RNA–Protein interactions for RNA: ENST00000490061.3

RN7SL239P-201, Transcript of RNA, 7SL, cytoplasmic 239, pseudogene, humanhuman

BASIC

Gene RN7SL239P, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL239P-201ENST00000490061 TXNRD1Q16881 649 aa12.47□□□□□ -0.41
RN7SL239P-201ENST00000490061 SLC16A10Q8TF71 515 aa12.47□□□□□ -0.41
RN7SL239P-201ENST00000490061 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
RN7SL239P-201ENST00000490061 GRIN3BO60391 1043 aa12.46□□□□□ -0.41
RN7SL239P-201ENST00000490061 LRRC37A3O60309 1634 aa12.45□□□□□ -0.42
RN7SL239P-201ENST00000490061 PROM2Q8N271 834 aa12.45□□□□□ -0.42
RN7SL239P-201ENST00000490061 AKAP12Q02952 1782 aa12.44□□□□□ -0.42
RN7SL239P-201ENST00000490061 POLD1P28340 1107 aa12.44□□□□□ -0.42
RN7SL239P-201ENST00000490061 ACEP12821 1306 aa12.43□□□□□ -0.42
RN7SL239P-201ENST00000490061 HMGB2P26583 209 aaKnown RBP12.43□□□□□ -0.42
RN7SL239P-201ENST00000490061 TOM1L2Q6ZVM7 507 aa12.43□□□□□ -0.42
RN7SL239P-201ENST00000490061 WDR17Q8IZU2 1322 aa12.42□□□□□ -0.42
RN7SL239P-201ENST00000490061 EXOC5O00471 708 aa12.41□□□□□ -0.42
RN7SL239P-201ENST00000490061 NUTM2GQ5VZR2 741 aa12.41□□□□□ -0.42
RN7SL239P-201ENST00000490061 PDGFDQ9GZP0 370 aaPredicted RBP12.41□□□□□ -0.42
RN7SL239P-201ENST00000490061 TOPAZ1Q8N9V7 1692 aa12.41□□□□□ -0.42
RN7SL239P-201ENST00000490061 MARCH10Q8NA82 808 aaPredicted RBP12.4□□□□□ -0.42
RN7SL239P-201ENST00000490061 CDK19Q9BWU1 502 aa12.4□□□□□ -0.42
RN7SL239P-201ENST00000490061 GOLGB1Q14789 3259 aaKnown RBP12.4□□□□□ -0.43
RN7SL239P-201ENST00000490061 WNK3Q9BYP7 1800 aa12.39□□□□□ -0.43
RN7SL239P-201ENST00000490061 KCNH5Q8NCM2 988 aa12.39□□□□□ -0.43
RN7SL239P-201ENST00000490061 CARD10Q9BWT7 1032 aa12.39□□□□□ -0.43
RN7SL239P-201ENST00000490061 CCDC7Q96M83 1385 aa12.39□□□□□ -0.43
RN7SL239P-201ENST00000490061 HSPA6P17066 643 aa12.38□□□□□ -0.43
RN7SL239P-201ENST00000490061 ABCC6O95255 1503 aa12.37□□□□□ -0.43
RN7SL239P-201ENST00000490061 QSER1Q2KHR3 1735 aa12.37□□□□□ -0.43
RN7SL239P-201ENST00000490061 ARHGEF28Q8N1W1 1705 aaKnown RBP12.37□□□□□ -0.43
RN7SL239P-201ENST00000490061 SLC27A3Q5K4L6 730 aa12.37□□□□□ -0.43
RN7SL239P-201ENST00000490061 SLIT3O75094 1523 aa12.37□□□□□ -0.43
RN7SL239P-201ENST00000490061 GPBP1L1Q9HC44 474 aaPredicted RBP12.36□□□□□ -0.43
RN7SL239P-201ENST00000490061 SHANK3Q9BYB0 1731 aa12.36□□□□□ -0.43
RN7SL239P-201ENST00000490061 PAPPAQ13219 1627 aa12.36□□□□□ -0.43
RN7SL239P-201ENST00000490061 TNS2Q63HR2 1409 aa12.36□□□□□ -0.43
RN7SL239P-201ENST00000490061 NHSQ6T4R5 1651 aa12.35□□□□□ -0.43
RN7SL239P-201ENST00000490061 COL24A1Q17RW2 1714 aa12.35□□□□□ -0.43
RN7SL239P-201ENST00000490061 NLRP6P59044 892 aa12.35□□□□□ -0.43
RN7SL239P-201ENST00000490061 CSB-PGBD3P0DP91 1061 aa12.33□□□□□ -0.44
RN7SL239P-201ENST00000490061 DCAF11Q8TEB1 546 aa12.33□□□□□ -0.44
RN7SL239P-201ENST00000490061 CPSF1Q10570 1443 aaKnown RBP12.33□□□□□ -0.44
RN7SL239P-201ENST00000490061 PPIP5K1Q6PFW1 1433 aa12.33□□□□□ -0.44
RN7SL239P-201ENST00000490061 TRPM1Q7Z4N2 1603 aa12.33□□□□□ -0.44
RN7SL239P-201ENST00000490061 COL18A1P39060 1754 aa12.33□□□□□ -0.44
RN7SL239P-201ENST00000490061 USP6P35125 1406 aa12.32□□□□□ -0.44
RN7SL239P-201ENST00000490061 PTF1AQ7RTS3 328 aa12.32□□□□□ -0.44
RN7SL239P-201ENST00000490061 PELP1Q8IZL8 1130 aaKnown RBP12.32□□□□□ -0.44
RN7SL239P-201ENST00000490061 ZNF692Q9BU19 519 aaPredicted RBP12.32□□□□□ -0.44
RN7SL239P-201ENST00000490061 ATP10DQ9P241 1426 aa12.31□□□□□ -0.44
RN7SL239P-201ENST00000490061 SRPK2P78362 688 aaKnown RBP12.31□□□□□ -0.44
RN7SL239P-201ENST00000490061 ARHGEF25Q86VW2 580 aa12.31□□□□□ -0.44
RN7SL239P-201ENST00000490061 KAT6BQ8WYB5 2073 aa12.31□□□□□ -0.44
RN7SL239P-201ENST00000490061 ZBTB7CA1YPR0 619 aa12.3□□□□□ -0.44
RN7SL239P-201ENST00000490061 PPARGC1BQ86YN6 1023 aaKnown RBP12.3□□□□□ -0.44
RN7SL239P-201ENST00000490061 AKT1S1Q96B36 256 aa12.3□□□□□ -0.44
RN7SL239P-201ENST00000490061 KIAA1210Q9ULL0 1709 aa12.3□□□□□ -0.44
RN7SL239P-201ENST00000490061 APLP1P51693 650 aa12.29□□□□□ -0.44
RN7SL239P-201ENST00000490061 KLHL34Q8N239 644 aa12.29□□□□□ -0.44
RN7SL239P-201ENST00000490061 TFCP2L1Q9NZI6 479 aa12.29□□□□□ -0.44
RN7SL239P-201ENST00000490061 KDM2AQ9Y2K7 1162 aa12.29□□□□□ -0.44
RN7SL239P-201ENST00000490061 AXIN2Q9Y2T1 843 aa12.29□□□□□ -0.44
RN7SL239P-201ENST00000490061 TTC21AQ8NDW8 1320 aa12.29□□□□□ -0.44
RN7SL239P-201ENST00000490061 CD2APQ9Y5K6 639 aa12.28□□□□□ -0.44
RN7SL239P-201ENST00000490061 QRICH2Q9H0J4 1663 aa12.28□□□□□ -0.44
RN7SL239P-201ENST00000490061 BTAF1O14981 1849 aa12.27□□□□□ -0.44
RN7SL239P-201ENST00000490061 IL2RBP14784 551 aa12.27□□□□□ -0.45
RN7SL239P-201ENST00000490061 ZNF827Q17R98 1081 aa12.27□□□□□ -0.45
RN7SL239P-201ENST00000490061 ADCY9O60503 1353 aa12.27□□□□□ -0.45
RN7SL239P-201ENST00000490061 PNPLA7Q6ZV29 1317 aa12.26□□□□□ -0.45
RN7SL239P-201ENST00000490061 FLAD1Q8NFF5 587 aa12.25□□□□□ -0.45
RN7SL239P-201ENST00000490061 LRRC4BQ9NT99 713 aa12.25□□□□□ -0.45
RN7SL239P-201ENST00000490061 CENPJQ9HC77 1338 aaPredicted RBP12.25□□□□□ -0.45
RN7SL239P-201ENST00000490061 PIK3C2AO00443 1686 aa12.24□□□□□ -0.45
RN7SL239P-201ENST00000490061 YBX3P16989 372 aaKnown RBP eCLIP12.24□□□□□ -0.45
RN7SL239P-201ENST00000490061 ERBB3P21860 1342 aa12.24□□□□□ -0.45
RN7SL239P-201ENST00000490061 NLGN2Q8NFZ4 835 aa12.24□□□□□ -0.45
RN7SL239P-201ENST00000490061 ACSBG1Q96GR2 724 aa12.24□□□□□ -0.45
RN7SL239P-201ENST00000490061 CABP1Q9NZU7 370 aa12.24□□□□□ -0.45
RN7SL239P-201ENST00000490061 TTC21BQ7Z4L5 1316 aa12.22□□□□□ -0.45
RN7SL239P-201ENST00000490061 EVC2Q86UK5 1308 aa12.22□□□□□ -0.45
RN7SL239P-201ENST00000490061 RGPD5Q99666 1765 aa12.22□□□□□ -0.45
RN7SL239P-201ENST00000490061 CABP2Q9NPB3 220 aa12.21□□□□□ -0.45
RN7SL239P-201ENST00000490061 NLRP2Q9NX02 1062 aa12.21□□□□□ -0.45
RN7SL239P-201ENST00000490061 NFAT5O94916 1531 aa12.21□□□□□ -0.46
RN7SL239P-201ENST00000490061 TOMM70O94826 608 aa12.2□□□□□ -0.46
RN7SL239P-201ENST00000490061 ANKRD36BQ8N2N9 1353 aa12.19□□□□□ -0.46
RN7SL239P-201ENST00000490061 LY75O60449 1722 aa12.18□□□□□ -0.46
RN7SL239P-201ENST00000490061 KIF3CO14782 793 aa12.18□□□□□ -0.46
RN7SL239P-201ENST00000490061 NSD3Q9BZ95 1437 aa12.18□□□□□ -0.46
RN7SL239P-201ENST00000490061 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
RN7SL239P-201ENST00000490061 FAM208AQ9UK61 1670 aaKnown RBP12.17□□□□□ -0.46
RN7SL239P-201ENST00000490061 TUBGCP6Q96RT7 1819 aa12.17□□□□□ -0.46
RN7SL239P-201ENST00000490061 MSH5O43196 834 aa12.17□□□□□ -0.46
RN7SL239P-201ENST00000490061 PRELPP51888 382 aa12.17□□□□□ -0.46
RN7SL239P-201ENST00000490061 DNAJC5GQ8N7S2 189 aa12.17□□□□□ -0.46
RN7SL239P-201ENST00000490061 CCNL1Q9UK58 526 aaPredicted RBP12.17□□□□□ -0.46
RN7SL239P-201ENST00000490061 USP54Q70EL1 1684 aa12.16□□□□□ -0.46
RN7SL239P-201ENST00000490061 JMYQ8N9B5 988 aa12.16□□□□□ -0.46
RN7SL239P-201ENST00000490061 USP47Q96K76 1375 aa12.16□□□□□ -0.46
RN7SL239P-201ENST00000490061 CGNL1Q0VF96 1302 aa12.15□□□□□ -0.46
RN7SL239P-201ENST00000490061 COL23A1Q86Y22 540 aaPredicted RBP12.15□□□□□ -0.46
RN7SL239P-201ENST00000490061 ZNF526Q8TF50 670 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms