RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 ARHGEF25Q86VW2 580 aa25.3■■□□□ 1.64
YIPF3-208ENST00000490447 CARD11Q9BXL7 1154 aa25.3■■□□□ 1.64
YIPF3-208ENST00000490447 AXIN2Q9Y2T1 843 aa25.3■■□□□ 1.64
YIPF3-208ENST00000490447 RREB1Q92766 1687 aa25.29■■□□□ 1.64
YIPF3-208ENST00000490447 AKAP12Q02952 1782 aa25.29■■□□□ 1.64
YIPF3-208ENST00000490447 CDCA7Q9BWT1 371 aaPredicted RBP25.29■■□□□ 1.64
YIPF3-208ENST00000490447 SBNO2Q9Y2G9 1366 aa25.28■■□□□ 1.64
YIPF3-208ENST00000490447 LRRC37A3O60309 1634 aa25.28■■□□□ 1.64
YIPF3-208ENST00000490447 COL18A1P39060 1754 aa25.26■■□□□ 1.63
YIPF3-208ENST00000490447 NUP188Q5SRE5 1749 aa25.26■■□□□ 1.63
YIPF3-208ENST00000490447 TONSLQ96HA7 1378 aa25.24■■□□□ 1.63
YIPF3-208ENST00000490447 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.24■■□□□ 1.63
YIPF3-208ENST00000490447 TMC1Q8TDI8 760 aa25.23■■□□□ 1.63
YIPF3-208ENST00000490447 CARD10Q9BWT7 1032 aa25.23■■□□□ 1.63
YIPF3-208ENST00000490447 PEAK1Q9H792 1746 aa25.22■■□□□ 1.63
YIPF3-208ENST00000490447 NFAT5O94916 1531 aa25.21■■□□□ 1.63
YIPF3-208ENST00000490447 HDGFL2Q7Z4V5 671 aaPredicted RBP25.21■■□□□ 1.63
YIPF3-208ENST00000490447 PLSCR1O15162 318 aa25.2■■□□□ 1.62
YIPF3-208ENST00000490447 BCL11BQ9C0K0 894 aaPredicted RBP25.2■■□□□ 1.62
YIPF3-208ENST00000490447 MON2Q7Z3U7 1717 aa25.2■■□□□ 1.62
YIPF3-208ENST00000490447 ABCC6O95255 1503 aa25.2■■□□□ 1.62
YIPF3-208ENST00000490447 WNK3Q9BYP7 1800 aa25.2■■□□□ 1.62
YIPF3-208ENST00000490447 CCDC7Q96M83 1385 aa25.19■■□□□ 1.62
YIPF3-208ENST00000490447 EXOC5O00471 708 aa25.18■■□□□ 1.62
YIPF3-208ENST00000490447 MARCH10Q8NA82 808 aaPredicted RBP25.18■■□□□ 1.62
YIPF3-208ENST00000490447 USP31Q70CQ4 1352 aa25.18■■□□□ 1.62
YIPF3-208ENST00000490447 NME9Q86XW9 330 aa25.16■■□□□ 1.62
YIPF3-208ENST00000490447 RGPD3A6NKT7 1758 aaPredicted RBP25.16■■□□□ 1.62
YIPF3-208ENST00000490447 RGPD4Q7Z3J3 1758 aa25.16■■□□□ 1.62
YIPF3-208ENST00000490447 RGPD5Q99666 1765 aa25.16■■□□□ 1.62
YIPF3-208ENST00000490447 BCL9O00512 1426 aa25.16■■□□□ 1.62
YIPF3-208ENST00000490447 TERF2IPQ9NYB0 399 aa25.15■■□□□ 1.62
YIPF3-208ENST00000490447 CD163L1Q9NR16 1453 aa25.15■■□□□ 1.62
YIPF3-208ENST00000490447 SPON1Q9HCB6 807 aa25.14■■□□□ 1.62
YIPF3-208ENST00000490447 PPP1R1BQ9UD71 204 aaPredicted RBP25.14■■□□□ 1.62
YIPF3-208ENST00000490447 SBF2Q86WG5 1849 aa25.14■■□□□ 1.61
YIPF3-208ENST00000490447 SLC12A5Q9H2X9 1139 aa25.13■■□□□ 1.61
YIPF3-208ENST00000490447 EDC4Q6P2E9 1401 aaKnown RBP25.13■■□□□ 1.61
YIPF3-208ENST00000490447 NLRP2Q9NX02 1062 aa25.12■■□□□ 1.61
YIPF3-208ENST00000490447 TNS2Q63HR2 1409 aa25.12■■□□□ 1.61
YIPF3-208ENST00000490447 ERBB3P21860 1342 aa25.12■■□□□ 1.61
YIPF3-208ENST00000490447 USP54Q70EL1 1684 aa25.12■■□□□ 1.61
YIPF3-208ENST00000490447 PTF1AQ7RTS3 328 aa25.12■■□□□ 1.61
YIPF3-208ENST00000490447 KCNQ2O43526 872 aa25.11■■□□□ 1.61
YIPF3-208ENST00000490447 A0A1W2PP64 1363 aa25.1■■□□□ 1.61
YIPF3-208ENST00000490447 PUS7Q96PZ0 661 aaKnown RBP25.1■■□□□ 1.61
YIPF3-208ENST00000490447 ANKRD24Q8TF21 1146 aa25.08■■□□□ 1.6
YIPF3-208ENST00000490447 ANO8Q9HCE9 1232 aaPredicted RBP25.08■■□□□ 1.6
YIPF3-208ENST00000490447 IL2RBP14784 551 aa25.07■■□□□ 1.6
YIPF3-208ENST00000490447 LTN1O94822 1766 aa25.06■■□□□ 1.6
YIPF3-208ENST00000490447 SLC24A1O60721 1099 aa25.06■■□□□ 1.6
YIPF3-208ENST00000490447 NINLQ9Y2I6 1382 aa25.06■■□□□ 1.6
YIPF3-208ENST00000490447 TXNRD1Q16881 649 aa25.05■■□□□ 1.6
YIPF3-208ENST00000490447 PROM2Q8N271 834 aa25.04■■□□□ 1.6
YIPF3-208ENST00000490447 STK32BQ9NY57 414 aa25.04■■□□□ 1.6
YIPF3-208ENST00000490447 ST20-MTHFSA0A0A6YYL1 179 aa25.03■■□□□ 1.6
YIPF3-208ENST00000490447 ACSBG1Q96GR2 724 aa25.03■■□□□ 1.6
YIPF3-208ENST00000490447 DCAF8L1A6NGE4 600 aa25.02■■□□□ 1.6
YIPF3-208ENST00000490447 COG3Q96JB2 828 aa25.01■■□□□ 1.59
YIPF3-208ENST00000490447 TESK2Q96S53 571 aa25■■□□□ 1.59
YIPF3-208ENST00000490447 NHSQ6T4R5 1651 aa24.99■■□□□ 1.59
YIPF3-208ENST00000490447 IP6K1Q92551 441 aa24.99■■□□□ 1.59
YIPF3-208ENST00000490447 SLC15A2Q16348 729 aa24.98■■□□□ 1.59
YIPF3-208ENST00000490447 CASZ1Q86V15 1759 aa24.97■■□□□ 1.59
YIPF3-208ENST00000490447 ZBTB7AO95365 584 aa24.97■■□□□ 1.59
YIPF3-208ENST00000490447 LTV1Q96GA3 475 aaPredicted RBP24.97■■□□□ 1.59
YIPF3-208ENST00000490447 PDGFDQ9GZP0 370 aaPredicted RBP24.96■■□□□ 1.59
YIPF3-208ENST00000490447 AMPHP49418 695 aa24.93■■□□□ 1.58
YIPF3-208ENST00000490447 ANKRD36BQ8N2N9 1353 aa24.93■■□□□ 1.58
YIPF3-208ENST00000490447 FAM208AQ9UK61 1670 aaKnown RBP24.93■■□□□ 1.58
YIPF3-208ENST00000490447 YY1P25490 414 aa24.92■■□□□ 1.58
YIPF3-208ENST00000490447 TMF1P82094 1093 aa24.92■■□□□ 1.58
YIPF3-208ENST00000490447 HOXC9P31274 260 aa24.91■■□□□ 1.58
YIPF3-208ENST00000490447 TRIM26Q12899 539 aaPredicted RBP24.91■■□□□ 1.58
YIPF3-208ENST00000490447 DDX54Q8TDD1 881 aaKnown RBP24.91■■□□□ 1.58
YIPF3-208ENST00000490447 ATF5Q9Y2D1 282 aaPredicted RBP24.91■■□□□ 1.58
YIPF3-208ENST00000490447 MAP3K19Q56UN5 1328 aa24.91■■□□□ 1.58
YIPF3-208ENST00000490447 MTFR1LQ9H019 292 aa24.89■■□□□ 1.58
YIPF3-208ENST00000490447 USP47Q96K76 1375 aa24.89■■□□□ 1.57
YIPF3-208ENST00000490447 PTGER2P43116 358 aa24.87■■□□□ 1.57
YIPF3-208ENST00000490447 RTL1A6NKG5 1358 aa24.87■■□□□ 1.57
YIPF3-208ENST00000490447 BTAF1O14981 1849 aa24.87■■□□□ 1.57
YIPF3-208ENST00000490447 FBLN1P23142 703 aa24.86■■□□□ 1.57
YIPF3-208ENST00000490447 CDCA8Q53HL2 280 aa24.86■■□□□ 1.57
YIPF3-208ENST00000490447 SYTL4Q96C24 671 aaPredicted RBP24.86■■□□□ 1.57
YIPF3-208ENST00000490447 MYOM1P52179 1685 aa24.85■■□□□ 1.57
YIPF3-208ENST00000490447 SMG6Q86US8 1419 aaKnown RBP24.84■■□□□ 1.57
YIPF3-208ENST00000490447 GGNBP2Q9H3C7 697 aa24.84■■□□□ 1.57
YIPF3-208ENST00000490447 PAPPAQ13219 1627 aa24.83■■□□□ 1.57
YIPF3-208ENST00000490447 RRS1Q15050 365 aaKnown RBP24.83■■□□□ 1.56
YIPF3-208ENST00000490447 FYB1O15117 783 aa24.82■■□□□ 1.56
YIPF3-208ENST00000490447 SLC27A3Q5K4L6 730 aa24.82■■□□□ 1.56
YIPF3-208ENST00000490447 ZCRB1Q8TBF4 217 aaKnown RBP24.82■■□□□ 1.56
YIPF3-208ENST00000490447 LRRC4BQ9NT99 713 aa24.82■■□□□ 1.56
YIPF3-208ENST00000490447 ZNF827Q17R98 1081 aa24.81■■□□□ 1.56
YIPF3-208ENST00000490447 FHDC1Q9C0D6 1143 aaPredicted RBP24.81■■□□□ 1.56
YIPF3-208ENST00000490447 KAT6BQ8WYB5 2073 aa24.8■■□□□ 1.56
YIPF3-208ENST00000490447 UTRNP46939 3433 aa24.8■■□□□ 1.56
YIPF3-208ENST00000490447 PRIM1P49642 420 aaKnown RBP24.79■■□□□ 1.56
YIPF3-208ENST00000490447 MEGF6O75095 1541 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms