RNA–Protein interactions for RNA: ENST00000491789.1

VPS45-209, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 976 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-209ENST00000491789 RGPD8O14715 1765 aaPredicted RBP10.02□□□□□ -0.81
VPS45-209ENST00000491789 C11orf95C9JLR9 678 aaPredicted RBP10.02□□□□□ -0.81
VPS45-209ENST00000491789 NLRP6P59044 892 aa10.02□□□□□ -0.81
VPS45-209ENST00000491789 PRKRIP1Q9H875 184 aaPredicted RBP10.02□□□□□ -0.81
VPS45-209ENST00000491789 PHF8Q9UPP1 1060 aa10.02□□□□□ -0.81
VPS45-209ENST00000491789 ST20-MTHFSA0A0A6YYL1 179 aa10.01□□□□□ -0.81
VPS45-209ENST00000491789 SOS2Q07890 1332 aaPredicted RBP10.01□□□□□ -0.81
VPS45-209ENST00000491789 PNPLA6Q8IY17 1366 aa10.01□□□□□ -0.81
VPS45-209ENST00000491789 TMF1P82094 1093 aa10□□□□□ -0.81
VPS45-209ENST00000491789 WAPLQ7Z5K2 1190 aa10□□□□□ -0.81
VPS45-209ENST00000491789 GTF3C3Q9Y5Q9 886 aa10□□□□□ -0.81
VPS45-209ENST00000491789 AFF2P51816 1311 aa10□□□□□ -0.81
VPS45-209ENST00000491789 RXRBP28702 533 aa9.99□□□□□ -0.81
VPS45-209ENST00000491789 TMEM132EQ6IEE7 984 aa9.99□□□□□ -0.81
VPS45-209ENST00000491789 UPF1Q92900 1129 aaKnown RBP eCLIP9.99□□□□□ -0.81
VPS45-209ENST00000491789 SBNO2Q9Y2G9 1366 aa9.99□□□□□ -0.81
VPS45-209ENST00000491789 KNDC1Q76NI1 1749 aa9.99□□□□□ -0.81
VPS45-209ENST00000491789 RALBP1Q15311 655 aa9.98□□□□□ -0.81
VPS45-209ENST00000491789 STK26Q9P289 416 aa9.98□□□□□ -0.81
VPS45-209ENST00000491789 MARF1Q9Y4F3 1742 aaKnown RBP9.98□□□□□ -0.81
VPS45-209ENST00000491789 C8orf37Q96NL8 207 aa9.97□□□□□ -0.81
VPS45-209ENST00000491789 QTRT2Q9H974 415 aaKnown RBP9.97□□□□□ -0.81
VPS45-209ENST00000491789 PLEKHH1Q9ULM0 1364 aa9.97□□□□□ -0.81
VPS45-209ENST00000491789 COL22A1Q8NFW1 1626 aaPredicted RBP9.96□□□□□ -0.81
VPS45-209ENST00000491789 NUTM2FA1L443 756 aa9.96□□□□□ -0.82
VPS45-209ENST00000491789 ADAMTS2O95450 1211 aa9.96□□□□□ -0.82
VPS45-209ENST00000491789 NBPF1Q3BBV0 1214 aa9.96□□□□□ -0.82
VPS45-209ENST00000491789 ESCO1Q5FWF5 840 aa9.96□□□□□ -0.82
VPS45-209ENST00000491789 HS3ST6Q96QI5 342 aa9.96□□□□□ -0.82
VPS45-209ENST00000491789 TESK2Q96S53 571 aa9.96□□□□□ -0.82
VPS45-209ENST00000491789 KRTAP3-3Q9BYR6 98 aa9.96□□□□□ -0.82
VPS45-209ENST00000491789 KRTAP3-2Q9BYR7 98 aa9.96□□□□□ -0.82
VPS45-209ENST00000491789 ABCC11Q96J66 1382 aa9.96□□□□□ -0.82
VPS45-209ENST00000491789 TECPR2O15040 1411 aa9.96□□□□□ -0.82
VPS45-209ENST00000491789 PIK3C2GO75747 1445 aa9.96□□□□□ -0.82
VPS45-209ENST00000491789 CDC42BPGQ6DT37 1551 aa9.96□□□□□ -0.82
VPS45-209ENST00000491789 FMN2Q9NZ56 1722 aa9.96□□□□□ -0.82
VPS45-209ENST00000491789 FOXO3O43524 673 aa9.95□□□□□ -0.82
VPS45-209ENST00000491789 MICALL2Q8IY33 904 aa9.95□□□□□ -0.82
VPS45-209ENST00000491789 NGLY1Q96IV0 654 aa9.95□□□□□ -0.82
VPS45-209ENST00000491789 C14orf93Q9H972 538 aaKnown RBP9.95□□□□□ -0.82
VPS45-209ENST00000491789 LRPPRCP42704 1394 aaKnown RBP9.95□□□□□ -0.82
VPS45-209ENST00000491789 CDK12Q9NYV4 1490 aaPredicted RBP9.95□□□□□ -0.82
VPS45-209ENST00000491789 PXDNQ92626 1479 aa9.94□□□□□ -0.82
VPS45-209ENST00000491789 BRD4O60885 1362 aaPredicted RBP9.94□□□□□ -0.82
VPS45-209ENST00000491789 MYBBP1AQ9BQG0 1328 aaKnown RBP9.94□□□□□ -0.82
VPS45-209ENST00000491789 RBM6P78332 1123 aaKnown RBP9.94□□□□□ -0.82
VPS45-209ENST00000491789 XPCQ01831 940 aaPredicted RBP9.94□□□□□ -0.82
VPS45-209ENST00000491789 CFAP70Q5T0N1 1121 aa9.94□□□□□ -0.82
VPS45-209ENST00000491789 MRS2Q9HD23 443 aa9.94□□□□□ -0.82
VPS45-209ENST00000491789 RGS12O14924 1447 aa9.93□□□□□ -0.82
VPS45-209ENST00000491789 YTHDC2Q9H6S0 1430 aaKnown RBP9.93□□□□□ -0.82
VPS45-209ENST00000491789 INSRP06213 1382 aa9.93□□□□□ -0.82
VPS45-209ENST00000491789 FAM205CA6NFA0 338 aa9.93□□□□□ -0.82
VPS45-209ENST00000491789 FNBP4Q8N3X1 1017 aaPredicted RBP9.93□□□□□ -0.82
VPS45-209ENST00000491789 MS4A4AQ96JQ5 239 aa9.93□□□□□ -0.82
VPS45-209ENST00000491789 POLR3GLQ9BT43 218 aa9.93□□□□□ -0.82
VPS45-209ENST00000491789 PARD3Q8TEW0 1356 aa9.92□□□□□ -0.82
VPS45-209ENST00000491789 ZNF710Q8N1W2 664 aa9.92□□□□□ -0.82
VPS45-209ENST00000491789 SIRT1Q96EB6 747 aa9.92□□□□□ -0.82
VPS45-209ENST00000491789 USP21Q9UK80 565 aa9.92□□□□□ -0.82
VPS45-209ENST00000491789 NPC1L1Q9UHC9 1359 aa9.91□□□□□ -0.82
VPS45-209ENST00000491789 NPHP3Q7Z494 1330 aa9.91□□□□□ -0.82
VPS45-209ENST00000491789 MFRPQ9BY79 579 aa9.91□□□□□ -0.82
VPS45-209ENST00000491789 ADGRB1O14514 1584 aa9.91□□□□□ -0.82
VPS45-209ENST00000491789 ZBED9Q6R2W3 1325 aa9.9□□□□□ -0.82
VPS45-209ENST00000491789 NLRP13Q86W25 1043 aa9.9□□□□□ -0.82
VPS45-209ENST00000491789 PUS7Q96PZ0 661 aaKnown RBP9.9□□□□□ -0.82
VPS45-209ENST00000491789 BCL9LQ86UU0 1499 aa9.9□□□□□ -0.83
VPS45-209ENST00000491789 USP32Q8NFA0 1604 aa9.89□□□□□ -0.83
VPS45-209ENST00000491789 SPATA31A3Q5VYP0 1347 aa9.89□□□□□ -0.83
VPS45-209ENST00000491789 RIMBP2O15034 1052 aa9.89□□□□□ -0.83
VPS45-209ENST00000491789 NEFLP07196 543 aa9.89□□□□□ -0.83
VPS45-209ENST00000491789 HNRNPUQ00839 825 aaKnown RBP eCLIP9.89□□□□□ -0.83
VPS45-209ENST00000491789 KRT28Q7Z3Y7 464 aa9.89□□□□□ -0.83
VPS45-209ENST00000491789 FBXO22Q8NEZ5 403 aa9.89□□□□□ -0.83
VPS45-209ENST00000491789 TRPC5Q9UL62 973 aaPredicted RBP9.89□□□□□ -0.83
VPS45-209ENST00000491789 KIF1AQ12756 1690 aa9.89□□□□□ -0.83
VPS45-209ENST00000491789 ATRNO75882 1429 aa9.89□□□□□ -0.83
VPS45-209ENST00000491789 BRWD3Q6RI45 1802 aa9.89□□□□□ -0.83
VPS45-209ENST00000491789 SAFB2Q14151 953 aaKnown RBP eCLIP9.88□□□□□ -0.83
VPS45-209ENST00000491789 DOK7Q18PE1 504 aa9.88□□□□□ -0.83
VPS45-209ENST00000491789 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.87□□□□□ -0.83
VPS45-209ENST00000491789 CENPJQ9HC77 1338 aaPredicted RBP9.87□□□□□ -0.83
VPS45-209ENST00000491789 PRAM1Q96QH2 718 aa9.87□□□□□ -0.83
VPS45-209ENST00000491789 POTEB3A0JP26 581 aa9.86□□□□□ -0.83
VPS45-209ENST00000491789 PER1O15534 1290 aaPredicted RBP9.86□□□□□ -0.83
VPS45-209ENST00000491789 POTEBQ6S5H4 581 aa9.86□□□□□ -0.83
VPS45-209ENST00000491789 HS6ST3Q8IZP7 471 aa9.86□□□□□ -0.83
VPS45-209ENST00000491789 TMC1Q8TDI8 760 aa9.86□□□□□ -0.83
VPS45-209ENST00000491789 CABLES1Q8TDN4 633 aa9.86□□□□□ -0.83
VPS45-209ENST00000491789 ABCA3Q99758 1704 aa9.86□□□□□ -0.83
VPS45-209ENST00000491789 MYOM1P52179 1685 aa9.86□□□□□ -0.83
VPS45-209ENST00000491789 DLC1Q96QB1 1528 aa9.86□□□□□ -0.83
VPS45-209ENST00000491789 NINLQ9Y2I6 1382 aa9.86□□□□□ -0.83
VPS45-209ENST00000491789 GLI3P10071 1580 aa9.85□□□□□ -0.83
VPS45-209ENST00000491789 PMFBP1Q8TBY8 1022 aa9.85□□□□□ -0.83
VPS45-209ENST00000491789 GJD4Q96KN9 370 aaPredicted RBP9.85□□□□□ -0.83
VPS45-209ENST00000491789 TRAK1Q9UPV9 953 aa9.85□□□□□ -0.83
VPS45-209ENST00000491789 KNSTRNQ9Y448 316 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms