RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 SMG6Q86US8 1419 aaKnown RBP23.83■■□□□ 1.4
ERCC3-207ENST00000490062 SOX12O15370 315 aa23.82■■□□□ 1.4
ERCC3-207ENST00000490062 POTEAQ6S8J7 498 aa23.82■■□□□ 1.4
ERCC3-207ENST00000490062 IP6K1Q92551 441 aa23.82■■□□□ 1.4
ERCC3-207ENST00000490062 AXIN2Q9Y2T1 843 aa23.82■■□□□ 1.4
ERCC3-207ENST00000490062 MORC1Q86VD1 984 aa23.8■■□□□ 1.4
ERCC3-207ENST00000490062 QTRT2Q9H974 415 aaKnown RBP23.8■■□□□ 1.4
ERCC3-207ENST00000490062 MAP2P11137 1827 aaKnown RBP23.8■■□□□ 1.4
ERCC3-207ENST00000490062 CDK12Q9NYV4 1490 aaPredicted RBP23.79■■□□□ 1.4
ERCC3-207ENST00000490062 FLT4P35916 1363 aa23.78■■□□□ 1.4
ERCC3-207ENST00000490062 RGPD5Q99666 1765 aa23.78■■□□□ 1.4
ERCC3-207ENST00000490062 FBLN1P23142 703 aa23.78■■□□□ 1.4
ERCC3-207ENST00000490062 HOXC9P31274 260 aa23.78■■□□□ 1.4
ERCC3-207ENST00000490062 DDX10Q13206 875 aaKnown RBP23.78■■□□□ 1.4
ERCC3-207ENST00000490062 POLKQ9UBT6 870 aa23.78■■□□□ 1.4
ERCC3-207ENST00000490062 PEAK1Q9H792 1746 aa23.78■■□□□ 1.4
ERCC3-207ENST00000490062 RBM6P78332 1123 aaKnown RBP23.77■■□□□ 1.4
ERCC3-207ENST00000490062 RRS1Q15050 365 aaKnown RBP23.77■■□□□ 1.4
ERCC3-207ENST00000490062 GJD4Q96KN9 370 aaPredicted RBP23.77■■□□□ 1.4
ERCC3-207ENST00000490062 ERBB3P21860 1342 aa23.77■■□□□ 1.4
ERCC3-207ENST00000490062 WDR17Q8IZU2 1322 aa23.77■■□□□ 1.4
ERCC3-207ENST00000490062 GLI3P10071 1580 aa23.77■■□□□ 1.4
ERCC3-207ENST00000490062 SPATA31A5Q5VU36 1347 aa23.76■■□□□ 1.39
ERCC3-207ENST00000490062 SPATA31A7Q8IWB4 1347 aa23.76■■□□□ 1.39
ERCC3-207ENST00000490062 INSRP06213 1382 aa23.76■■□□□ 1.39
ERCC3-207ENST00000490062 AMPHP49418 695 aa23.75■■□□□ 1.39
ERCC3-207ENST00000490062 FAM208AQ9UK61 1670 aaKnown RBP23.75■■□□□ 1.39
ERCC3-207ENST00000490062 CRB1P82279 1406 aa23.75■■□□□ 1.39
ERCC3-207ENST00000490062 CC2D1BQ5T0F9 858 aaKnown RBP23.74■■□□□ 1.39
ERCC3-207ENST00000490062 EMILIN1Q9Y6C2 1016 aa23.74■■□□□ 1.39
ERCC3-207ENST00000490062 ZBTB7CA1YPR0 619 aa23.73■■□□□ 1.39
ERCC3-207ENST00000490062 ONECUT3O60422 494 aaPredicted RBP23.73■■□□□ 1.39
ERCC3-207ENST00000490062 RXRBP28702 533 aa23.73■■□□□ 1.39
ERCC3-207ENST00000490062 EVA1CP58658 441 aa23.73■■□□□ 1.39
ERCC3-207ENST00000490062 SPATA31A1Q5TZJ5 1347 aa23.73■■□□□ 1.39
ERCC3-207ENST00000490062 LARP1Q6PKG0 1096 aaKnown RBP23.72■■□□□ 1.39
ERCC3-207ENST00000490062 PARD3Q8TEW0 1356 aa23.72■■□□□ 1.39
ERCC3-207ENST00000490062 STRN4Q9NRL3 753 aa23.71■■□□□ 1.39
ERCC3-207ENST00000490062 THRAP3Q9Y2W1 955 aaKnown RBP23.71■■□□□ 1.39
ERCC3-207ENST00000490062 ANKRD24Q8TF21 1146 aa23.7■■□□□ 1.38
ERCC3-207ENST00000490062 CARD10Q9BWT7 1032 aa23.7■■□□□ 1.38
ERCC3-207ENST00000490062 BARGINQ6ZT62 677 aa23.69■■□□□ 1.38
ERCC3-207ENST00000490062 TNNT2P45379 298 aaPredicted RBP23.68■■□□□ 1.38
ERCC3-207ENST00000490062 HSP90AB2PQ58FF8 381 aa23.68■■□□□ 1.38
ERCC3-207ENST00000490062 THSD7AQ9UPZ6 1657 aa23.67■■□□□ 1.38
ERCC3-207ENST00000490062 TCP11L2Q8N4U5 519 aa23.66■■□□□ 1.38
ERCC3-207ENST00000490062 NCAPD2Q15021 1401 aa23.66■■□□□ 1.38
ERCC3-207ENST00000490062 TOM1L2Q6ZVM7 507 aa23.65■■□□□ 1.38
ERCC3-207ENST00000490062 RGS12O14924 1447 aa23.65■■□□□ 1.38
ERCC3-207ENST00000490062 RALBP1Q15311 655 aa23.64■■□□□ 1.37
ERCC3-207ENST00000490062 CCDC9Q9Y3X0 531 aaKnown RBP23.64■■□□□ 1.37
ERCC3-207ENST00000490062 DISP2A7MBM2 1401 aa23.63■■□□□ 1.37
ERCC3-207ENST00000490062 CSB-PGBD3P0DP91 1061 aa23.63■■□□□ 1.37
ERCC3-207ENST00000490062 MTHFSP49914 203 aa23.63■■□□□ 1.37
ERCC3-207ENST00000490062 WNK3Q9BYP7 1800 aa23.63■■□□□ 1.37
ERCC3-207ENST00000490062 PPM1GO15355 546 aaPredicted RBP23.61■■□□□ 1.37
ERCC3-207ENST00000490062 PPP2R1AP30153 589 aa23.61■■□□□ 1.37
ERCC3-207ENST00000490062 CDCA7Q9BWT1 371 aaPredicted RBP23.61■■□□□ 1.37
ERCC3-207ENST00000490062 PARP4Q9UKK3 1724 aaKnown RBP23.6■■□□□ 1.37
ERCC3-207ENST00000490062 COL3A1P02461 1466 aaPredicted RBP23.6■■□□□ 1.37
ERCC3-207ENST00000490062 EIF4A2Q14240 407 aaKnown RBP23.59■■□□□ 1.37
ERCC3-207ENST00000490062 NLRP2Q9NX02 1062 aa23.59■■□□□ 1.37
ERCC3-207ENST00000490062 RGPD2P0DJD1 1756 aa23.58■■□□□ 1.37
ERCC3-207ENST00000490062 PLEKHG2Q9H7P9 1386 aa23.58■■□□□ 1.37
ERCC3-207ENST00000490062 FAM98CQ17RN3 349 aaKnown RBP23.58■■□□□ 1.37
ERCC3-207ENST00000490062 NBPF6Q5VWK0 638 aa23.58■■□□□ 1.37
ERCC3-207ENST00000490062 NBPF4Q96M43 638 aa23.58■■□□□ 1.37
ERCC3-207ENST00000490062 ILDR2Q71H61 639 aa23.57■■□□□ 1.36
ERCC3-207ENST00000490062 LTV1Q96GA3 475 aaPredicted RBP23.57■■□□□ 1.36
ERCC3-207ENST00000490062 PRKRIP1Q9H875 184 aaPredicted RBP23.57■■□□□ 1.36
ERCC3-207ENST00000490062 RGPD1P0DJD0 1748 aa23.56■■□□□ 1.36
ERCC3-207ENST00000490062 IL13P35225 146 aa23.56■■□□□ 1.36
ERCC3-207ENST00000490062 SEPT12Q8IYM1 358 aa23.56■■□□□ 1.36
ERCC3-207ENST00000490062 USP35Q9P2H5 1018 aa23.56■■□□□ 1.36
ERCC3-207ENST00000490062 IGSF1Q8N6C5 1336 aa23.56■■□□□ 1.36
ERCC3-207ENST00000490062 EYA1Q99502 592 aa23.54■■□□□ 1.36
ERCC3-207ENST00000490062 CNGB1Q14028 1251 aaPredicted RBP23.53■■□□□ 1.36
ERCC3-207ENST00000490062 BRWD3Q6RI45 1802 aa23.53■■□□□ 1.36
ERCC3-207ENST00000490062 MYBBP1AQ9BQG0 1328 aaKnown RBP23.53■■□□□ 1.36
ERCC3-207ENST00000490062 LRRC37A3O60309 1634 aa23.52■■□□□ 1.36
ERCC3-207ENST00000490062 IL2RBP14784 551 aa23.52■■□□□ 1.36
ERCC3-207ENST00000490062 KDRP35968 1356 aa23.52■■□□□ 1.36
ERCC3-207ENST00000490062 CFAP53Q96M91 514 aa23.51■■□□□ 1.35
ERCC3-207ENST00000490062 DIAPH1O60610 1272 aaKnown RBP23.5■■□□□ 1.35
ERCC3-207ENST00000490062 OVOS2A0A0G2JMS6 1433 aa23.5■■□□□ 1.35
ERCC3-207ENST00000490062 TNS2Q63HR2 1409 aa23.5■■□□□ 1.35
ERCC3-207ENST00000490062 MEGF6O75095 1541 aa23.49■■□□□ 1.35
ERCC3-207ENST00000490062 BCL9O00512 1426 aa23.46■■□□□ 1.35
ERCC3-207ENST00000490062 DDB1Q16531 1140 aa23.46■■□□□ 1.35
ERCC3-207ENST00000490062 KRT27Q7Z3Y8 459 aa23.46■■□□□ 1.35
ERCC3-207ENST00000490062 USHBP1Q8N6Y0 703 aa23.45■■□□□ 1.34
ERCC3-207ENST00000490062 RAPGEF4Q8WZA2 1011 aa23.45■■□□□ 1.34
ERCC3-207ENST00000490062 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.45■■□□□ 1.345e-6■■□□□ 12.3
ERCC3-207ENST00000490062 PKD1L3Q7Z443 1732 aa23.45■■□□□ 1.34
ERCC3-207ENST00000490062 EXOC5O00471 708 aa23.44■■□□□ 1.34
ERCC3-207ENST00000490062 A0A0G2JS52 829 aa23.43■■□□□ 1.34
ERCC3-207ENST00000490062 MYT1Q01538 1121 aa23.43■■□□□ 1.34
ERCC3-207ENST00000490062 TATP17735 454 aaPredicted RBP23.42■■□□□ 1.34
ERCC3-207ENST00000490062 NUDCQ9Y266 331 aa23.42■■□□□ 1.34
ERCC3-207ENST00000490062 SHANK3Q9BYB0 1731 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms