RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 CRB1P82279 1406 aa13.02□□□□□ -0.33
SUPT20H-220ENST00000490716 KIF24Q5T7B8 1368 aa13.01□□□□□ -0.33
SUPT20H-220ENST00000490716 RTL1A6NKG5 1358 aa13.01□□□□□ -0.33
SUPT20H-220ENST00000490716 CICQ96RK0 1608 aaPredicted RBP13.01□□□□□ -0.33
SUPT20H-220ENST00000490716 ADAMTS2O95450 1211 aa13.01□□□□□ -0.33
SUPT20H-220ENST00000490716 BARGINQ6ZT62 677 aa13.01□□□□□ -0.33
SUPT20H-220ENST00000490716 FYB1O15117 783 aa13□□□□□ -0.33
SUPT20H-220ENST00000490716 PER1O15534 1290 aaPredicted RBP13□□□□□ -0.33
SUPT20H-220ENST00000490716 COL3A1P02461 1466 aaPredicted RBP13□□□□□ -0.33
SUPT20H-220ENST00000490716 RXRBP28702 533 aa13□□□□□ -0.33
SUPT20H-220ENST00000490716 TMF1P82094 1093 aa13□□□□□ -0.33
SUPT20H-220ENST00000490716 ZNF831Q5JPB2 1677 aa13□□□□□ -0.33
SUPT20H-220ENST00000490716 NME9Q86XW9 330 aa12.99□□□□□ -0.33
SUPT20H-220ENST00000490716 ABTB2Q8N961 1025 aa12.99□□□□□ -0.33
SUPT20H-220ENST00000490716 NLRP13Q86W25 1043 aa12.99□□□□□ -0.33
SUPT20H-220ENST00000490716 CCER1Q8TC90 406 aaPredicted RBP12.99□□□□□ -0.33
SUPT20H-220ENST00000490716 NPC1L1Q9UHC9 1359 aa12.98□□□□□ -0.33
SUPT20H-220ENST00000490716 ITGB4P16144 1822 aa12.98□□□□□ -0.33
SUPT20H-220ENST00000490716 PLEKHG2Q9H7P9 1386 aa12.98□□□□□ -0.33
SUPT20H-220ENST00000490716 NSD3Q9BZ95 1437 aa12.97□□□□□ -0.33
SUPT20H-220ENST00000490716 KIF7Q2M1P5 1343 aa12.97□□□□□ -0.33
SUPT20H-220ENST00000490716 NGLY1Q96IV0 654 aa12.97□□□□□ -0.33
SUPT20H-220ENST00000490716 CASZ1Q86V15 1759 aa12.97□□□□□ -0.33
SUPT20H-220ENST00000490716 BTG4Q9NY30 223 aa12.97□□□□□ -0.33
SUPT20H-220ENST00000490716 DOT1LQ8TEK3 1739 aa12.96□□□□□ -0.33
SUPT20H-220ENST00000490716 UPF1Q92900 1129 aaKnown RBP eCLIP12.96□□□□□ -0.33
SUPT20H-220ENST00000490716 BTAF1O14981 1849 aa12.96□□□□□ -0.33
SUPT20H-220ENST00000490716 PHF23Q9BUL5 403 aaPredicted RBP12.96□□□□□ -0.33
SUPT20H-220ENST00000490716 TUBGCP6Q96RT7 1819 aa12.96□□□□□ -0.33
SUPT20H-220ENST00000490716 SIPA1L3O60292 1781 aaPredicted RBP12.96□□□□□ -0.34
SUPT20H-220ENST00000490716 INSRP06213 1382 aa12.95□□□□□ -0.34
SUPT20H-220ENST00000490716 EIF4G2P78344 907 aaKnown RBP eCLIP12.95□□□□□ -0.34
SUPT20H-220ENST00000490716 THRAP3Q9Y2W1 955 aaKnown RBP12.95□□□□□ -0.34
SUPT20H-220ENST00000490716 WDR17Q8IZU2 1322 aa12.95□□□□□ -0.34
SUPT20H-220ENST00000490716 NSD2O96028 1365 aa12.95□□□□□ -0.34
SUPT20H-220ENST00000490716 MEX3CQ5U5Q3 659 aaKnown RBP12.95□□□□□ -0.34
SUPT20H-220ENST00000490716 KCNH5Q8NCM2 988 aa12.95□□□□□ -0.34
SUPT20H-220ENST00000490716 WASHC2AQ641Q2 1341 aa12.95□□□□□ -0.34
SUPT20H-220ENST00000490716 CCDC7Q96M83 1385 aa12.94□□□□□ -0.34
SUPT20H-220ENST00000490716 TAF1LQ8IZX4 1826 aa12.94□□□□□ -0.34
SUPT20H-220ENST00000490716 TNS2Q63HR2 1409 aa12.94□□□□□ -0.34
SUPT20H-220ENST00000490716 TERF2IPQ9NYB0 399 aa12.94□□□□□ -0.34
SUPT20H-220ENST00000490716 ERBB3P21860 1342 aa12.94□□□□□ -0.34
SUPT20H-220ENST00000490716 NUTM2GQ5VZR2 741 aa12.93□□□□□ -0.34
SUPT20H-220ENST00000490716 AMER1Q5JTC6 1135 aaPredicted RBP12.93□□□□□ -0.34
SUPT20H-220ENST00000490716 NLRP6P59044 892 aa12.92□□□□□ -0.34
SUPT20H-220ENST00000490716 CDCA8Q53HL2 280 aa12.92□□□□□ -0.34
SUPT20H-220ENST00000490716 LARP1Q6PKG0 1096 aaKnown RBP12.92□□□□□ -0.34
SUPT20H-220ENST00000490716 SCN11AQ9UI33 1791 aa12.92□□□□□ -0.34
SUPT20H-220ENST00000490716 LRP5O75197 1615 aa12.91□□□□□ -0.34
SUPT20H-220ENST00000490716 CHRNA2Q15822 529 aa12.91□□□□□ -0.34
SUPT20H-220ENST00000490716 HDGFL2Q7Z4V5 671 aaPredicted RBP12.91□□□□□ -0.34
SUPT20H-220ENST00000490716 MEGF6O75095 1541 aa12.91□□□□□ -0.34
SUPT20H-220ENST00000490716 MAP3K19Q56UN5 1328 aa12.9□□□□□ -0.34
SUPT20H-220ENST00000490716 PAK3O75914 559 aaPredicted RBP12.9□□□□□ -0.34
SUPT20H-220ENST00000490716 IP6K1Q92551 441 aa12.9□□□□□ -0.34
SUPT20H-220ENST00000490716 OVOS2A0A0G2JMS6 1433 aa12.9□□□□□ -0.34
SUPT20H-220ENST00000490716 CARD10Q9BWT7 1032 aa12.9□□□□□ -0.34
SUPT20H-220ENST00000490716 ZC3H6P61129 1189 aaKnown RBP12.89□□□□□ -0.35
SUPT20H-220ENST00000490716 UBR2Q8IWV8 1755 aa12.88□□□□□ -0.35
SUPT20H-220ENST00000490716 HOXC9P31274 260 aa12.88□□□□□ -0.35
SUPT20H-220ENST00000490716 COL5A3P25940 1745 aaPredicted RBP12.88□□□□□ -0.35
SUPT20H-220ENST00000490716 SEPT12Q8IYM1 358 aa12.88□□□□□ -0.35
SUPT20H-220ENST00000490716 PRDM11Q9NQV5 511 aa12.88□□□□□ -0.35
SUPT20H-220ENST00000490716 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.86□□□□□ -0.359e-7■■□□□ 13.4
SUPT20H-220ENST00000490716 TCP11L2Q8N4U5 519 aa12.86□□□□□ -0.35
SUPT20H-220ENST00000490716 FBLN1P23142 703 aa12.85□□□□□ -0.35
SUPT20H-220ENST00000490716 FLT4P35916 1363 aa12.85□□□□□ -0.35
SUPT20H-220ENST00000490716 KDRP35968 1356 aa12.84□□□□□ -0.35
SUPT20H-220ENST00000490716 PANK3Q9H999 370 aa12.84□□□□□ -0.35
SUPT20H-220ENST00000490716 POLKQ9UBT6 870 aa12.84□□□□□ -0.35
SUPT20H-220ENST00000490716 C5P01031 1676 aa12.84□□□□□ -0.35
SUPT20H-220ENST00000490716 MRC1P22897 1456 aa12.83□□□□□ -0.35
SUPT20H-220ENST00000490716 CCDC125Q86Z20 511 aa12.83□□□□□ -0.36
SUPT20H-220ENST00000490716 TMC1Q8TDI8 760 aa12.83□□□□□ -0.36
SUPT20H-220ENST00000490716 CGNL1Q0VF96 1302 aa12.82□□□□□ -0.36
SUPT20H-220ENST00000490716 FAM98CQ17RN3 349 aaKnown RBP12.82□□□□□ -0.36
SUPT20H-220ENST00000490716 DLG5Q8TDM6 1919 aa12.82□□□□□ -0.36
SUPT20H-220ENST00000490716 GGNBP2Q9H3C7 697 aa12.82□□□□□ -0.36
SUPT20H-220ENST00000490716 LMOD2Q6P5Q4 547 aa12.81□□□□□ -0.36
SUPT20H-220ENST00000490716 KRT27Q7Z3Y8 459 aa12.81□□□□□ -0.36
SUPT20H-220ENST00000490716 TJP1Q07157 1748 aa12.81□□□□□ -0.36
SUPT20H-220ENST00000490716 COG3Q96JB2 828 aa12.81□□□□□ -0.36
SUPT20H-220ENST00000490716 MARCH10Q8NA82 808 aaPredicted RBP12.8□□□□□ -0.36
SUPT20H-220ENST00000490716 SRCAPQ6ZRS2 3230 aa12.8□□□□□ -0.36
SUPT20H-220ENST00000490716 UBR3Q6ZT12 1888 aa12.8□□□□□ -0.36
SUPT20H-220ENST00000490716 ANKRD24Q8TF21 1146 aa12.79□□□□□ -0.36
SUPT20H-220ENST00000490716 PARD3Q8TEW0 1356 aa12.79□□□□□ -0.36
SUPT20H-220ENST00000490716 CDCA7Q9BWT1 371 aaPredicted RBP12.79□□□□□ -0.36
SUPT20H-220ENST00000490716 IGSF1Q8N6C5 1336 aa12.79□□□□□ -0.36
SUPT20H-220ENST00000490716 NBPF6Q5VWK0 638 aa12.78□□□□□ -0.36
SUPT20H-220ENST00000490716 NBPF4Q96M43 638 aa12.78□□□□□ -0.36
SUPT20H-220ENST00000490716 CAMKK2Q96RR4 588 aa12.78□□□□□ -0.36
SUPT20H-220ENST00000490716 RRS1Q15050 365 aaKnown RBP12.77□□□□□ -0.36
SUPT20H-220ENST00000490716 EMILIN1Q9Y6C2 1016 aa12.77□□□□□ -0.36
SUPT20H-220ENST00000490716 HSP90AB2PQ58FF8 381 aa12.77□□□□□ -0.37
SUPT20H-220ENST00000490716 NKX1-1Q15270 411 aaPredicted RBP12.75□□□□□ -0.37
SUPT20H-220ENST00000490716 PTF1AQ7RTS3 328 aa12.75□□□□□ -0.37
SUPT20H-220ENST00000490716 STRN4Q9NRL3 753 aa12.75□□□□□ -0.37
SUPT20H-220ENST00000490716 IL13P35225 146 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms