RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 SLC12A5Q9H2X9 1139 aa20.73■□□□□ 0.91
ATG4B-223ENST00000493618 THRAP3Q9Y2W1 955 aaKnown RBP20.73■□□□□ 0.91
ATG4B-223ENST00000493618 SBF2Q86WG5 1849 aa20.73■□□□□ 0.91
ATG4B-223ENST00000493618 ARHGEF25Q86VW2 580 aa20.72■□□□□ 0.91
ATG4B-223ENST00000493618 NME9Q86XW9 330 aa20.72■□□□□ 0.91
ATG4B-223ENST00000493618 KCNH5Q8NCM2 988 aa20.72■□□□□ 0.91
ATG4B-223ENST00000493618 EZH2Q15910 746 aaKnown RBP20.71■□□□□ 0.91
ATG4B-223ENST00000493618 PEAK1Q9H792 1746 aa20.7■□□□□ 0.9
ATG4B-223ENST00000493618 ST20-MTHFSA0A0A6YYL1 179 aa20.7■□□□□ 0.9
ATG4B-223ENST00000493618 HDGFL2Q7Z4V5 671 aaPredicted RBP20.7■□□□□ 0.9
ATG4B-223ENST00000493618 RREB1Q92766 1687 aa20.7■□□□□ 0.9
ATG4B-223ENST00000493618 DISP2A7MBM2 1401 aa20.7■□□□□ 0.9
ATG4B-223ENST00000493618 APBA3O96018 575 aa20.69■□□□□ 0.9
ATG4B-223ENST00000493618 WDR17Q8IZU2 1322 aa20.69■□□□□ 0.9
ATG4B-223ENST00000493618 NUP188Q5SRE5 1749 aa20.68■□□□□ 0.9
ATG4B-223ENST00000493618 CSB-PGBD3P0DP91 1061 aa20.68■□□□□ 0.9
ATG4B-223ENST00000493618 A0A1W2PP64 1363 aa20.68■□□□□ 0.9
ATG4B-223ENST00000493618 TESK2Q96S53 571 aa20.67■□□□□ 0.9
ATG4B-223ENST00000493618 USP31Q70CQ4 1352 aa20.67■□□□□ 0.9
ATG4B-223ENST00000493618 EDC4Q6P2E9 1401 aaKnown RBP20.66■□□□□ 0.9
ATG4B-223ENST00000493618 LRP5O75197 1615 aa20.65■□□□□ 0.9
ATG4B-223ENST00000493618 CAMKK2Q96RR4 588 aa20.65■□□□□ 0.9
ATG4B-223ENST00000493618 TERF2IPQ9NYB0 399 aa20.65■□□□□ 0.9
ATG4B-223ENST00000493618 ABCC6O95255 1503 aa20.64■□□□□ 0.9
ATG4B-223ENST00000493618 R3HDM1Q15032 1099 aaKnown RBP20.64■□□□□ 0.89
ATG4B-223ENST00000493618 DDB1Q16531 1140 aa20.64■□□□□ 0.89
ATG4B-223ENST00000493618 OVOS2A0A0G2JMS6 1433 aa20.62■□□□□ 0.89
ATG4B-223ENST00000493618 OVOS2A0A0J9YW53 1432 aa20.62■□□□□ 0.89
ATG4B-223ENST00000493618 OVOS2Q6IE36 1432 aa20.62■□□□□ 0.89
ATG4B-223ENST00000493618 PCGF6Q9BYE7 350 aa20.62■□□□□ 0.89
ATG4B-223ENST00000493618 USP47Q96K76 1375 aa20.61■□□□□ 0.89
ATG4B-223ENST00000493618 PUS7Q96PZ0 661 aaKnown RBP20.61■□□□□ 0.89
ATG4B-223ENST00000493618 CARD10Q9BWT7 1032 aa20.61■□□□□ 0.89
ATG4B-223ENST00000493618 RGPD2P0DJD1 1756 aa20.59■□□□□ 0.89
ATG4B-223ENST00000493618 MARCH10Q8NA82 808 aaPredicted RBP20.58■□□□□ 0.89
ATG4B-223ENST00000493618 PARD3Q8TEW0 1356 aa20.58■□□□□ 0.88
ATG4B-223ENST00000493618 RGPD3A6NKT7 1758 aaPredicted RBP20.57■□□□□ 0.88
ATG4B-223ENST00000493618 RGPD4Q7Z3J3 1758 aa20.57■□□□□ 0.88
ATG4B-223ENST00000493618 PTF1AQ7RTS3 328 aa20.57■□□□□ 0.88
ATG4B-223ENST00000493618 CDCA7Q9BWT1 371 aaPredicted RBP20.57■□□□□ 0.88
ATG4B-223ENST00000493618 KIF20BQ96Q89 1820 aa20.57■□□□□ 0.88
ATG4B-223ENST00000493618 CCDC7Q96M83 1385 aa20.57■□□□□ 0.88
ATG4B-223ENST00000493618 NINLQ9Y2I6 1382 aa20.57■□□□□ 0.88
ATG4B-223ENST00000493618 NLRP2Q9NX02 1062 aa20.56■□□□□ 0.88
ATG4B-223ENST00000493618 ERBB3P21860 1342 aa20.55■□□□□ 0.88
ATG4B-223ENST00000493618 TMF1P82094 1093 aa20.55■□□□□ 0.88
ATG4B-223ENST00000493618 ANKRD24Q8TF21 1146 aa20.55■□□□□ 0.88
ATG4B-223ENST00000493618 MYOM1P52179 1685 aa20.54■□□□□ 0.88
ATG4B-223ENST00000493618 FAM208AQ9UK61 1670 aaKnown RBP20.54■□□□□ 0.88
ATG4B-223ENST00000493618 C11orf95C9JLR9 678 aaPredicted RBP20.54■□□□□ 0.88
ATG4B-223ENST00000493618 EXOC5O00471 708 aa20.53■□□□□ 0.88
ATG4B-223ENST00000493618 FBLN1P23142 703 aa20.53■□□□□ 0.88
ATG4B-223ENST00000493618 LTV1Q96GA3 475 aaPredicted RBP20.53■□□□□ 0.88
ATG4B-223ENST00000493618 ANKRD36BQ8N2N9 1353 aa20.53■□□□□ 0.88
ATG4B-223ENST00000493618 TNS2Q63HR2 1409 aa20.53■□□□□ 0.88
ATG4B-223ENST00000493618 SLC24A1O60721 1099 aa20.52■□□□□ 0.88
ATG4B-223ENST00000493618 COG3Q96JB2 828 aa20.52■□□□□ 0.88
ATG4B-223ENST00000493618 NHSQ6T4R5 1651 aa20.51■□□□□ 0.87
ATG4B-223ENST00000493618 KAT6BQ8WYB5 2073 aa20.51■□□□□ 0.87
ATG4B-223ENST00000493618 NBPF14Q5TI25 921 aa20.5■□□□□ 0.87
ATG4B-223ENST00000493618 BCL11BQ9C0K0 894 aaPredicted RBP20.5■□□□□ 0.87
ATG4B-223ENST00000493618 IP6K1Q92551 441 aa20.49■□□□□ 0.87
ATG4B-223ENST00000493618 IL2RBP14784 551 aa20.48■□□□□ 0.87
ATG4B-223ENST00000493618 GGNBP2Q9H3C7 697 aa20.48■□□□□ 0.87
ATG4B-223ENST00000493618 MAP3K19Q56UN5 1328 aa20.48■□□□□ 0.87
ATG4B-223ENST00000493618 BCL9O00512 1426 aa20.47■□□□□ 0.87
ATG4B-223ENST00000493618 ACSBG1Q96GR2 724 aa20.47■□□□□ 0.87
ATG4B-223ENST00000493618 BTAF1O14981 1849 aa20.47■□□□□ 0.87
ATG4B-223ENST00000493618 PLSCR1O15162 318 aa20.46■□□□□ 0.87
ATG4B-223ENST00000493618 KCNQ2O43526 872 aa20.46■□□□□ 0.87
ATG4B-223ENST00000493618 AMPHP49418 695 aa20.46■□□□□ 0.87
ATG4B-223ENST00000493618 FYB1O15117 783 aa20.45■□□□□ 0.86
ATG4B-223ENST00000493618 HOXC9P31274 260 aa20.45■□□□□ 0.86
ATG4B-223ENST00000493618 SHANK3Q9BYB0 1731 aa20.44■□□□□ 0.86
ATG4B-223ENST00000493618 RRS1Q15050 365 aaKnown RBP20.44■□□□□ 0.86
ATG4B-223ENST00000493618 TIMELESSQ9UNS1 1208 aa20.44■□□□□ 0.86
ATG4B-223ENST00000493618 CLSPNQ9HAW4 1339 aa20.44■□□□□ 0.86
ATG4B-223ENST00000493618 CDCA8Q53HL2 280 aa20.43■□□□□ 0.86
ATG4B-223ENST00000493618 PROM2Q8N271 834 aa20.43■□□□□ 0.86
ATG4B-223ENST00000493618 ANO8Q9HCE9 1232 aaPredicted RBP20.43■□□□□ 0.86
ATG4B-223ENST00000493618 CASZ1Q86V15 1759 aa20.43■□□□□ 0.86
ATG4B-223ENST00000493618 DOT1LQ8TEK3 1739 aa20.41■□□□□ 0.86
ATG4B-223ENST00000493618 DDX54Q8TDD1 881 aaKnown RBP20.4■□□□□ 0.86
ATG4B-223ENST00000493618 POLR3GLQ9BT43 218 aa20.4■□□□□ 0.86
ATG4B-223ENST00000493618 CARD14Q9BXL6 1004 aa20.4■□□□□ 0.86
ATG4B-223ENST00000493618 NSD3Q9BZ95 1437 aa20.4■□□□□ 0.86
ATG4B-223ENST00000493618 TXNRD1Q16881 649 aa20.39■□□□□ 0.85
ATG4B-223ENST00000493618 CCER1Q8TC90 406 aaPredicted RBP20.39■□□□□ 0.85
ATG4B-223ENST00000493618 MAP2P11137 1827 aaKnown RBP20.39■□□□□ 0.85
ATG4B-223ENST00000493618 RTL1A6NKG5 1358 aa20.38■□□□□ 0.85
ATG4B-223ENST00000493618 MEGF6O75095 1541 aa20.37■□□□□ 0.85
ATG4B-223ENST00000493618 USHBP1Q8N6Y0 703 aa20.37■□□□□ 0.85
ATG4B-223ENST00000493618 PDGFDQ9GZP0 370 aaPredicted RBP20.36■□□□□ 0.85
ATG4B-223ENST00000493618 NBPF6Q5VWK0 638 aa20.35■□□□□ 0.85
ATG4B-223ENST00000493618 NBPF4Q96M43 638 aa20.35■□□□□ 0.85
ATG4B-223ENST00000493618 ANKRD26Q9UPS8 1709 aa20.35■□□□□ 0.85
ATG4B-223ENST00000493618 HSP90AB2PQ58FF8 381 aa20.34■□□□□ 0.85
ATG4B-223ENST00000493618 SMG6Q86US8 1419 aaKnown RBP20.34■□□□□ 0.85
ATG4B-223ENST00000493618 PAPPAQ13219 1627 aa20.34■□□□□ 0.85
ATG4B-223ENST00000493618 SPON1Q9HCB6 807 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms