RNA–Protein interactions for RNA: ENST00000490552.1

USP34-218, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 1,793 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-218ENST00000490552 IP6K1Q92551 441 aa12.44□□□□□ -0.42
USP34-218ENST00000490552 PLEKHF1Q96S99 279 aa12.44□□□□□ -0.42
USP34-218ENST00000490552 MED1Q15648 1581 aaPredicted RBP12.44□□□□□ -0.42
USP34-218ENST00000490552 TOM1O60784 492 aa12.43□□□□□ -0.42
USP34-218ENST00000490552 TCP11L2Q8N4U5 519 aa12.43□□□□□ -0.42
USP34-218ENST00000490552 NHSL1Q5SYE7 1610 aa12.43□□□□□ -0.42
USP34-218ENST00000490552 PEAK1Q9H792 1746 aa12.43□□□□□ -0.42
USP34-218ENST00000490552 ARHGEF25Q86VW2 580 aa12.43□□□□□ -0.42
USP34-218ENST00000490552 RSPH6AQ9H0K4 717 aa12.43□□□□□ -0.42
USP34-218ENST00000490552 ZNF521Q96K83 1311 aa12.42□□□□□ -0.42
USP34-218ENST00000490552 GOLGA2Q08379 1002 aa12.42□□□□□ -0.42
USP34-218ENST00000490552 ABCC6O95255 1503 aa12.42□□□□□ -0.42
USP34-218ENST00000490552 PRKAR2BP31323 418 aa12.41□□□□□ -0.42
USP34-218ENST00000490552 DDX17Q92841 729 aaKnown RBP12.41□□□□□ -0.42
USP34-218ENST00000490552 LRRC59Q96AG4 307 aaKnown RBP12.41□□□□□ -0.42
USP34-218ENST00000490552 SALL2Q9Y467 1007 aaPredicted RBP12.41□□□□□ -0.42
USP34-218ENST00000490552 LTN1O94822 1766 aa12.4□□□□□ -0.42
USP34-218ENST00000490552 CPDO75976 1380 aa12.4□□□□□ -0.42
USP34-218ENST00000490552 IGSF1Q8N6C5 1336 aa12.4□□□□□ -0.42
USP34-218ENST00000490552 AHDC1Q5TGY3 1603 aaPredicted RBP12.4□□□□□ -0.42
USP34-218ENST00000490552 WDR63Q8IWG1 891 aa12.4□□□□□ -0.42
USP34-218ENST00000490552 KDRP35968 1356 aa12.4□□□□□ -0.43
USP34-218ENST00000490552 RGPD1P0DJD0 1748 aa12.39□□□□□ -0.43
USP34-218ENST00000490552 LMOD3Q0VAK6 560 aa12.39□□□□□ -0.43
USP34-218ENST00000490552 WWC1Q8IX03 1113 aa12.39□□□□□ -0.43
USP34-218ENST00000490552 ROBO1Q9Y6N7 1651 aa12.38□□□□□ -0.43
USP34-218ENST00000490552 E9PSI1 815 aa12.38□□□□□ -0.43
USP34-218ENST00000490552 HMOX1P09601 288 aa12.38□□□□□ -0.43
USP34-218ENST00000490552 TMPOP42166 694 aaKnown RBP12.38□□□□□ -0.43
USP34-218ENST00000490552 SULT6B1Q6IMI4 303 aa12.38□□□□□ -0.43
USP34-218ENST00000490552 CALD1Q05682 793 aaKnown RBP12.38□□□□□ -0.43
USP34-218ENST00000490552 NFE2L2Q16236 605 aa12.37□□□□□ -0.43
USP34-218ENST00000490552 EYA1Q99502 592 aa12.37□□□□□ -0.43
USP34-218ENST00000490552 HAP1P54257 671 aaPredicted RBP12.36□□□□□ -0.43
USP34-218ENST00000490552 RIPK4P57078 832 aa12.36□□□□□ -0.43
USP34-218ENST00000490552 NEUROD2Q15784 382 aa12.36□□□□□ -0.43
USP34-218ENST00000490552 IL16Q14005 1332 aa12.36□□□□□ -0.43
USP34-218ENST00000490552 SLFN5Q08AF3 891 aa12.35□□□□□ -0.43
USP34-218ENST00000490552 CRYBG1Q9Y4K1 1723 aa12.35□□□□□ -0.43
USP34-218ENST00000490552 PLEKHG2Q9H7P9 1386 aa12.35□□□□□ -0.43
USP34-218ENST00000490552 ZC3H6P61129 1189 aaKnown RBP12.35□□□□□ -0.43
USP34-218ENST00000490552 TRMT2AQ8IZ69 625 aaKnown RBP12.35□□□□□ -0.43
USP34-218ENST00000490552 SENP3-EIF4A1A0A087X0R7 540 aa12.34□□□□□ -0.43
USP34-218ENST00000490552 ZBTB7CA1YPR0 619 aa12.34□□□□□ -0.43
USP34-218ENST00000490552 NEFLP07196 543 aa12.34□□□□□ -0.43
USP34-218ENST00000490552 GAS2L2Q8NHY3 880 aa12.34□□□□□ -0.43
USP34-218ENST00000490552 MYH16Q9H6N6 1097 aa12.34□□□□□ -0.43
USP34-218ENST00000490552 RRP7AQ9Y3A4 280 aaKnown RBP12.34□□□□□ -0.43
USP34-218ENST00000490552 ERBB3P21860 1342 aa12.34□□□□□ -0.43
USP34-218ENST00000490552 AEBP1Q8IUX7 1158 aa12.33□□□□□ -0.44
USP34-218ENST00000490552 ANKRD24Q8TF21 1146 aa12.33□□□□□ -0.44
USP34-218ENST00000490552 LTV1Q96GA3 475 aaPredicted RBP12.33□□□□□ -0.44
USP34-218ENST00000490552 CDCA7LQ96GN5 454 aa12.33□□□□□ -0.44
USP34-218ENST00000490552 PHACTR3Q96KR7 559 aa12.33□□□□□ -0.44
USP34-218ENST00000490552 KIAA0232Q92628 1395 aa12.33□□□□□ -0.44
USP34-218ENST00000490552 NCAPD2Q15021 1401 aa12.33□□□□□ -0.44
USP34-218ENST00000490552 UBAP1LF5GYI3 381 aa12.33□□□□□ -0.44
USP34-218ENST00000490552 DUSP27Q5VZP5 1158 aa12.33□□□□□ -0.44
USP34-218ENST00000490552 CABLES1Q8TDN4 633 aa12.33□□□□□ -0.44
USP34-218ENST00000490552 TRIM35Q9UPQ4 493 aa12.33□□□□□ -0.44
USP34-218ENST00000490552 HTATSF1O43719 755 aaKnown RBP12.32□□□□□ -0.44
USP34-218ENST00000490552 PRDM11Q9NQV5 511 aa12.32□□□□□ -0.44
USP34-218ENST00000490552 COL22A1Q8NFW1 1626 aaPredicted RBP12.31□□□□□ -0.44
USP34-218ENST00000490552 FAM208AQ9UK61 1670 aaKnown RBP12.31□□□□□ -0.44
USP34-218ENST00000490552 PLEKHG5O94827 1062 aa12.31□□□□□ -0.44
USP34-218ENST00000490552 NBPF6Q5VWK0 638 aa12.31□□□□□ -0.44
USP34-218ENST00000490552 CERKQ8TCT0 537 aa12.31□□□□□ -0.44
USP34-218ENST00000490552 NBPF4Q96M43 638 aa12.31□□□□□ -0.44
USP34-218ENST00000490552 AXIN2Q9Y2T1 843 aa12.31□□□□□ -0.44
USP34-218ENST00000490552 AMOTQ4VCS5 1084 aa12.3□□□□□ -0.44
USP34-218ENST00000490552 COL18A1P39060 1754 aa12.3□□□□□ -0.44
USP34-218ENST00000490552 CT47B1P0C2W7 299 aaPredicted RBP12.3□□□□□ -0.44
USP34-218ENST00000490552 RCAN3Q9UKA8 241 aa12.3□□□□□ -0.44
USP34-218ENST00000490552 SUPT16HQ9Y5B9 1047 aaKnown RBP12.3□□□□□ -0.44
USP34-218ENST00000490552 GTF3C3Q9Y5Q9 886 aa12.3□□□□□ -0.44
USP34-218ENST00000490552 CAMTA1Q9Y6Y1 1673 aa12.3□□□□□ -0.44
USP34-218ENST00000490552 PHLPP1O60346 1717 aa12.3□□□□□ -0.44
USP34-218ENST00000490552 ABCA3Q99758 1704 aa12.3□□□□□ -0.44
USP34-218ENST00000490552 CSB-PGBD3P0DP91 1061 aa12.29□□□□□ -0.44
USP34-218ENST00000490552 RTF1Q92541 710 aaKnown RBP12.29□□□□□ -0.44
USP34-218ENST00000490552 COL16A1Q07092 1604 aaPredicted RBP12.29□□□□□ -0.44
USP34-218ENST00000490552 GNAI1P63096 354 aa12.28□□□□□ -0.44
USP34-218ENST00000490552 PIP4K2BP78356 416 aa12.28□□□□□ -0.44
USP34-218ENST00000490552 MTHFSDQ2M296 383 aaKnown RBP12.28□□□□□ -0.44
USP34-218ENST00000490552 PLEKHO1Q53GL0 409 aaPredicted RBP12.28□□□□□ -0.44
USP34-218ENST00000490552 ERICH6BQ5W0A0 696 aa12.28□□□□□ -0.44
USP34-218ENST00000490552 IFT57Q9NWB7 429 aa12.28□□□□□ -0.44
USP34-218ENST00000490552 LMO7Q8WWI1 1683 aa12.28□□□□□ -0.44
USP34-218ENST00000490552 RNF123Q5XPI4 1314 aa12.27□□□□□ -0.45
USP34-218ENST00000490552 WDR17Q8IZU2 1322 aa12.27□□□□□ -0.45
USP34-218ENST00000490552 CHRNA2Q15822 529 aa12.27□□□□□ -0.45
USP34-218ENST00000490552 RAPGEF4Q8WZA2 1011 aa12.27□□□□□ -0.45
USP34-218ENST00000490552 NLRP2Q9NX02 1062 aa12.27□□□□□ -0.45
USP34-218ENST00000490552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.27□□□□□ -0.45
USP34-218ENST00000490552 GNAT3A8MTJ3 354 aa12.26□□□□□ -0.45
USP34-218ENST00000490552 CFAP44Q96MT7 982 aa12.26□□□□□ -0.45
USP34-218ENST00000490552 SPINK5Q9NQ38 1064 aaPredicted RBP12.26□□□□□ -0.45
USP34-218ENST00000490552 ZNF428Q96B54 188 aa12.25□□□□□ -0.45
USP34-218ENST00000490552 COL5A2P05997 1499 aaPredicted RBP12.25□□□□□ -0.45
USP34-218ENST00000490552 MAP3K5Q99683 1374 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms