RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 USP17L13C9JLJ4 530 aa10.64□□□□□ -0.71
SMC2-205ENST00000493955 USP17L12C9JPN9 530 aa10.64□□□□□ -0.71
SMC2-205ENST00000493955 USP17L11C9JVI0 530 aa10.64□□□□□ -0.71
SMC2-205ENST00000493955 USP17L21D6R901 530 aa10.64□□□□□ -0.71
SMC2-205ENST00000493955 USP17L18D6R9N7 530 aa10.64□□□□□ -0.71
SMC2-205ENST00000493955 USP17L22D6RA61 530 aa10.64□□□□□ -0.71
SMC2-205ENST00000493955 USP17L17D6RBQ6 530 aa10.64□□□□□ -0.71
SMC2-205ENST00000493955 USP17L19D6RCP7 530 aa10.64□□□□□ -0.71
SMC2-205ENST00000493955 USP17L20D6RJB6 530 aa10.64□□□□□ -0.71
SMC2-205ENST00000493955 LZTS3O60299 673 aaPredicted RBP10.64□□□□□ -0.71
SMC2-205ENST00000493955 USP17L24Q0WX57 530 aa10.64□□□□□ -0.71
SMC2-205ENST00000493955 SH3BP5LQ7L8J4 393 aa10.64□□□□□ -0.71
SMC2-205ENST00000493955 ZBTB33Q86T24 672 aa10.64□□□□□ -0.71
SMC2-205ENST00000493955 PHTF2Q8N3S3 785 aa10.64□□□□□ -0.71
SMC2-205ENST00000493955 CCDC24Q8N4L8 307 aa10.64□□□□□ -0.71
SMC2-205ENST00000493955 PLPP7Q8NBV4 271 aa10.64□□□□□ -0.71
SMC2-205ENST00000493955 MTRQ99707 1265 aa10.64□□□□□ -0.71
SMC2-205ENST00000493955 ATP5J2-PTCD1G3V325 749 aa10.63□□□□□ -0.71
SMC2-205ENST00000493955 MAP7D1Q3KQU3 841 aa10.62□□□□□ -0.71
SMC2-205ENST00000493955 CRTC2Q53ET0 693 aaPredicted RBP10.62□□□□□ -0.71
SMC2-205ENST00000493955 CHIC2Q9UKJ5 165 aa10.62□□□□□ -0.71
SMC2-205ENST00000493955 PTCRAQ6ISU1 281 aaPredicted RBP10.61□□□□□ -0.71
SMC2-205ENST00000493955 LARP1Q6PKG0 1096 aaKnown RBP10.61□□□□□ -0.71
SMC2-205ENST00000493955 SLC6A16Q9GZN6 736 aa10.61□□□□□ -0.71
SMC2-205ENST00000493955 ITGBL1O95965 494 aaPredicted RBP10.6□□□□□ -0.71
SMC2-205ENST00000493955 RASA1P20936 1047 aa10.6□□□□□ -0.71
SMC2-205ENST00000493955 PTK7Q13308 1070 aa10.6□□□□□ -0.71
SMC2-205ENST00000493955 MTMR7Q9Y216 660 aa10.6□□□□□ -0.71
SMC2-205ENST00000493955 EML3Q32P44 896 aa10.59□□□□□ -0.71
SMC2-205ENST00000493955 DZIP3Q86Y13 1208 aaKnown RBP10.59□□□□□ -0.71
SMC2-205ENST00000493955 CARD14Q9BXL6 1004 aa10.59□□□□□ -0.71
SMC2-205ENST00000493955 IL21Q9HBE4 155 aa10.59□□□□□ -0.71
SMC2-205ENST00000493955 GNEQ9Y223 722 aaKnown RBP10.59□□□□□ -0.71
SMC2-205ENST00000493955 TRAF7Q6Q0C0 670 aa10.58□□□□□ -0.72
SMC2-205ENST00000493955 SND1Q7KZF4 910 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMC2-205ENST00000493955 SH3RF1Q7Z6J0 888 aa10.58□□□□□ -0.72
SMC2-205ENST00000493955 MAGEB6P1A0A0J9YX57 407 aa10.58□□□□□ -0.72
SMC2-205ENST00000493955 TJAP1Q5JTD0 557 aa10.58□□□□□ -0.72
SMC2-205ENST00000493955 BPHLQ86WA6 291 aaPredicted RBP10.57□□□□□ -0.72
SMC2-205ENST00000493955 FAM200AQ8TCP9 573 aa10.57□□□□□ -0.72
SMC2-205ENST00000493955 ZNF516Q92618 1163 aa10.57□□□□□ -0.72
SMC2-205ENST00000493955 TRIM50Q86XT4 487 aa10.56□□□□□ -0.72
SMC2-205ENST00000493955 ANKMY2Q8IV38 441 aa10.56□□□□□ -0.72
SMC2-205ENST00000493955 OGFOD1Q8N543 542 aa10.56□□□□□ -0.72
SMC2-205ENST00000493955 CDCA7Q9BWT1 371 aaPredicted RBP10.56□□□□□ -0.72
SMC2-205ENST00000493955 DOLKQ9UPQ8 538 aa10.56□□□□□ -0.72
SMC2-205ENST00000493955 AGERQ15109 404 aa10.55□□□□□ -0.72
SMC2-205ENST00000493955 CCDC27Q2M243 656 aa10.55□□□□□ -0.72
SMC2-205ENST00000493955 ERFEQ4G0M1 354 aa10.55□□□□□ -0.72
SMC2-205ENST00000493955 BAP1Q92560 729 aa10.55□□□□□ -0.72
SMC2-205ENST00000493955 NOD1Q9Y239 953 aa10.55□□□□□ -0.72
SMC2-205ENST00000493955 ATP1A2P50993 1020 aa10.54□□□□□ -0.72
SMC2-205ENST00000493955 ZNF511Q8NB15 262 aa10.54□□□□□ -0.72
SMC2-205ENST00000493955 CCER1Q8TC90 406 aaPredicted RBP10.54□□□□□ -0.72
SMC2-205ENST00000493955 CLP1Q92989 425 aaKnown RBP10.54□□□□□ -0.72
SMC2-205ENST00000493955 CLDN10P78369 228 aa10.53□□□□□ -0.72
SMC2-205ENST00000493955 FAM69CQ0P6D2 419 aa10.53□□□□□ -0.72
SMC2-205ENST00000493955 LINC01559Q495D7 138 aa10.53□□□□□ -0.72
SMC2-205ENST00000493955 PHLDB3Q6NSJ2 640 aa10.53□□□□□ -0.72
SMC2-205ENST00000493955 SLC10A4Q96EP9 437 aa10.53□□□□□ -0.72
SMC2-205ENST00000493955 ZNF594Q96JF6 807 aaPredicted RBP10.53□□□□□ -0.72
SMC2-205ENST00000493955 CCDC85AQ96PX6 553 aaPredicted RBP10.53□□□□□ -0.72
SMC2-205ENST00000493955 DNAAF2Q9NVR5 837 aaKnown RBP10.53□□□□□ -0.72
SMC2-205ENST00000493955 FCF1Q9Y324 198 aaKnown RBP10.53□□□□□ -0.72
SMC2-205ENST00000493955 S1PR4O95977 384 aa10.52□□□□□ -0.73
SMC2-205ENST00000493955 SSFA2P28290 1259 aa10.52□□□□□ -0.73
SMC2-205ENST00000493955 DPYDQ12882 1025 aa10.52□□□□□ -0.73
SMC2-205ENST00000493955 TSGA10IPQ3SY00 556 aa10.52□□□□□ -0.73
SMC2-205ENST00000493955 RNF20Q5VTR2 975 aa10.52□□□□□ -0.73
SMC2-205ENST00000493955 TXNDC2Q86VQ3 553 aa10.52□□□□□ -0.73
SMC2-205ENST00000493955 FOXJ1Q92949 421 aa10.52□□□□□ -0.73
SMC2-205ENST00000493955 GIGYF1O75420 1035 aaPredicted RBP10.51□□□□□ -0.73
SMC2-205ENST00000493955 KCNC4Q03721 635 aa10.51□□□□□ -0.73
SMC2-205ENST00000493955 SWI5Q1ZZU3 235 aa10.51□□□□□ -0.73
SMC2-205ENST00000493955 FOXD4L5Q5VV16 416 aaPredicted RBP10.51□□□□□ -0.73
SMC2-205ENST00000493955 FOXD4L4Q8WXT5 416 aaPredicted RBP10.51□□□□□ -0.73
SMC2-205ENST00000493955 NBPF20Q3BBV1 942 aa10.5□□□□□ -0.73
SMC2-205ENST00000493955 OXLD1Q5BKU9 147 aa10.5□□□□□ -0.73
SMC2-205ENST00000493955 C4orf48Q5BLP8 95 aa10.5□□□□□ -0.73
SMC2-205ENST00000493955 LARGE2Q8N3Y3 721 aa10.5□□□□□ -0.73
SMC2-205ENST00000493955 SLAIN2Q9P270 581 aa10.5□□□□□ -0.73
SMC2-205ENST00000493955 C1QTNF2Q9BXJ5 285 aa10.5□□□□□ -0.73
SMC2-205ENST00000493955 ATP2B4P23634 1241 aa10.49□□□□□ -0.73
SMC2-205ENST00000493955 ARID4AP29374 1257 aaPredicted RBP10.49□□□□□ -0.73
SMC2-205ENST00000493955 GTF2IP78347 998 aa10.49□□□□□ -0.73
SMC2-205ENST00000493955 SIX5Q8N196 739 aa10.49□□□□□ -0.73
SMC2-205ENST00000493955 NKX2-3Q8TAU0 364 aa10.49□□□□□ -0.73
SMC2-205ENST00000493955 CDV3Q9UKY7 258 aaKnown RBP10.48□□□□□ -0.73
SMC2-205ENST00000493955 KIAA1024Q9UPX6 916 aa10.48□□□□□ -0.73
SMC2-205ENST00000493955 SIRT1Q96EB6 747 aa10.47□□□□□ -0.73
SMC2-205ENST00000493955 RBM19Q9Y4C8 960 aaKnown RBP10.47□□□□□ -0.73
SMC2-205ENST00000493955 ESPNB1AK53 854 aa10.46□□□□□ -0.74
SMC2-205ENST00000493955 CCDC125Q86Z20 511 aa10.46□□□□□ -0.74
SMC2-205ENST00000493955 TRMT44Q8IYL2 757 aaKnown RBP10.46□□□□□ -0.74
SMC2-205ENST00000493955 SEPT12Q8IYM1 358 aa10.46□□□□□ -0.74
SMC2-205ENST00000493955 ZBTB7BO15156 539 aaPredicted RBP10.45□□□□□ -0.74
SMC2-205ENST00000493955 DKK1O94907 266 aa10.45□□□□□ -0.74
SMC2-205ENST00000493955 SEC13P55735 322 aa10.45□□□□□ -0.74
SMC2-205ENST00000493955 SH3BP2P78314 561 aa10.45□□□□□ -0.74
SMC2-205ENST00000493955 LAPTM4AQ15012 233 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms