RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 SBF2Q86WG5 1849 aa32.17■■■□□ 2.74
HOXA9-205ENST00000489695 PIK3C2AO00443 1686 aa32.17■■■□□ 2.74
HOXA9-205ENST00000489695 BCL9O00512 1426 aa32.17■■■□□ 2.74
HOXA9-205ENST00000489695 PTF1AQ7RTS3 328 aa32.16■■■□□ 2.74
HOXA9-205ENST00000489695 ANO8Q9HCE9 1232 aaPredicted RBP32.16■■■□□ 2.74
HOXA9-205ENST00000489695 CDCA7Q9BWT1 371 aaPredicted RBP32.15■■■□□ 2.74
HOXA9-205ENST00000489695 ARHGEF25Q86VW2 580 aa32.14■■■□□ 2.74
HOXA9-205ENST00000489695 MARCH10Q8NA82 808 aaPredicted RBP32.14■■■□□ 2.74
HOXA9-205ENST00000489695 CPSF1Q10570 1443 aaKnown RBP32.13■■■□□ 2.73
HOXA9-205ENST00000489695 PROM2Q8N271 834 aa32.13■■■□□ 2.73
HOXA9-205ENST00000489695 EVC2Q86UK5 1308 aa32.12■■■□□ 2.73
HOXA9-205ENST00000489695 ZNF692Q9BU19 519 aaPredicted RBP32.1■■■□□ 2.73
HOXA9-205ENST00000489695 CASZ1Q86V15 1759 aa32.09■■■□□ 2.73
HOXA9-205ENST00000489695 TTC21BQ7Z4L5 1316 aa32.09■■■□□ 2.73
HOXA9-205ENST00000489695 DCAF8L1A6NGE4 600 aa32.09■■■□□ 2.73
HOXA9-205ENST00000489695 KCNH5Q8NCM2 988 aa32.09■■■□□ 2.73
HOXA9-205ENST00000489695 CARD10Q9BWT7 1032 aa32.09■■■□□ 2.73
HOXA9-205ENST00000489695 WNK3Q9BYP7 1800 aa32.09■■■□□ 2.73
HOXA9-205ENST00000489695 PDGFDQ9GZP0 370 aaPredicted RBP32.07■■■□□ 2.72
HOXA9-205ENST00000489695 L3MBTL2Q969R5 705 aa32.06■■■□□ 2.72
HOXA9-205ENST00000489695 TRPM1Q7Z4N2 1603 aa32.04■■■□□ 2.72
HOXA9-205ENST00000489695 TTC21AQ8NDW8 1320 aa32.04■■■□□ 2.72
HOXA9-205ENST00000489695 AKAP12Q02952 1782 aa32.02■■■□□ 2.72
HOXA9-205ENST00000489695 EXOC5O00471 708 aa32.01■■■□□ 2.71
HOXA9-205ENST00000489695 CSB-PGBD3P0DP91 1061 aa32.01■■■□□ 2.71
HOXA9-205ENST00000489695 UTRNP46939 3433 aa32.01■■■□□ 2.71
HOXA9-205ENST00000489695 PTGER2P43116 358 aa32■■■□□ 2.71
HOXA9-205ENST00000489695 TXNRD1Q16881 649 aa32■■■□□ 2.71
HOXA9-205ENST00000489695 NFAT5O94916 1531 aa32■■■□□ 2.71
HOXA9-205ENST00000489695 SOX12O15370 315 aa31.99■■■□□ 2.71
HOXA9-205ENST00000489695 ZBTB7AO95365 584 aa31.99■■■□□ 2.71
HOXA9-205ENST00000489695 RGPD5Q99666 1765 aa31.99■■■□□ 2.71
HOXA9-205ENST00000489695 CCDC7Q96M83 1385 aa31.98■■■□□ 2.71
HOXA9-205ENST00000489695 ABCC6O95255 1503 aa31.97■■■□□ 2.71
HOXA9-205ENST00000489695 SLC15A2Q16348 729 aa31.96■■■□□ 2.71
HOXA9-205ENST00000489695 STK32BQ9NY57 414 aa31.96■■■□□ 2.71
HOXA9-205ENST00000489695 ROCK2O75116 1388 aaKnown RBP31.94■■■□□ 2.7
HOXA9-205ENST00000489695 KTN1Q86UP2 1357 aaKnown RBP31.94■■■□□ 2.7
HOXA9-205ENST00000489695 TNS2Q63HR2 1409 aa31.93■■■□□ 2.7
HOXA9-205ENST00000489695 ATF5Q9Y2D1 282 aaPredicted RBP31.93■■■□□ 2.7
HOXA9-205ENST00000489695 MYOM1P52179 1685 aa31.92■■■□□ 2.7
HOXA9-205ENST00000489695 USP31Q70CQ4 1352 aa31.89■■■□□ 2.7
HOXA9-205ENST00000489695 SGIP1Q9BQI5 828 aa31.88■■■□□ 2.69
HOXA9-205ENST00000489695 MTFR1LQ9H019 292 aa31.88■■■□□ 2.69
HOXA9-205ENST00000489695 ERBB3P21860 1342 aa31.87■■■□□ 2.69
HOXA9-205ENST00000489695 SIN3AQ96ST3 1273 aa31.87■■■□□ 2.69
HOXA9-205ENST00000489695 NHSQ6T4R5 1651 aa31.86■■■□□ 2.69
HOXA9-205ENST00000489695 SYT17Q9BSW7 474 aa31.86■■■□□ 2.69
HOXA9-205ENST00000489695 FHDC1Q9C0D6 1143 aaPredicted RBP31.86■■■□□ 2.69
HOXA9-205ENST00000489695 MON2Q7Z3U7 1717 aa31.85■■■□□ 2.69
HOXA9-205ENST00000489695 SBNO2Q9Y2G9 1366 aa31.83■■■□□ 2.69
HOXA9-205ENST00000489695 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.83■■■□□ 2.69
HOXA9-205ENST00000489695 USP54Q70EL1 1684 aa31.83■■■□□ 2.69
HOXA9-205ENST00000489695 ACSBG1Q96GR2 724 aa31.82■■■□□ 2.68
HOXA9-205ENST00000489695 NLRP2Q9NX02 1062 aa31.82■■■□□ 2.68
HOXA9-205ENST00000489695 CD163L1Q9NR16 1453 aa31.8■■■□□ 2.68
HOXA9-205ENST00000489695 IL2RBP14784 551 aa31.8■■■□□ 2.68
HOXA9-205ENST00000489695 PAPPAQ13219 1627 aa31.79■■■□□ 2.68
HOXA9-205ENST00000489695 NME9Q86XW9 330 aa31.79■■■□□ 2.68
HOXA9-205ENST00000489695 ZNF784Q8NCA9 323 aaPredicted RBP31.79■■■□□ 2.68
HOXA9-205ENST00000489695 NEUROD1Q13562 356 aa31.77■■■□□ 2.68
HOXA9-205ENST00000489695 ANKRD24Q8TF21 1146 aa31.75■■■□□ 2.67
HOXA9-205ENST00000489695 MAP3K5Q99683 1374 aa31.74■■■□□ 2.67
HOXA9-205ENST00000489695 ARXQ96QS3 562 aa31.74■■■□□ 2.67
HOXA9-205ENST00000489695 LTN1O94822 1766 aa31.72■■■□□ 2.67
HOXA9-205ENST00000489695 LRRC4BQ9NT99 713 aa31.72■■■□□ 2.67
HOXA9-205ENST00000489695 BTAF1O14981 1849 aa31.72■■■□□ 2.67
HOXA9-205ENST00000489695 ZNF827Q17R98 1081 aa31.71■■■□□ 2.67
HOXA9-205ENST00000489695 EDC4Q6P2E9 1401 aaKnown RBP31.7■■■□□ 2.67
HOXA9-205ENST00000489695 HDGFL2Q7Z4V5 671 aaPredicted RBP31.7■■■□□ 2.67
HOXA9-205ENST00000489695 TMC1Q8TDI8 760 aa31.7■■■□□ 2.67
HOXA9-205ENST00000489695 SLC12A5Q9H2X9 1139 aa31.7■■■□□ 2.67
HOXA9-205ENST00000489695 AKT1S1Q96B36 256 aa31.66■■■□□ 2.66
HOXA9-205ENST00000489695 CARD11Q9BXL7 1154 aa31.66■■■□□ 2.66
HOXA9-205ENST00000489695 IP6K1Q92551 441 aa31.65■■■□□ 2.66
HOXA9-205ENST00000489695 TERF2IPQ9NYB0 399 aa31.65■■■□□ 2.66
HOXA9-205ENST00000489695 SLC27A3Q5K4L6 730 aa31.64■■■□□ 2.66
HOXA9-205ENST00000489695 PUS7Q96PZ0 661 aaKnown RBP31.64■■■□□ 2.66
HOXA9-205ENST00000489695 GOLGB1Q14789 3259 aaKnown RBP31.64■■■□□ 2.66
HOXA9-205ENST00000489695 A0A1W2PP64 1363 aa31.64■■■□□ 2.66
HOXA9-205ENST00000489695 SLC16A10Q8TF71 515 aa31.63■■■□□ 2.65
HOXA9-205ENST00000489695 CHD4Q14839 1912 aa31.61■■■□□ 2.65
HOXA9-205ENST00000489695 DDX54Q8TDD1 881 aaKnown RBP31.61■■■□□ 2.65
HOXA9-205ENST00000489695 QSER1Q2KHR3 1735 aa31.57■■■□□ 2.64
HOXA9-205ENST00000489695 PNPLA7Q6ZV29 1317 aa31.56■■■□□ 2.64
HOXA9-205ENST00000489695 FAM208AQ9UK61 1670 aaKnown RBP31.56■■■□□ 2.64
HOXA9-205ENST00000489695 COL24A1Q17RW2 1714 aa31.55■■■□□ 2.64
HOXA9-205ENST00000489695 KAT6BQ8WYB5 2073 aa31.54■■■□□ 2.64
HOXA9-205ENST00000489695 GPR162Q16538 588 aa31.54■■■□□ 2.64
HOXA9-205ENST00000489695 LTV1Q96GA3 475 aaPredicted RBP31.54■■■□□ 2.64
HOXA9-205ENST00000489695 ANKRD36BQ8N2N9 1353 aa31.54■■■□□ 2.64
HOXA9-205ENST00000489695 POLD1P28340 1107 aa31.53■■■□□ 2.64
HOXA9-205ENST00000489695 PRIM1P49642 420 aaKnown RBP31.53■■■□□ 2.64
HOXA9-205ENST00000489695 C1QTNF8P60827 252 aa31.53■■■□□ 2.64
HOXA9-205ENST00000489695 TFCP2L1Q9NZI6 479 aa31.52■■■□□ 2.64
HOXA9-205ENST00000489695 NSD2O96028 1365 aa31.51■■■□□ 2.63
HOXA9-205ENST00000489695 MAP3K19Q56UN5 1328 aa31.5■■■□□ 2.63
HOXA9-205ENST00000489695 HOXC9P31274 260 aa31.5■■■□□ 2.63
HOXA9-205ENST00000489695 KCNQ4P56696 695 aa31.5■■■□□ 2.63
HOXA9-205ENST00000489695 SYTL4Q96C24 671 aaPredicted RBP31.5■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms