RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 EN1Q05925 392 aaPredicted RBP12.48□□□□□ -0.41
COL6A4P1-203ENST00000491915 PDE3BQ13370 1112 aa12.48□□□□□ -0.41
COL6A4P1-203ENST00000491915 SF3B2Q13435 895 aaKnown RBP12.48□□□□□ -0.41
COL6A4P1-203ENST00000491915 FAM196AQ6ZSG2 479 aa12.48□□□□□ -0.41
COL6A4P1-203ENST00000491915 WDR17Q8IZU2 1322 aa12.47□□□□□ -0.41
COL6A4P1-203ENST00000491915 FYB1O15117 783 aa12.47□□□□□ -0.41
COL6A4P1-203ENST00000491915 CARD14Q9BXL6 1004 aa12.47□□□□□ -0.41
COL6A4P1-203ENST00000491915 THSD7AQ9UPZ6 1657 aa12.47□□□□□ -0.41
COL6A4P1-203ENST00000491915 CRB1P82279 1406 aa12.46□□□□□ -0.41
COL6A4P1-203ENST00000491915 EDC4Q6P2E9 1401 aaKnown RBP12.46□□□□□ -0.41
COL6A4P1-203ENST00000491915 CSB-PGBD3P0DP91 1061 aa12.46□□□□□ -0.41
COL6A4P1-203ENST00000491915 CARD10Q9BWT7 1032 aa12.46□□□□□ -0.41
COL6A4P1-203ENST00000491915 NFAT5O94916 1531 aa12.46□□□□□ -0.42
COL6A4P1-203ENST00000491915 MON2Q7Z3U7 1717 aa12.45□□□□□ -0.42
COL6A4P1-203ENST00000491915 GGNBP2Q9H3C7 697 aa12.45□□□□□ -0.42
COL6A4P1-203ENST00000491915 RGPD5Q99666 1765 aa12.45□□□□□ -0.42
COL6A4P1-203ENST00000491915 HSPA5P11021 654 aaKnown RBP12.44□□□□□ -0.42
COL6A4P1-203ENST00000491915 BAG6P46379 1132 aa12.44□□□□□ -0.42
COL6A4P1-203ENST00000491915 EZH2Q15910 746 aaKnown RBP12.44□□□□□ -0.42
COL6A4P1-203ENST00000491915 PTF1AQ7RTS3 328 aa12.44□□□□□ -0.42
COL6A4P1-203ENST00000491915 MARCH10Q8NA82 808 aaPredicted RBP12.44□□□□□ -0.42
COL6A4P1-203ENST00000491915 IP6K1Q92551 441 aa12.44□□□□□ -0.42
COL6A4P1-203ENST00000491915 COG3Q96JB2 828 aa12.44□□□□□ -0.42
COL6A4P1-203ENST00000491915 CAMKK2Q96RR4 588 aa12.44□□□□□ -0.42
COL6A4P1-203ENST00000491915 DDB1Q16531 1140 aa12.43□□□□□ -0.42
COL6A4P1-203ENST00000491915 CDCA8Q53HL2 280 aa12.43□□□□□ -0.42
COL6A4P1-203ENST00000491915 ANKRD24Q8TF21 1146 aa12.43□□□□□ -0.42
COL6A4P1-203ENST00000491915 NLRP2Q9NX02 1062 aa12.43□□□□□ -0.42
COL6A4P1-203ENST00000491915 ANKRD36BQ8N2N9 1353 aa12.43□□□□□ -0.42
COL6A4P1-203ENST00000491915 NINLQ9Y2I6 1382 aa12.43□□□□□ -0.42
COL6A4P1-203ENST00000491915 C11orf95C9JLR9 678 aaPredicted RBP12.42□□□□□ -0.42
COL6A4P1-203ENST00000491915 APBA3O96018 575 aa12.42□□□□□ -0.42
COL6A4P1-203ENST00000491915 LTV1Q96GA3 475 aaPredicted RBP12.42□□□□□ -0.42
COL6A4P1-203ENST00000491915 OVOS2A0A0J9YW53 1432 aa12.42□□□□□ -0.42
COL6A4P1-203ENST00000491915 OVOS2Q6IE36 1432 aa12.42□□□□□ -0.42
COL6A4P1-203ENST00000491915 MAP3K19Q56UN5 1328 aa12.41□□□□□ -0.42
COL6A4P1-203ENST00000491915 EP400Q96L91 3159 aa12.41□□□□□ -0.42
COL6A4P1-203ENST00000491915 EIF4G2P78344 907 aaKnown RBP eCLIP12.41□□□□□ -0.42
COL6A4P1-203ENST00000491915 RRS1Q15050 365 aaKnown RBP12.41□□□□□ -0.42
COL6A4P1-203ENST00000491915 POLR3GLQ9BT43 218 aa12.41□□□□□ -0.42
COL6A4P1-203ENST00000491915 ERBB3P21860 1342 aa12.4□□□□□ -0.42
COL6A4P1-203ENST00000491915 EXOC5O00471 708 aa12.4□□□□□ -0.42
COL6A4P1-203ENST00000491915 CDCA7Q9BWT1 371 aaPredicted RBP12.4□□□□□ -0.42
COL6A4P1-203ENST00000491915 PSDA5PKW4 1024 aaPredicted RBP12.39□□□□□ -0.43
COL6A4P1-203ENST00000491915 HOXC9P31274 260 aa12.39□□□□□ -0.43
COL6A4P1-203ENST00000491915 DISP2A7MBM2 1401 aa12.38□□□□□ -0.43
COL6A4P1-203ENST00000491915 AMPHP49418 695 aa12.38□□□□□ -0.43
COL6A4P1-203ENST00000491915 USP54Q70EL1 1684 aa12.38□□□□□ -0.43
COL6A4P1-203ENST00000491915 CCDC7Q96M83 1385 aa12.37□□□□□ -0.43
COL6A4P1-203ENST00000491915 KCNQ2O43526 872 aa12.36□□□□□ -0.43
COL6A4P1-203ENST00000491915 IL2RBP14784 551 aa12.36□□□□□ -0.43
COL6A4P1-203ENST00000491915 R3HDM1Q15032 1099 aaKnown RBP12.36□□□□□ -0.43
COL6A4P1-203ENST00000491915 HSP90AB2PQ58FF8 381 aa12.36□□□□□ -0.43
COL6A4P1-203ENST00000491915 NBPF6Q5VWK0 638 aa12.36□□□□□ -0.43
COL6A4P1-203ENST00000491915 PROM2Q8N271 834 aa12.36□□□□□ -0.43
COL6A4P1-203ENST00000491915 NBPF4Q96M43 638 aa12.36□□□□□ -0.43
COL6A4P1-203ENST00000491915 BCL11BQ9C0K0 894 aaPredicted RBP12.36□□□□□ -0.43
COL6A4P1-203ENST00000491915 PANK3Q9H999 370 aa12.36□□□□□ -0.43
COL6A4P1-203ENST00000491915 PARP4Q9UKK3 1724 aaKnown RBP12.35□□□□□ -0.43
COL6A4P1-203ENST00000491915 LTN1O94822 1766 aa12.34□□□□□ -0.43
COL6A4P1-203ENST00000491915 PLSCR1O15162 318 aa12.34□□□□□ -0.43
COL6A4P1-203ENST00000491915 NSD3Q9BZ95 1437 aa12.34□□□□□ -0.43
COL6A4P1-203ENST00000491915 ABCC6O95255 1503 aa12.33□□□□□ -0.44
COL6A4P1-203ENST00000491915 USHBP1Q8N6Y0 703 aa12.33□□□□□ -0.44
COL6A4P1-203ENST00000491915 ACSBG1Q96GR2 724 aa12.33□□□□□ -0.44
COL6A4P1-203ENST00000491915 EMILIN1Q9Y6C2 1016 aa12.33□□□□□ -0.44
COL6A4P1-203ENST00000491915 OVOS2A0A0G2JMS6 1433 aa12.33□□□□□ -0.44
COL6A4P1-203ENST00000491915 RGPD1P0DJD0 1748 aa12.33□□□□□ -0.44
COL6A4P1-203ENST00000491915 PEAK1Q9H792 1746 aa12.33□□□□□ -0.44
COL6A4P1-203ENST00000491915 TNS1Q9HBL0 1735 aaKnown RBP12.33□□□□□ -0.44
COL6A4P1-203ENST00000491915 DDX54Q8TDD1 881 aaKnown RBP12.32□□□□□ -0.44
COL6A4P1-203ENST00000491915 BCL9O00512 1426 aa12.31□□□□□ -0.44
COL6A4P1-203ENST00000491915 LRRC37A3O60309 1634 aa12.31□□□□□ -0.44
COL6A4P1-203ENST00000491915 TNNT2P45379 298 aaPredicted RBP12.31□□□□□ -0.44
COL6A4P1-203ENST00000491915 POLKQ9UBT6 870 aa12.31□□□□□ -0.44
COL6A4P1-203ENST00000491915 SBF2Q86WG5 1849 aa12.3□□□□□ -0.44
COL6A4P1-203ENST00000491915 PPM1GO15355 546 aaPredicted RBP12.3□□□□□ -0.44
COL6A4P1-203ENST00000491915 CGNL1Q0VF96 1302 aa12.3□□□□□ -0.44
COL6A4P1-203ENST00000491915 KAT6BQ8WYB5 2073 aa12.3□□□□□ -0.44
COL6A4P1-203ENST00000491915 MYOM1P52179 1685 aa12.29□□□□□ -0.44
COL6A4P1-203ENST00000491915 ZCRB1Q8TBF4 217 aaKnown RBP12.29□□□□□ -0.44
COL6A4P1-203ENST00000491915 INSRP06213 1382 aa12.29□□□□□ -0.44
COL6A4P1-203ENST00000491915 PARD3Q8TEW0 1356 aa12.29□□□□□ -0.44
COL6A4P1-203ENST00000491915 RGPD2P0DJD1 1756 aa12.28□□□□□ -0.44
COL6A4P1-203ENST00000491915 TXNRD1Q16881 649 aa12.28□□□□□ -0.44
COL6A4P1-203ENST00000491915 NBPF14Q5TI25 921 aa12.28□□□□□ -0.44
COL6A4P1-203ENST00000491915 TNS2Q63HR2 1409 aa12.28□□□□□ -0.44
COL6A4P1-203ENST00000491915 WNK3Q9BYP7 1800 aa12.27□□□□□ -0.44
COL6A4P1-203ENST00000491915 PRIM1P49642 420 aaKnown RBP12.27□□□□□ -0.45
COL6A4P1-203ENST00000491915 PDGFDQ9GZP0 370 aaPredicted RBP12.27□□□□□ -0.45
COL6A4P1-203ENST00000491915 ANO8Q9HCE9 1232 aaPredicted RBP12.27□□□□□ -0.45
COL6A4P1-203ENST00000491915 KIF7Q2M1P5 1343 aa12.27□□□□□ -0.45
COL6A4P1-203ENST00000491915 WASHC2AQ641Q2 1341 aa12.27□□□□□ -0.45
COL6A4P1-203ENST00000491915 RTL1A6NKG5 1358 aa12.27□□□□□ -0.45
COL6A4P1-203ENST00000491915 EYA1Q99502 592 aa12.26□□□□□ -0.45
COL6A4P1-203ENST00000491915 FLT4P35916 1363 aa12.26□□□□□ -0.45
COL6A4P1-203ENST00000491915 PER1O15534 1290 aaPredicted RBP12.25□□□□□ -0.45
COL6A4P1-203ENST00000491915 MEGF6O75095 1541 aa12.25□□□□□ -0.45
COL6A4P1-203ENST00000491915 TATP17735 454 aaPredicted RBP12.24□□□□□ -0.45
COL6A4P1-203ENST00000491915 KIF24Q5T7B8 1368 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms