RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 ATMINO43313 823 aaPredicted RBP10.58□□□□□ -0.72
CAB39-206ENST00000493540 NLRP6P59044 892 aa10.58□□□□□ -0.72
CAB39-206ENST00000493540 TRPC5Q9UL62 973 aaPredicted RBP10.58□□□□□ -0.72
CAB39-206ENST00000493540 TRIM35Q9UPQ4 493 aa10.58□□□□□ -0.72
CAB39-206ENST00000493540 SBF2Q86WG5 1849 aa10.57□□□□□ -0.72
CAB39-206ENST00000493540 ASTLQ6HA08 431 aaPredicted RBP10.57□□□□□ -0.72
CAB39-206ENST00000493540 PPARGC1BQ86YN6 1023 aaKnown RBP10.57□□□□□ -0.72
CAB39-206ENST00000493540 NGLY1Q96IV0 654 aa10.57□□□□□ -0.72
CAB39-206ENST00000493540 NRKQ7Z2Y5 1582 aa10.56□□□□□ -0.72
CAB39-206ENST00000493540 ATN1P54259 1190 aaPredicted RBP10.56□□□□□ -0.72
CAB39-206ENST00000493540 USP21Q9UK80 565 aa10.56□□□□□ -0.72
CAB39-206ENST00000493540 PHF8Q9UPP1 1060 aa10.56□□□□□ -0.72
CAB39-206ENST00000493540 BLMP54132 1417 aaPredicted RBP10.56□□□□□ -0.72
CAB39-206ENST00000493540 NUP188Q5SRE5 1749 aa10.55□□□□□ -0.72
CAB39-206ENST00000493540 ATP7BP35670 1465 aa10.55□□□□□ -0.72
CAB39-206ENST00000493540 ADAMTS2O95450 1211 aa10.55□□□□□ -0.72
CAB39-206ENST00000493540 PARP4Q9UKK3 1724 aaKnown RBP10.55□□□□□ -0.72
CAB39-206ENST00000493540 FBXO22Q8NEZ5 403 aa10.54□□□□□ -0.72
CAB39-206ENST00000493540 MPHOSPH9Q99550 1183 aa10.54□□□□□ -0.72
CAB39-206ENST00000493540 C14orf93Q9H972 538 aaKnown RBP10.54□□□□□ -0.72
CAB39-206ENST00000493540 ACIN1Q9UKV3 1341 aaKnown RBP10.54□□□□□ -0.72
CAB39-206ENST00000493540 WAPLQ7Z5K2 1190 aa10.53□□□□□ -0.72
CAB39-206ENST00000493540 PEAK1Q9H792 1746 aa10.53□□□□□ -0.72
CAB39-206ENST00000493540 ARHGEF10O15013 1369 aa10.52□□□□□ -0.72
CAB39-206ENST00000493540 AKAP12Q02952 1782 aa10.52□□□□□ -0.72
CAB39-206ENST00000493540 DISP2A7MBM2 1401 aa10.52□□□□□ -0.73
CAB39-206ENST00000493540 FOXO3O43524 673 aa10.52□□□□□ -0.73
CAB39-206ENST00000493540 ESCO1Q5FWF5 840 aa10.52□□□□□ -0.73
CAB39-206ENST00000493540 CCDC125Q86Z20 511 aa10.52□□□□□ -0.73
CAB39-206ENST00000493540 GJD4Q96KN9 370 aaPredicted RBP10.52□□□□□ -0.73
CAB39-206ENST00000493540 TSHZ2Q9NRE2 1034 aa10.52□□□□□ -0.73
CAB39-206ENST00000493540 USP54Q70EL1 1684 aa10.52□□□□□ -0.73
CAB39-206ENST00000493540 QRICH2Q9H0J4 1663 aa10.52□□□□□ -0.73
CAB39-206ENST00000493540 ONECUT3O60422 494 aaPredicted RBP10.51□□□□□ -0.73
CAB39-206ENST00000493540 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.51□□□□□ -0.73
CAB39-206ENST00000493540 COL18A1P39060 1754 aa10.51□□□□□ -0.73
CAB39-206ENST00000493540 UNC5CLQ8IV45 518 aa10.5□□□□□ -0.73
CAB39-206ENST00000493540 PELP1Q8IZL8 1130 aaKnown RBP10.5□□□□□ -0.73
CAB39-206ENST00000493540 VSIG10Q8N0Z9 540 aa10.5□□□□□ -0.73
CAB39-206ENST00000493540 DHX57Q6P158 1386 aaKnown RBP10.5□□□□□ -0.73
CAB39-206ENST00000493540 RAB3GAP2Q9H2M9 1393 aa10.5□□□□□ -0.73
CAB39-206ENST00000493540 IER5LQ5T953 404 aa10.49□□□□□ -0.73
CAB39-206ENST00000493540 TMEM132EQ6IEE7 984 aa10.49□□□□□ -0.73
CAB39-206ENST00000493540 PCDH10Q9P2E7 1040 aa10.49□□□□□ -0.73
CAB39-206ENST00000493540 EIF3AQ14152 1382 aaKnown RBP10.49□□□□□ -0.73
CAB39-206ENST00000493540 RGPD5Q99666 1765 aa10.49□□□□□ -0.73
CAB39-206ENST00000493540 XPCQ01831 940 aaPredicted RBP10.48□□□□□ -0.73
CAB39-206ENST00000493540 VPS72Q15906 364 aa10.48□□□□□ -0.73
CAB39-206ENST00000493540 PRR36Q9H6K5 1346 aa10.48□□□□□ -0.73
CAB39-206ENST00000493540 LRRC37A3O60309 1634 aa10.47□□□□□ -0.73
CAB39-206ENST00000493540 PIK3C2AO00443 1686 aa10.47□□□□□ -0.73
CAB39-206ENST00000493540 MS4A4AQ96JQ5 239 aa10.47□□□□□ -0.73
CAB39-206ENST00000493540 TRPM1Q7Z4N2 1603 aa10.47□□□□□ -0.73
CAB39-206ENST00000493540 PPP1R37O75864 691 aa10.46□□□□□ -0.73
CAB39-206ENST00000493540 MON2Q7Z3U7 1717 aa10.46□□□□□ -0.74
CAB39-206ENST00000493540 POLR3AO14802 1390 aaPredicted RBP10.45□□□□□ -0.74
CAB39-206ENST00000493540 RGL3Q3MIN7 710 aa10.45□□□□□ -0.74
CAB39-206ENST00000493540 CFAP70Q5T0N1 1121 aa10.45□□□□□ -0.74
CAB39-206ENST00000493540 KRT28Q7Z3Y7 464 aa10.45□□□□□ -0.74
CAB39-206ENST00000493540 STK26Q9P289 416 aa10.45□□□□□ -0.74
CAB39-206ENST00000493540 CASZ1Q86V15 1759 aa10.44□□□□□ -0.74
CAB39-206ENST00000493540 SLIT3O75094 1523 aa10.44□□□□□ -0.74
CAB39-206ENST00000493540 IRX5P78411 483 aaPredicted RBP10.44□□□□□ -0.74
CAB39-206ENST00000493540 PRAM1Q96QH2 718 aa10.44□□□□□ -0.74
CAB39-206ENST00000493540 METRNQ9UJH8 293 aa10.44□□□□□ -0.74
CAB39-206ENST00000493540 NUTM2FA1L443 756 aa10.43□□□□□ -0.74
CAB39-206ENST00000493540 SLC39A7Q92504 469 aa10.43□□□□□ -0.74
CAB39-206ENST00000493540 OCEL1Q9H607 264 aa10.43□□□□□ -0.74
CAB39-206ENST00000493540 CAMTA1Q9Y6Y1 1673 aa10.43□□□□□ -0.74
CAB39-206ENST00000493540 STAC3Q96MF2 364 aa10.42□□□□□ -0.74
CAB39-206ENST00000493540 FAM83GA6ND36 823 aa10.41□□□□□ -0.74
CAB39-206ENST00000493540 C7P10643 843 aa10.41□□□□□ -0.74
CAB39-206ENST00000493540 PLCG2P16885 1265 aa10.41□□□□□ -0.74
CAB39-206ENST00000493540 PSME1Q06323 249 aa10.41□□□□□ -0.74
CAB39-206ENST00000493540 ABCC6O95255 1503 aa10.41□□□□□ -0.74
CAB39-206ENST00000493540 COL24A1Q17RW2 1714 aa10.41□□□□□ -0.74
CAB39-206ENST00000493540 SPATA31A5Q5VU36 1347 aa10.4□□□□□ -0.74
CAB39-206ENST00000493540 SPATA31A7Q8IWB4 1347 aa10.4□□□□□ -0.74
CAB39-206ENST00000493540 LTN1O94822 1766 aa10.4□□□□□ -0.74
CAB39-206ENST00000493540 SEC24BO95487 1268 aa10.4□□□□□ -0.74
CAB39-206ENST00000493540 SEPT12Q8IYM1 358 aa10.4□□□□□ -0.74
CAB39-206ENST00000493540 CABLES1Q8TDN4 633 aa10.4□□□□□ -0.74
CAB39-206ENST00000493540 KDM2AQ9Y2K7 1162 aa10.4□□□□□ -0.74
CAB39-206ENST00000493540 CPDO75976 1380 aa10.39□□□□□ -0.75
CAB39-206ENST00000493540 USP19O94966 1318 aa10.39□□□□□ -0.75
CAB39-206ENST00000493540 QSER1Q2KHR3 1735 aa10.39□□□□□ -0.75
CAB39-206ENST00000493540 HRCP23327 699 aa10.39□□□□□ -0.75
CAB39-206ENST00000493540 MAMSTRQ6ZN01 415 aa10.39□□□□□ -0.75
CAB39-206ENST00000493540 PDCD7Q8N8D1 485 aaKnown RBP10.39□□□□□ -0.75
CAB39-206ENST00000493540 WASLO00401 505 aaPredicted RBP10.38□□□□□ -0.75
CAB39-206ENST00000493540 POTEJP0CG39 1038 aa10.38□□□□□ -0.75
CAB39-206ENST00000493540 DPY19L2Q6NUT2 758 aa10.38□□□□□ -0.75
CAB39-206ENST00000493540 KRT27Q7Z3Y8 459 aa10.38□□□□□ -0.75
CAB39-206ENST00000493540 SSH2Q76I76 1423 aa10.38□□□□□ -0.75
CAB39-206ENST00000493540 GPRASP1Q5JY77 1395 aa10.38□□□□□ -0.75
CAB39-206ENST00000493540 COL5A2P05997 1499 aaPredicted RBP10.37□□□□□ -0.75
CAB39-206ENST00000493540 DEFB132Q7Z7B7 95 aa10.37□□□□□ -0.75
CAB39-206ENST00000493540 FAM163AQ96GL9 167 aaPredicted RBP10.37□□□□□ -0.75
CAB39-206ENST00000493540 PARD3Q8TEW0 1356 aa10.37□□□□□ -0.75
CAB39-206ENST00000493540 NHSQ6T4R5 1651 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms