RNA–Protein interactions for RNA: ENST00000491651.1

SMARCD3-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 4

Gene SMARCD3, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-214ENST00000491651 PARP4Q9UKK3 1724 aaKnown RBP24.48■■□□□ 1.51
SMARCD3-214ENST00000491651 CRB1P82279 1406 aa24.47■■□□□ 1.51
SMARCD3-214ENST00000491651 LARP1Q6PKG0 1096 aaKnown RBP24.47■■□□□ 1.51
SMARCD3-214ENST00000491651 ARHGEF25Q86VW2 580 aa24.47■■□□□ 1.51
SMARCD3-214ENST00000491651 OVOS2A0A0J9YW53 1432 aa24.46■■□□□ 1.51
SMARCD3-214ENST00000491651 OVOS2Q6IE36 1432 aa24.46■■□□□ 1.51
SMARCD3-214ENST00000491651 SOX12O15370 315 aa24.46■■□□□ 1.51
SMARCD3-214ENST00000491651 RGPD1P0DJD0 1748 aa24.46■■□□□ 1.51
SMARCD3-214ENST00000491651 BLMP54132 1417 aaPredicted RBP24.45■■□□□ 1.51
SMARCD3-214ENST00000491651 BARGINQ6ZT62 677 aa24.45■■□□□ 1.5
SMARCD3-214ENST00000491651 TCP11L2Q8N4U5 519 aa24.44■■□□□ 1.5
SMARCD3-214ENST00000491651 USP35Q9P2H5 1018 aa24.44■■□□□ 1.5
SMARCD3-214ENST00000491651 THRAP3Q9Y2W1 955 aaKnown RBP24.44■■□□□ 1.5
SMARCD3-214ENST00000491651 ZRANB1Q9UGI0 708 aa24.43■■□□□ 1.5
SMARCD3-214ENST00000491651 WDR17Q8IZU2 1322 aa24.4■■□□□ 1.5
SMARCD3-214ENST00000491651 EIF4G2P78344 907 aaKnown RBP eCLIP24.4■■□□□ 1.5
SMARCD3-214ENST00000491651 FAM208AQ9UK61 1670 aaKnown RBP24.4■■□□□ 1.5
SMARCD3-214ENST00000491651 LRRC37A3O60309 1634 aa24.39■■□□□ 1.5
SMARCD3-214ENST00000491651 SF3B2Q13435 895 aaKnown RBP24.38■■□□□ 1.49
SMARCD3-214ENST00000491651 TOM1L2Q6ZVM7 507 aa24.38■■□□□ 1.49
SMARCD3-214ENST00000491651 AXIN2Q9Y2T1 843 aa24.38■■□□□ 1.49
SMARCD3-214ENST00000491651 TNS1Q9HBL0 1735 aaKnown RBP24.38■■□□□ 1.49
SMARCD3-214ENST00000491651 COG3Q96JB2 828 aa24.37■■□□□ 1.49
SMARCD3-214ENST00000491651 CSB-PGBD3P0DP91 1061 aa24.34■■□□□ 1.49
SMARCD3-214ENST00000491651 HSPA5P11021 654 aaKnown RBP24.34■■□□□ 1.49
SMARCD3-214ENST00000491651 CCDC7Q96M83 1385 aa24.32■■□□□ 1.48
SMARCD3-214ENST00000491651 PDE3BQ13370 1112 aa24.32■■□□□ 1.48
SMARCD3-214ENST00000491651 SBF2Q86WG5 1849 aa24.31■■□□□ 1.48
SMARCD3-214ENST00000491651 ANKRD26Q9UPS8 1709 aa24.31■■□□□ 1.48
SMARCD3-214ENST00000491651 ERBB3P21860 1342 aa24.31■■□□□ 1.48
SMARCD3-214ENST00000491651 NSD3Q9BZ95 1437 aa24.3■■□□□ 1.48
SMARCD3-214ENST00000491651 CDCA7Q9BWT1 371 aaPredicted RBP24.3■■□□□ 1.48
SMARCD3-214ENST00000491651 CARD10Q9BWT7 1032 aa24.3■■□□□ 1.48
SMARCD3-214ENST00000491651 FAM182BQ5T319 152 aa24.29■■□□□ 1.48
SMARCD3-214ENST00000491651 FAM196AQ6ZSG2 479 aa24.29■■□□□ 1.48
SMARCD3-214ENST00000491651 PEAK1Q9H792 1746 aa24.29■■□□□ 1.48
SMARCD3-214ENST00000491651 FYB1O15117 783 aa24.28■■□□□ 1.48
SMARCD3-214ENST00000491651 BAG6P46379 1132 aa24.27■■□□□ 1.48
SMARCD3-214ENST00000491651 POLR3GLQ9BT43 218 aa24.27■■□□□ 1.48
SMARCD3-214ENST00000491651 RTL1A6NKG5 1358 aa24.27■■□□□ 1.48
SMARCD3-214ENST00000491651 DISP2A7MBM2 1401 aa24.27■■□□□ 1.48
SMARCD3-214ENST00000491651 C11orf95C9JLR9 678 aaPredicted RBP24.26■■□□□ 1.47
SMARCD3-214ENST00000491651 GGNBP2Q9H3C7 697 aa24.26■■□□□ 1.47
SMARCD3-214ENST00000491651 RGPD2P0DJD1 1756 aa24.26■■□□□ 1.47
SMARCD3-214ENST00000491651 OVOS2A0A0G2JMS6 1433 aa24.26■■□□□ 1.47
SMARCD3-214ENST00000491651 DDB1Q16531 1140 aa24.25■■□□□ 1.47
SMARCD3-214ENST00000491651 IP6K1Q92551 441 aa24.25■■□□□ 1.47
SMARCD3-214ENST00000491651 MAP2P11137 1827 aaKnown RBP24.25■■□□□ 1.47
SMARCD3-214ENST00000491651 DEFB132Q7Z7B7 95 aa24.24■■□□□ 1.47
SMARCD3-214ENST00000491651 ANKRD24Q8TF21 1146 aa24.24■■□□□ 1.47
SMARCD3-214ENST00000491651 MAP3K19Q56UN5 1328 aa24.24■■□□□ 1.47
SMARCD3-214ENST00000491651 CARD14Q9BXL6 1004 aa24.23■■□□□ 1.47
SMARCD3-214ENST00000491651 AMPHP49418 695 aa24.22■■□□□ 1.47
SMARCD3-214ENST00000491651 NLRP2Q9NX02 1062 aa24.22■■□□□ 1.47
SMARCD3-214ENST00000491651 TNS2Q63HR2 1409 aa24.21■■□□□ 1.47
SMARCD3-214ENST00000491651 CGNL1Q0VF96 1302 aa24.21■■□□□ 1.47
SMARCD3-214ENST00000491651 HOXC9P31274 260 aa24.21■■□□□ 1.47
SMARCD3-214ENST00000491651 KAT6BQ8WYB5 2073 aa24.2■■□□□ 1.46
SMARCD3-214ENST00000491651 RGPD3A6NKT7 1758 aaPredicted RBP24.19■■□□□ 1.46
SMARCD3-214ENST00000491651 RGPD4Q7Z3J3 1758 aa24.19■■□□□ 1.46
SMARCD3-214ENST00000491651 TRIM37O94972 964 aa24.19■■□□□ 1.46
SMARCD3-214ENST00000491651 KIF24Q5T7B8 1368 aa24.18■■□□□ 1.46
SMARCD3-214ENST00000491651 RREB1Q92766 1687 aa24.18■■□□□ 1.46
SMARCD3-214ENST00000491651 SMG6Q86US8 1419 aaKnown RBP24.17■■□□□ 1.46
SMARCD3-214ENST00000491651 IL2RBP14784 551 aa24.16■■□□□ 1.46
SMARCD3-214ENST00000491651 FBLN1P23142 703 aa24.16■■□□□ 1.46
SMARCD3-214ENST00000491651 RRS1Q15050 365 aaKnown RBP24.16■■□□□ 1.46
SMARCD3-214ENST00000491651 BCL9O00512 1426 aa24.16■■□□□ 1.46
SMARCD3-214ENST00000491651 PARD3Q8TEW0 1356 aa24.16■■□□□ 1.46
SMARCD3-214ENST00000491651 EXOC5O00471 708 aa24.15■■□□□ 1.46
SMARCD3-214ENST00000491651 LTV1Q96GA3 475 aaPredicted RBP24.15■■□□□ 1.46
SMARCD3-214ENST00000491651 FLT4P35916 1363 aa24.15■■□□□ 1.46
SMARCD3-214ENST00000491651 NUP188Q5SRE5 1749 aa24.13■■□□□ 1.45
SMARCD3-214ENST00000491651 EN1Q05925 392 aaPredicted RBP24.13■■□□□ 1.45
SMARCD3-214ENST00000491651 NHSQ6T4R5 1651 aa24.12■■□□□ 1.45
SMARCD3-214ENST00000491651 APBA3O96018 575 aa24.12■■□□□ 1.45
SMARCD3-214ENST00000491651 MARCH10Q8NA82 808 aaPredicted RBP24.12■■□□□ 1.45
SMARCD3-214ENST00000491651 PANK3Q9H999 370 aa24.12■■□□□ 1.45
SMARCD3-214ENST00000491651 NSD2O96028 1365 aa24.11■■□□□ 1.45
SMARCD3-214ENST00000491651 INSRP06213 1382 aa24.11■■□□□ 1.45
SMARCD3-214ENST00000491651 SHANK3Q9BYB0 1731 aa24.1■■□□□ 1.45
SMARCD3-214ENST00000491651 KIF7Q2M1P5 1343 aa24.08■■□□□ 1.44
SMARCD3-214ENST00000491651 EZH2Q15910 746 aaKnown RBP24.07■■□□□ 1.44
SMARCD3-214ENST00000491651 CAMKK2Q96RR4 588 aa24.07■■□□□ 1.44
SMARCD3-214ENST00000491651 HSP90AB2PQ58FF8 381 aa24.05■■□□□ 1.44
SMARCD3-214ENST00000491651 BCL11BQ9C0K0 894 aaPredicted RBP24.05■■□□□ 1.44
SMARCD3-214ENST00000491651 EMILIN1Q9Y6C2 1016 aa24.05■■□□□ 1.44
SMARCD3-214ENST00000491651 BTAF1O14981 1849 aa24.05■■□□□ 1.44
SMARCD3-214ENST00000491651 MEGF6O75095 1541 aa24.04■■□□□ 1.44
SMARCD3-214ENST00000491651 DOT1LQ8TEK3 1739 aa24.02■■□□□ 1.44
SMARCD3-214ENST00000491651 NBPF6Q5VWK0 638 aa24.02■■□□□ 1.44
SMARCD3-214ENST00000491651 NBPF4Q96M43 638 aa24.02■■□□□ 1.44
SMARCD3-214ENST00000491651 PPM1GO15355 546 aaPredicted RBP24.01■■□□□ 1.43
SMARCD3-214ENST00000491651 KNSTRNQ9Y448 316 aa24.01■■□□□ 1.43
SMARCD3-214ENST00000491651 PKD1L3Q7Z443 1732 aa24.01■■□□□ 1.43
SMARCD3-214ENST00000491651 PLSCR1O15162 318 aa24■■□□□ 1.43
SMARCD3-214ENST00000491651 WASHC2AQ641Q2 1341 aa24■■□□□ 1.43
SMARCD3-214ENST00000491651 RAPGEF4Q8WZA2 1011 aa23.99■■□□□ 1.43
SMARCD3-214ENST00000491651 POLKQ9UBT6 870 aa23.99■■□□□ 1.43
SMARCD3-214ENST00000491651 LRP5O75197 1615 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms