000494067 PUS7Q96PZ0 661 aaKnown RBP18.89■□□□□ 0.61
CTDSP1-212ENST00000494067 CAMKK2Q96RR4 588 aa18.88■□□□□ 0.61
CTDSP1-212ENST00000494067 PSDA5PKW4 1024 aaPredicted RBP18.87■□□□□ 0.61
CTDSP1-212ENST00000494067 APBA3O96018 575 aa18.87■□□□□ 0.61
CTDSP1-212ENST00000494067 CSB-PGBD3P0DP91 1061 aa18.87■□□□□ 0.61
CTDSP1-212ENST00000494067 LRP5O75197 1615 aa18.86■□□□□ 0.61
CTDSP1-212ENST00000494067 PTF1AQ7RTS3 328 aa18.86■□□□□ 0.61
CTDSP1-212ENST00000494067 TERF2IPQ9NYB0 399 aa18.86■□□□□ 0.61
CTDSP1-212ENST00000494067 PCGF6Q9BYE7 350 aa18.85■□□□□ 0.61
CTDSP1-212ENST00000494067 OVOS2A0A0G2JMS6 1433 aa18.84■□□□□ 0.61
CTDSP1-212ENST00000494067 NINLQ9Y2I6 1382 aa18.84■□□□□ 0.61
CTDSP1-212ENST00000494067 FBLN1P23142 703 aa18.84■□□□□ 0.61
CTDSP1-212ENST00000494067 CDCA7Q9BWT1 371 aaPredicted RBP18.84■□□□□ 0.61
CTDSP1-212ENST00000494067 CARD10Q9BWT7 1032 aa18.84■□□□□ 0.61
CTDSP1-212ENST00000494067 RGPD2P0DJD1 1756 aa18.83■□□□□ 0.61
CTDSP1-212ENST00000494067 ERBB3P21860 1342 aa18.83■□□□□ 0.61
CTDSP1-212ENST00000494067 DDB1Q16531 1140 aa18.83■□□□□ 0.6
CTDSP1-212ENST00000494067 MARCH10Q8NA82 808 aaPredicted RBP18.83■□□□□ 0.6
CTDSP1-212ENST00000494067 ANKRD36BQ8N2N9 1353 aa18.82■□□□□ 0.6
CTDSP1-212ENST00000494067 KIF20BQ96Q89 1820 aa18.82■□□□□ 0.6
CTDSP1-212ENST00000494067 PARD3Q8TEW0 1356 aa18.81■□□□□ 0.6
CTDSP1-212ENST00000494067 RGPD3A6NKT7 1758 aaPredicted RBP18.81■□□□□ 0.6
CTDSP1-212ENST00000494067 RGPD4Q7Z3J3 1758 aa18.81■□□□□ 0.6
CTDSP1-212ENST00000494067 FAM208AQ9UK61 1670 aaKnown RBP18.8■□□□□ 0.6
CTDSP1-212ENST00000494067 R3HDM1Q15032 1099 aaKnown RBP18.8■□□□□ 0.6
CTDSP1-212ENST00000494067 TNS2Q63HR2 1409 aa18.8■□□□□ 0.6
CTDSP1-212ENST00000494067 NBPF14Q5TI25 921 aa18.79■□□□□ 0.6
CTDSP1-212ENST00000494067 CCDC7Q96M83 1385 aa18.79■□□□□ 0.6
CTDSP1-212ENST00000494067 ANKRD24Q8TF21 1146 aa18.78■□□□□ 0.6
CTDSP1-212ENST00000494067 SHANK3Q9BYB0 1731 aa18.77■□□□□ 0.6
CTDSP1-212ENST00000494067 CLSPNQ9HAW4 1339 aa18.77■□□□□ 0.6
CTDSP1-212ENST00000494067 BCL9O00512 1426 aa18.77■□□□□ 0.6
CTDSP1-212ENST00000494067 TMF1P82094 1093 aa18.77■□□□□ 0.6
CTDSP1-212ENST00000494067 MAP3K19Q56UN5 1328 aa18.76■□□□□ 0.59
CTDSP1-212ENST00000494067 NHSQ6T4R5 1651 aa18.76■□□□□ 0.59
CTDSP1-212ENST00000494067 EXOC5O00471 708 aa18.76■□□□□ 0.59
CTDSP1-212ENST00000494067 FYB1O15117 783 aa18.75■□□□□ 0.59
CTDSP1-212ENST00000494067 NLRP2Q9NX02 1062 aa18.75■□□□□ 0.59
CTDSP1-212ENST00000494067 IP6K1Q92551 441 aa18.74■□□□□ 0.59
CTDSP1-212ENST00000494067 CARD14Q9BXL6 1004 aa18.74■□□□□ 0.59
CTDSP1-212ENST00000494067 GGNBP2Q9H3C7 697 aa18.74■□□□□ 0.59
CTDSP1-212ENST00000494067 TIMELESSQ9UNS1 1208 aa18.74■□□□□ 0.59
CTDSP1-212ENST00000494067 CDCA8Q53HL2 280 aa18.73■□□□□ 0.59
CTDSP1-212ENST00000494067 COG3Q96JB2 828 aa18.73■□□□□ 0.59
CTDSP1-212ENST00000494067 HOXC9P31274 260 aa18.72■□□□□ 0.59
CTDSP1-212ENST00000494067 PROM2Q8N271 834 aa18.72■□□□□ 0.59
CTDSP1-212ENST00000494067 KCNQ2O43526 872 aa18.71■□□□□ 0.59
CTDSP1-212ENST00000494067 RRS1Q15050 365 aaKnown RBP18.71■□□□□ 0.59
CTDSP1-212ENST00000494067 LTV1Q96GA3 475 aaPredicted RBP18.71■□□□□ 0.59
CTDSP1-212ENST00000494067 BCL11BQ9C0K0 894 aaPredicted RBP18.71■□□□□ 0.59
CTDSP1-212ENST00000494067 BTAF1O14981 1849 aa18.71■□□□□ 0.59
CTDSP1-212ENST00000494067 CASZ1Q86V15 1759 aa18.7■□□□□ 0.58
CTDSP1-212ENST00000494067 NSD3Q9BZ95 1437 aa18.7■□□□□ 0.58
CTDSP1-212ENST00000494067 ANO8Q9HCE9 1232 aaPredicted RBP18.7■□□□□ 0.58
CTDSP1-212ENST00000494067 ANKRD26Q9UPS8 1709 aa18.69■□□□□ 0.58
CTDSP1-212ENST00000494067 PLSCR1O15162 318 aa18.69■□□□□ 0.58
CTDSP1-212ENST00000494067 IL2RBP14784 551 aa18.69■□□□□ 0.58
CTDSP1-212ENST00000494067 MEGF6O75095 1541 aa18.69■□□□□ 0.58
CTDSP1-212ENST00000494067 DOT1LQ8TEK3 1739 aa18.67■□□□□ 0.58
CTDSP1-212ENST00000494067 ACSBG1Q96GR2 724 aa18.67■□□□□ 0.58
CTDSP1-212ENST00000494067 RTL1A6NKG5 1358 aa18.67■□□□□ 0.58
CTDSP1-212ENST00000494067 PAPPAQ13219 1627 aa18.67■□□□□ 0.58
CTDSP1-212ENST00000494067 AMPHP49418 695 aa18.66■□□□□ 0.58
CTDSP1-212ENST00000494067 CCER1Q8TC90 406 aaPredicted RBP18.65■□□□□ 0.58
CTDSP1-212ENST00000494067 PDGFDQ9GZP0 370 aaPredicted RBP18.64■□□□□ 0.57
CTDSP1-212ENST00000494067 HSPA5P11021 654 aaKnown RBP18.63■□□□□ 0.57
CTDSP1-212ENST00000494067 NBPF6Q5VWK0 638 aa18.63■□□□□ 0.57
CTDSP1-212ENST00000494067 USHBP1Q8N6Y0 703 aa18.63■□□□□ 0.57
CTDSP1-212ENST00000494067 NBPF4Q96M43 638 aa18.63■□□□□ 0.57
CTDSP1-212ENST00000494067 HSP90AB2PQ58FF8 381 aa18.62■□□□□ 0.57
CTDSP1-212ENST00000494067 EMILIN1Q9Y6C2 1016 aa18.62■□□□□ 0.57
CTDSP1-212ENST00000494067 MAP2P11137 1827 aaKnown RBP18.62■□□□□ 0.57
CTDSP1-212ENST00000494067 TXNRD1Q16881 649 aa18.61■□□□□ 0.57
CTDSP1-212ENST00000494067 INSRP06213 1382 aa18.6■□□□□ 0.57
CTDSP1-212ENST00000494067 SPON1Q9HCB6 807 aa18.6■□□□□ 0.57
CTDSP1-212ENST00000494067 NSD2O96028 1365 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms