RNA–Protein interactions for RNA: ENST00000493814.1

C1orf43-209, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2

Gene C1orf43, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-209ENST00000493814 USP35Q9P2H5 1018 aa12.81□□□□□ -0.36
C1orf43-209ENST00000493814 SBF2Q86WG5 1849 aa12.81□□□□□ -0.36
C1orf43-209ENST00000493814 USP31Q70CQ4 1352 aa12.81□□□□□ -0.36
C1orf43-209ENST00000493814 LRRC37A3O60309 1634 aa12.8□□□□□ -0.36
C1orf43-209ENST00000493814 SF3B2Q13435 895 aaKnown RBP12.8□□□□□ -0.36
C1orf43-209ENST00000493814 SOX12O15370 315 aa12.79□□□□□ -0.36
C1orf43-209ENST00000493814 TMF1P82094 1093 aa12.79□□□□□ -0.36
C1orf43-209ENST00000493814 BARGINQ6ZT62 677 aa12.79□□□□□ -0.36
C1orf43-209ENST00000493814 THRAP3Q9Y2W1 955 aaKnown RBP12.79□□□□□ -0.36
C1orf43-209ENST00000493814 FAM208AQ9UK61 1670 aaKnown RBP12.79□□□□□ -0.36
C1orf43-209ENST00000493814 ARHGEF25Q86VW2 580 aa12.78□□□□□ -0.36
C1orf43-209ENST00000493814 NME9Q86XW9 330 aa12.78□□□□□ -0.36
C1orf43-209ENST00000493814 TCP11L2Q8N4U5 519 aa12.78□□□□□ -0.36
C1orf43-209ENST00000493814 CCER1Q8TC90 406 aaPredicted RBP12.78□□□□□ -0.36
C1orf43-209ENST00000493814 ZRANB1Q9UGI0 708 aa12.78□□□□□ -0.36
C1orf43-209ENST00000493814 FAM182BQ5T319 152 aa12.77□□□□□ -0.37
C1orf43-209ENST00000493814 OVOS2A0A0J9YW53 1432 aa12.77□□□□□ -0.37
C1orf43-209ENST00000493814 OVOS2Q6IE36 1432 aa12.77□□□□□ -0.37
C1orf43-209ENST00000493814 PEAK1Q9H792 1746 aa12.76□□□□□ -0.37
C1orf43-209ENST00000493814 TOM1L2Q6ZVM7 507 aa12.76□□□□□ -0.37
C1orf43-209ENST00000493814 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
C1orf43-209ENST00000493814 WDR17Q8IZU2 1322 aa12.76□□□□□ -0.37
C1orf43-209ENST00000493814 ANKRD36BQ8N2N9 1353 aa12.76□□□□□ -0.37
C1orf43-209ENST00000493814 RGPD2P0DJD1 1756 aa12.75□□□□□ -0.37
C1orf43-209ENST00000493814 PDE3BQ13370 1112 aa12.75□□□□□ -0.37
C1orf43-209ENST00000493814 CDCA8Q53HL2 280 aa12.75□□□□□ -0.37
C1orf43-209ENST00000493814 DEFB132Q7Z7B7 95 aa12.75□□□□□ -0.37
C1orf43-209ENST00000493814 RREB1Q92766 1687 aa12.74□□□□□ -0.37
C1orf43-209ENST00000493814 BAG6P46379 1132 aa12.74□□□□□ -0.37
C1orf43-209ENST00000493814 CSB-PGBD3P0DP91 1061 aa12.73□□□□□ -0.37
C1orf43-209ENST00000493814 FAM196AQ6ZSG2 479 aa12.73□□□□□ -0.37
C1orf43-209ENST00000493814 ANKRD26Q9UPS8 1709 aa12.73□□□□□ -0.37
C1orf43-209ENST00000493814 RGPD3A6NKT7 1758 aaPredicted RBP12.72□□□□□ -0.37
C1orf43-209ENST00000493814 RGPD4Q7Z3J3 1758 aa12.72□□□□□ -0.37
C1orf43-209ENST00000493814 DISP2A7MBM2 1401 aa12.71□□□□□ -0.37
C1orf43-209ENST00000493814 NUP188Q5SRE5 1749 aa12.71□□□□□ -0.37
C1orf43-209ENST00000493814 CCDC7Q96M83 1385 aa12.71□□□□□ -0.37
C1orf43-209ENST00000493814 COG3Q96JB2 828 aa12.71□□□□□ -0.37
C1orf43-209ENST00000493814 CARD10Q9BWT7 1032 aa12.71□□□□□ -0.37
C1orf43-209ENST00000493814 OVOS2A0A0G2JMS6 1433 aa12.71□□□□□ -0.38
C1orf43-209ENST00000493814 MAP2P11137 1827 aaKnown RBP12.7□□□□□ -0.38
C1orf43-209ENST00000493814 TRIM37O94972 964 aa12.7□□□□□ -0.38
C1orf43-209ENST00000493814 DDB1Q16531 1140 aa12.7□□□□□ -0.38
C1orf43-209ENST00000493814 CDCA7Q9BWT1 371 aaPredicted RBP12.7□□□□□ -0.38
C1orf43-209ENST00000493814 ERBB3P21860 1342 aa12.69□□□□□ -0.38
C1orf43-209ENST00000493814 C11orf95C9JLR9 678 aaPredicted RBP12.69□□□□□ -0.38
C1orf43-209ENST00000493814 EN1Q05925 392 aaPredicted RBP12.69□□□□□ -0.38
C1orf43-209ENST00000493814 KAT6BQ8WYB5 2073 aa12.68□□□□□ -0.38
C1orf43-209ENST00000493814 NHSQ6T4R5 1651 aa12.67□□□□□ -0.38
C1orf43-209ENST00000493814 EIF4G2P78344 907 aaKnown RBP eCLIP12.67□□□□□ -0.38
C1orf43-209ENST00000493814 ANKRD24Q8TF21 1146 aa12.67□□□□□ -0.38
C1orf43-209ENST00000493814 TNS2Q63HR2 1409 aa12.67□□□□□ -0.38
C1orf43-209ENST00000493814 SHANK3Q9BYB0 1731 aa12.66□□□□□ -0.38
C1orf43-209ENST00000493814 NSD3Q9BZ95 1437 aa12.66□□□□□ -0.38
C1orf43-209ENST00000493814 FYB1O15117 783 aa12.66□□□□□ -0.38
C1orf43-209ENST00000493814 APBA3O96018 575 aa12.66□□□□□ -0.38
C1orf43-209ENST00000493814 IP6K1Q92551 441 aa12.66□□□□□ -0.38
C1orf43-209ENST00000493814 GGNBP2Q9H3C7 697 aa12.66□□□□□ -0.38
C1orf43-209ENST00000493814 NLRP2Q9NX02 1062 aa12.66□□□□□ -0.38
C1orf43-209ENST00000493814 PARD3Q8TEW0 1356 aa12.66□□□□□ -0.38
C1orf43-209ENST00000493814 HSPA5P11021 654 aaKnown RBP12.65□□□□□ -0.38
C1orf43-209ENST00000493814 EZH2Q15910 746 aaKnown RBP12.65□□□□□ -0.38
C1orf43-209ENST00000493814 RTL1A6NKG5 1358 aa12.65□□□□□ -0.38
C1orf43-209ENST00000493814 LRP5O75197 1615 aa12.65□□□□□ -0.38
C1orf43-209ENST00000493814 MAP3K19Q56UN5 1328 aa12.64□□□□□ -0.39
C1orf43-209ENST00000493814 EXOC5O00471 708 aa12.64□□□□□ -0.39
C1orf43-209ENST00000493814 HOXC9P31274 260 aa12.64□□□□□ -0.39
C1orf43-209ENST00000493814 AMPHP49418 695 aa12.64□□□□□ -0.39
C1orf43-209ENST00000493814 POLR3GLQ9BT43 218 aa12.64□□□□□ -0.39
C1orf43-209ENST00000493814 BTAF1O14981 1849 aa12.64□□□□□ -0.39
C1orf43-209ENST00000493814 BCL9O00512 1426 aa12.63□□□□□ -0.39
C1orf43-209ENST00000493814 IL2RBP14784 551 aa12.63□□□□□ -0.39
C1orf43-209ENST00000493814 FBLN1P23142 703 aa12.63□□□□□ -0.39
C1orf43-209ENST00000493814 MARCH10Q8NA82 808 aaPredicted RBP12.63□□□□□ -0.39
C1orf43-209ENST00000493814 CAMKK2Q96RR4 588 aa12.63□□□□□ -0.39
C1orf43-209ENST00000493814 DOT1LQ8TEK3 1739 aa12.62□□□□□ -0.39
C1orf43-209ENST00000493814 LTV1Q96GA3 475 aaPredicted RBP12.62□□□□□ -0.39
C1orf43-209ENST00000493814 CARD14Q9BXL6 1004 aa12.62□□□□□ -0.39
C1orf43-209ENST00000493814 SMG6Q86US8 1419 aaKnown RBP12.62□□□□□ -0.39
C1orf43-209ENST00000493814 PSDA5PKW4 1024 aaPredicted RBP12.61□□□□□ -0.39
C1orf43-209ENST00000493814 RRS1Q15050 365 aaKnown RBP12.61□□□□□ -0.39
C1orf43-209ENST00000493814 CGNL1Q0VF96 1302 aa12.6□□□□□ -0.39
C1orf43-209ENST00000493814 FLT4P35916 1363 aa12.59□□□□□ -0.39
C1orf43-209ENST00000493814 KIF24Q5T7B8 1368 aa12.59□□□□□ -0.39
C1orf43-209ENST00000493814 BCL11BQ9C0K0 894 aaPredicted RBP12.59□□□□□ -0.39
C1orf43-209ENST00000493814 INSRP06213 1382 aa12.58□□□□□ -0.4
C1orf43-209ENST00000493814 PLSCR1O15162 318 aa12.58□□□□□ -0.4
C1orf43-209ENST00000493814 R3HDM1Q15032 1099 aaKnown RBP12.58□□□□□ -0.4
C1orf43-209ENST00000493814 PKD1L3Q7Z443 1732 aa12.58□□□□□ -0.4
C1orf43-209ENST00000493814 PTF1AQ7RTS3 328 aa12.57□□□□□ -0.4
C1orf43-209ENST00000493814 MEGF6O75095 1541 aa12.57□□□□□ -0.4
C1orf43-209ENST00000493814 NBPF14Q5TI25 921 aa12.56□□□□□ -0.4
C1orf43-209ENST00000493814 LY75O60449 1722 aa12.56□□□□□ -0.4
C1orf43-209ENST00000493814 CASZ1Q86V15 1759 aa12.56□□□□□ -0.4
C1orf43-209ENST00000493814 ITGB4P16144 1822 aa12.55□□□□□ -0.4
C1orf43-209ENST00000493814 SRCAPQ6ZRS2 3230 aa12.55□□□□□ -0.4
C1orf43-209ENST00000493814 HSP90AB2PQ58FF8 381 aa12.55□□□□□ -0.4
C1orf43-209ENST00000493814 NBPF6Q5VWK0 638 aa12.55□□□□□ -0.4
C1orf43-209ENST00000493814 ACSBG1Q96GR2 724 aa12.55□□□□□ -0.4
C1orf43-209ENST00000493814 NBPF4Q96M43 638 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms