RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 ZBTB7CA1YPR0 619 aa11.25□□□□□ -0.61
RNF38-209ENST00000491349 FYB1O15117 783 aa11.25□□□□□ -0.61
RNF38-209ENST00000491349 GGNBP2Q9H3C7 697 aa11.25□□□□□ -0.61
RNF38-209ENST00000491349 PRDM11Q9NQV5 511 aa11.25□□□□□ -0.61
RNF38-209ENST00000491349 ABCA3Q99758 1704 aa11.24□□□□□ -0.61
RNF38-209ENST00000491349 SOX12O15370 315 aa11.24□□□□□ -0.61
RNF38-209ENST00000491349 ADAMTS2O95450 1211 aa11.24□□□□□ -0.61
RNF38-209ENST00000491349 GCP02774 474 aa11.24□□□□□ -0.61
RNF38-209ENST00000491349 NGLY1Q96IV0 654 aa11.24□□□□□ -0.61
RNF38-209ENST00000491349 CARD14Q9BXL6 1004 aa11.24□□□□□ -0.61
RNF38-209ENST00000491349 CABLES1Q8TDN4 633 aa11.23□□□□□ -0.61
RNF38-209ENST00000491349 USP19O94966 1318 aa11.23□□□□□ -0.61
RNF38-209ENST00000491349 NPC1L1Q9UHC9 1359 aa11.23□□□□□ -0.61
RNF38-209ENST00000491349 SLIT3O75094 1523 aa11.22□□□□□ -0.61
RNF38-209ENST00000491349 AMPHP49418 695 aa11.22□□□□□ -0.61
RNF38-209ENST00000491349 COL14A1Q05707 1796 aaKnown RBP11.22□□□□□ -0.61
RNF38-209ENST00000491349 CNGB1Q14028 1251 aaPredicted RBP11.22□□□□□ -0.61
RNF38-209ENST00000491349 CC2D1BQ5T0F9 858 aaKnown RBP11.22□□□□□ -0.61
RNF38-209ENST00000491349 C8orf37Q96NL8 207 aa11.22□□□□□ -0.61
RNF38-209ENST00000491349 LTN1O94822 1766 aa11.21□□□□□ -0.61
RNF38-209ENST00000491349 CRYBG1Q9Y4K1 1723 aa11.21□□□□□ -0.61
RNF38-209ENST00000491349 OVOS2A0A0J9YW53 1432 aa11.21□□□□□ -0.61
RNF38-209ENST00000491349 OVOS2Q6IE36 1432 aa11.21□□□□□ -0.61
RNF38-209ENST00000491349 SPDYE4A6NLX3 237 aa11.21□□□□□ -0.61
RNF38-209ENST00000491349 EVA1CP58658 441 aa11.21□□□□□ -0.61
RNF38-209ENST00000491349 ZC3H6P61129 1189 aaKnown RBP11.21□□□□□ -0.61
RNF38-209ENST00000491349 SMG6Q86US8 1419 aaKnown RBP11.2□□□□□ -0.62
RNF38-209ENST00000491349 CPDO75976 1380 aa11.2□□□□□ -0.62
RNF38-209ENST00000491349 PER1O15534 1290 aaPredicted RBP11.2□□□□□ -0.62
RNF38-209ENST00000491349 ANP32CO43423 234 aa11.2□□□□□ -0.62
RNF38-209ENST00000491349 ZNF772Q68DY9 489 aaPredicted RBP11.2□□□□□ -0.62
RNF38-209ENST00000491349 MAP2P11137 1827 aaKnown RBP11.2□□□□□ -0.62
RNF38-209ENST00000491349 KIF24Q5T7B8 1368 aa11.19□□□□□ -0.62
RNF38-209ENST00000491349 KIAA0232Q92628 1395 aa11.19□□□□□ -0.62
RNF38-209ENST00000491349 NWD2Q9ULI1 1742 aa11.19□□□□□ -0.62
RNF38-209ENST00000491349 PPM1GO15355 546 aaPredicted RBP11.19□□□□□ -0.62
RNF38-209ENST00000491349 TNNT2P45379 298 aaPredicted RBP11.19□□□□□ -0.62
RNF38-209ENST00000491349 RALBP1Q15311 655 aa11.19□□□□□ -0.62
RNF38-209ENST00000491349 AMER1Q5JTC6 1135 aaPredicted RBP11.19□□□□□ -0.62
RNF38-209ENST00000491349 CFAP53Q96M91 514 aa11.19□□□□□ -0.62
RNF38-209ENST00000491349 ABCC6O95255 1503 aa11.19□□□□□ -0.62
RNF38-209ENST00000491349 RTL1A6NKG5 1358 aa11.18□□□□□ -0.62
RNF38-209ENST00000491349 CSB-PGBD3P0DP91 1061 aa11.18□□□□□ -0.62
RNF38-209ENST00000491349 ZRANB1Q9UGI0 708 aa11.18□□□□□ -0.62
RNF38-209ENST00000491349 USP21Q9UK80 565 aa11.18□□□□□ -0.62
RNF38-209ENST00000491349 CCDC9Q9Y3X0 531 aaKnown RBP11.18□□□□□ -0.62
RNF38-209ENST00000491349 PLCH1Q4KWH8 1693 aa11.17□□□□□ -0.62
RNF38-209ENST00000491349 AATKQ6ZMQ8 1374 aa11.17□□□□□ -0.62
RNF38-209ENST00000491349 ARHGEF25Q86VW2 580 aa11.17□□□□□ -0.62
RNF38-209ENST00000491349 BLMP54132 1417 aaPredicted RBP11.17□□□□□ -0.62
RNF38-209ENST00000491349 NFAT5O94916 1531 aa11.16□□□□□ -0.62
RNF38-209ENST00000491349 CHRNA2Q15822 529 aa11.16□□□□□ -0.62
RNF38-209ENST00000491349 BTG4Q9NY30 223 aa11.16□□□□□ -0.62
RNF38-209ENST00000491349 LRP6O75581 1613 aa11.16□□□□□ -0.62
RNF38-209ENST00000491349 FLT4P35916 1363 aa11.16□□□□□ -0.62
RNF38-209ENST00000491349 AFF2P51816 1311 aa11.15□□□□□ -0.62
RNF38-209ENST00000491349 FAM208AQ9UK61 1670 aaKnown RBP11.15□□□□□ -0.62
RNF38-209ENST00000491349 FAM83GA6ND36 823 aa11.15□□□□□ -0.62
RNF38-209ENST00000491349 RRS1Q15050 365 aaKnown RBP11.15□□□□□ -0.62
RNF38-209ENST00000491349 UNC5CLQ8IV45 518 aa11.15□□□□□ -0.62
RNF38-209ENST00000491349 IP6K1Q92551 441 aa11.15□□□□□ -0.62
RNF38-209ENST00000491349 STRN4Q9NRL3 753 aa11.15□□□□□ -0.62
RNF38-209ENST00000491349 TRPC5Q9UL62 973 aaPredicted RBP11.15□□□□□ -0.62
RNF38-209ENST00000491349 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.15□□□□□ -0.63
RNF38-209ENST00000491349 MAP3K19Q56UN5 1328 aa11.14□□□□□ -0.63
RNF38-209ENST00000491349 FNBP4Q8N3X1 1017 aaPredicted RBP11.14□□□□□ -0.63
RNF38-209ENST00000491349 FARP1Q9Y4F1 1045 aaPredicted RBP11.14□□□□□ -0.63
RNF38-209ENST00000491349 RGPD5Q99666 1765 aa11.13□□□□□ -0.63
RNF38-209ENST00000491349 HOXC9P31274 260 aa11.13□□□□□ -0.63
RNF38-209ENST00000491349 TOM1L2Q6ZVM7 507 aa11.13□□□□□ -0.63
RNF38-209ENST00000491349 NUDCQ9Y266 331 aa11.13□□□□□ -0.63
RNF38-209ENST00000491349 MYBBP1AQ9BQG0 1328 aaKnown RBP11.12□□□□□ -0.63
RNF38-209ENST00000491349 MTHFSP49914 203 aa11.12□□□□□ -0.63
RNF38-209ENST00000491349 LTV1Q96GA3 475 aaPredicted RBP11.12□□□□□ -0.63
RNF38-209ENST00000491349 QTRT2Q9H974 415 aaKnown RBP11.12□□□□□ -0.63
RNF38-209ENST00000491349 POLKQ9UBT6 870 aa11.12□□□□□ -0.63
RNF38-209ENST00000491349 SLIT2O94813 1529 aa11.12□□□□□ -0.63
RNF38-209ENST00000491349 INSRP06213 1382 aa11.12□□□□□ -0.63
RNF38-209ENST00000491349 CDK12Q9NYV4 1490 aaPredicted RBP11.12□□□□□ -0.63
RNF38-209ENST00000491349 LMO7Q8WWI1 1683 aa11.11□□□□□ -0.63
RNF38-209ENST00000491349 A0A0G2JS52 829 aa11.11□□□□□ -0.63
RNF38-209ENST00000491349 NEFMP07197 916 aa11.11□□□□□ -0.63
RNF38-209ENST00000491349 MYT1Q01538 1121 aa11.11□□□□□ -0.63
RNF38-209ENST00000491349 DIEXFQ68CQ4 756 aaKnown RBP11.11□□□□□ -0.63
RNF38-209ENST00000491349 ANKRD24Q8TF21 1146 aa11.11□□□□□ -0.63
RNF38-209ENST00000491349 NLRP2Q9NX02 1062 aa11.11□□□□□ -0.63
RNF38-209ENST00000491349 EMILIN1Q9Y6C2 1016 aa11.11□□□□□ -0.63
RNF38-209ENST00000491349 PARD3Q8TEW0 1356 aa11.11□□□□□ -0.63
RNF38-209ENST00000491349 COL18A1P39060 1754 aa11.11□□□□□ -0.63
RNF38-209ENST00000491349 WDR17Q8IZU2 1322 aa11.1□□□□□ -0.63
RNF38-209ENST00000491349 CRB1P82279 1406 aa11.1□□□□□ -0.63
RNF38-209ENST00000491349 NRAPQ86VF7 1730 aa11.1□□□□□ -0.63
RNF38-209ENST00000491349 DIAPH1O60610 1272 aaKnown RBP11.1□□□□□ -0.63
RNF38-209ENST00000491349 PPP2R1AP30153 589 aa11.1□□□□□ -0.63
RNF38-209ENST00000491349 VPS72Q15906 364 aa11.1□□□□□ -0.63
RNF38-209ENST00000491349 PRKRIP1Q9H875 184 aaPredicted RBP11.1□□□□□ -0.63
RNF38-209ENST00000491349 THRAP3Q9Y2W1 955 aaKnown RBP11.1□□□□□ -0.63
RNF38-209ENST00000491349 COL5A2P05997 1499 aaPredicted RBP11.1□□□□□ -0.63
RNF38-209ENST00000491349 CAMTA1Q9Y6Y1 1673 aa11.09□□□□□ -0.63
RNF38-209ENST00000491349 GABBR2O75899 941 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms