RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 CABP1Q9NZU7 370 aa28.5■■■□□ 2.15
UPK3B-205ENST00000490360 CASZ1Q86V15 1759 aa28.49■■■□□ 2.15
UPK3B-205ENST00000490360 QRICH2Q9H0J4 1663 aa28.48■■■□□ 2.15
UPK3B-205ENST00000490360 COL18A1P39060 1754 aa28.47■■■□□ 2.15
UPK3B-205ENST00000490360 WNK3Q9BYP7 1800 aa28.47■■■□□ 2.15
UPK3B-205ENST00000490360 AKAP12Q02952 1782 aa28.47■■■□□ 2.15
UPK3B-205ENST00000490360 KCNH5Q8NCM2 988 aa28.46■■■□□ 2.15
UPK3B-205ENST00000490360 ANO8Q9HCE9 1232 aaPredicted RBP28.46■■■□□ 2.15
UPK3B-205ENST00000490360 MARCH10Q8NA82 808 aaPredicted RBP28.44■■■□□ 2.14
UPK3B-205ENST00000490360 ZNF692Q9BU19 519 aaPredicted RBP28.44■■■□□ 2.14
UPK3B-205ENST00000490360 PIK3C2AO00443 1686 aa28.43■■■□□ 2.14
UPK3B-205ENST00000490360 CARD10Q9BWT7 1032 aa28.43■■■□□ 2.14
UPK3B-205ENST00000490360 CPSF1Q10570 1443 aaKnown RBP28.43■■■□□ 2.14
UPK3B-205ENST00000490360 EVC2Q86UK5 1308 aa28.43■■■□□ 2.14
UPK3B-205ENST00000490360 ARHGEF25Q86VW2 580 aa28.42■■■□□ 2.14
UPK3B-205ENST00000490360 PROM2Q8N271 834 aa28.42■■■□□ 2.14
UPK3B-205ENST00000490360 AXIN2Q9Y2T1 843 aa28.42■■■□□ 2.14
UPK3B-205ENST00000490360 STK32BQ9NY57 414 aa28.41■■■□□ 2.14
UPK3B-205ENST00000490360 EXOC5O00471 708 aa28.39■■■□□ 2.14
UPK3B-205ENST00000490360 ZBTB7AO95365 584 aa28.38■■■□□ 2.13
UPK3B-205ENST00000490360 CSB-PGBD3P0DP91 1061 aa28.38■■■□□ 2.13
UPK3B-205ENST00000490360 TXNRD1Q16881 649 aa28.38■■■□□ 2.13
UPK3B-205ENST00000490360 PTF1AQ7RTS3 328 aa28.38■■■□□ 2.13
UPK3B-205ENST00000490360 TTC21AQ8NDW8 1320 aa28.38■■■□□ 2.13
UPK3B-205ENST00000490360 CCDC7Q96M83 1385 aa28.37■■■□□ 2.13
UPK3B-205ENST00000490360 PTGER2P43116 358 aa28.37■■■□□ 2.13
UPK3B-205ENST00000490360 SLC15A2Q16348 729 aa28.36■■■□□ 2.13
UPK3B-205ENST00000490360 TTC21BQ7Z4L5 1316 aa28.36■■■□□ 2.13
UPK3B-205ENST00000490360 TRPM1Q7Z4N2 1603 aa28.36■■■□□ 2.13
UPK3B-205ENST00000490360 ABCC6O95255 1503 aa28.35■■■□□ 2.13
UPK3B-205ENST00000490360 RGPD5Q99666 1765 aa28.34■■■□□ 2.13
UPK3B-205ENST00000490360 PDGFDQ9GZP0 370 aaPredicted RBP28.34■■■□□ 2.13
UPK3B-205ENST00000490360 MYOM1P52179 1685 aa28.34■■■□□ 2.13
UPK3B-205ENST00000490360 MTFR1LQ9H019 292 aa28.33■■■□□ 2.13
UPK3B-205ENST00000490360 ATF5Q9Y2D1 282 aaPredicted RBP28.32■■■□□ 2.12
UPK3B-205ENST00000490360 TNS2Q63HR2 1409 aa28.3■■■□□ 2.12
UPK3B-205ENST00000490360 SYT17Q9BSW7 474 aa28.3■■■□□ 2.12
UPK3B-205ENST00000490360 ZNF784Q8NCA9 323 aaPredicted RBP28.28■■■□□ 2.12
UPK3B-205ENST00000490360 FHDC1Q9C0D6 1143 aaPredicted RBP28.28■■■□□ 2.12
UPK3B-205ENST00000490360 NFAT5O94916 1531 aa28.28■■■□□ 2.12
UPK3B-205ENST00000490360 CHD4Q14839 1912 aa28.27■■■□□ 2.12
UPK3B-205ENST00000490360 NHSQ6T4R5 1651 aa28.26■■■□□ 2.12
UPK3B-205ENST00000490360 SOX12O15370 315 aa28.26■■■□□ 2.11
UPK3B-205ENST00000490360 KTN1Q86UP2 1357 aaKnown RBP28.24■■■□□ 2.11
UPK3B-205ENST00000490360 SGIP1Q9BQI5 828 aa28.24■■■□□ 2.11
UPK3B-205ENST00000490360 UTRNP46939 3433 aa28.24■■■□□ 2.11
UPK3B-205ENST00000490360 L3MBTL2Q969R5 705 aa28.23■■■□□ 2.11
UPK3B-205ENST00000490360 MAP3K5Q99683 1374 aa28.22■■■□□ 2.11
UPK3B-205ENST00000490360 ARXQ96QS3 562 aa28.2■■■□□ 2.1
UPK3B-205ENST00000490360 USP31Q70CQ4 1352 aa28.2■■■□□ 2.1
UPK3B-205ENST00000490360 ERBB3P21860 1342 aa28.19■■■□□ 2.1
UPK3B-205ENST00000490360 IL2RBP14784 551 aa28.19■■■□□ 2.1
UPK3B-205ENST00000490360 ROCK2O75116 1388 aaKnown RBP28.19■■■□□ 2.1
UPK3B-205ENST00000490360 NLRP2Q9NX02 1062 aa28.18■■■□□ 2.1
UPK3B-205ENST00000490360 MON2Q7Z3U7 1717 aa28.18■■■□□ 2.1
UPK3B-205ENST00000490360 USP54Q70EL1 1684 aa28.16■■■□□ 2.1
UPK3B-205ENST00000490360 PAPPAQ13219 1627 aa28.16■■■□□ 2.1
UPK3B-205ENST00000490360 KAT6BQ8WYB5 2073 aa28.15■■■□□ 2.1
UPK3B-205ENST00000490360 ACSBG1Q96GR2 724 aa28.15■■■□□ 2.1
UPK3B-205ENST00000490360 BTAF1O14981 1849 aa28.14■■■□□ 2.1
UPK3B-205ENST00000490360 SLC16A10Q8TF71 515 aa28.14■■■□□ 2.1
UPK3B-205ENST00000490360 SBNO2Q9Y2G9 1366 aa28.13■■■□□ 2.09
UPK3B-205ENST00000490360 LTN1O94822 1766 aa28.11■■■□□ 2.09
UPK3B-205ENST00000490360 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.11■■■□□ 2.09
UPK3B-205ENST00000490360 SLC27A3Q5K4L6 730 aa28.1■■■□□ 2.09
UPK3B-205ENST00000490360 ANKRD24Q8TF21 1146 aa28.09■■■□□ 2.09
UPK3B-205ENST00000490360 C1QTNF8P60827 252 aa28.08■■■□□ 2.09
UPK3B-205ENST00000490360 QSER1Q2KHR3 1735 aa28.07■■■□□ 2.08
UPK3B-205ENST00000490360 POLD1P28340 1107 aa28.07■■■□□ 2.08
UPK3B-205ENST00000490360 GPR162Q16538 588 aa28.07■■■□□ 2.08
UPK3B-205ENST00000490360 HDGFL2Q7Z4V5 671 aaPredicted RBP28.07■■■□□ 2.08
UPK3B-205ENST00000490360 ZNF827Q17R98 1081 aa28.06■■■□□ 2.08
UPK3B-205ENST00000490360 NME9Q86XW9 330 aa28.06■■■□□ 2.08
UPK3B-205ENST00000490360 LRRC4BQ9NT99 713 aa28.06■■■□□ 2.08
UPK3B-205ENST00000490360 SENP3-EIF4A1A0A087X0R7 540 aa28.05■■■□□ 2.08
UPK3B-205ENST00000490360 AKT1S1Q96B36 256 aa28.04■■■□□ 2.08
UPK3B-205ENST00000490360 EDC4Q6P2E9 1401 aaKnown RBP28.03■■■□□ 2.08
UPK3B-205ENST00000490360 CD163L1Q9NR16 1453 aa28.02■■■□□ 2.08
UPK3B-205ENST00000490360 TERF2IPQ9NYB0 399 aa28.02■■■□□ 2.08
UPK3B-205ENST00000490360 FAM208AQ9UK61 1670 aaKnown RBP28.02■■■□□ 2.08
UPK3B-205ENST00000490360 COL24A1Q17RW2 1714 aa28.01■■■□□ 2.07
UPK3B-205ENST00000490360 TMC1Q8TDI8 760 aa28.01■■■□□ 2.07
UPK3B-205ENST00000490360 SIN3AQ96ST3 1273 aa28■■■□□ 2.07
UPK3B-205ENST00000490360 IP6K1Q92551 441 aa27.99■■■□□ 2.07
UPK3B-205ENST00000490360 PUS7Q96PZ0 661 aaKnown RBP27.98■■■□□ 2.07
UPK3B-205ENST00000490360 TFCP2L1Q9NZI6 479 aa27.98■■■□□ 2.07
UPK3B-205ENST00000490360 NEUROD1Q13562 356 aa27.97■■■□□ 2.07
UPK3B-205ENST00000490360 DDX54Q8TDD1 881 aaKnown RBP27.97■■■□□ 2.07
UPK3B-205ENST00000490360 PNPLA7Q6ZV29 1317 aa27.96■■■□□ 2.07
UPK3B-205ENST00000490360 SLC12A5Q9H2X9 1139 aa27.95■■■□□ 2.06
UPK3B-205ENST00000490360 ANKRD36BQ8N2N9 1353 aa27.95■■■□□ 2.06
UPK3B-205ENST00000490360 GIGYF1O75420 1035 aaPredicted RBP27.94■■■□□ 2.06
UPK3B-205ENST00000490360 KLHL34Q8N239 644 aa27.94■■■□□ 2.06
UPK3B-205ENST00000490360 CARD11Q9BXL7 1154 aa27.94■■■□□ 2.06
UPK3B-205ENST00000490360 GOLGB1Q14789 3259 aaKnown RBP27.93■■■□□ 2.06
UPK3B-205ENST00000490360 HMGB2P26583 209 aaKnown RBP27.93■■■□□ 2.06
UPK3B-205ENST00000490360 SYTL4Q96C24 671 aaPredicted RBP27.92■■■□□ 2.06
UPK3B-205ENST00000490360 A0A1W2PP64 1363 aa27.91■■■□□ 2.06
UPK3B-205ENST00000490360 PRIM1P49642 420 aaKnown RBP27.91■■■□□ 2.06
UPK3B-205ENST00000490360 LY75O60449 1722 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms