RNA–Protein interactions for RNA: ENST00000489519.1

CACFD1-205, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 795 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-205ENST00000489519 SOX12O15370 315 aa28.43■■■□□ 2.14
CACFD1-205ENST00000489519 TMC1Q8TDI8 760 aa28.43■■■□□ 2.14
CACFD1-205ENST00000489519 MON2Q7Z3U7 1717 aa28.43■■■□□ 2.14
CACFD1-205ENST00000489519 HDGFL2Q7Z4V5 671 aaPredicted RBP28.42■■■□□ 2.14
CACFD1-205ENST00000489519 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.41■■■□□ 2.14
CACFD1-205ENST00000489519 CDCA7Q9BWT1 371 aaPredicted RBP28.41■■■□□ 2.14
CACFD1-205ENST00000489519 USP31Q70CQ4 1352 aa28.4■■■□□ 2.14
CACFD1-205ENST00000489519 SLC24A1O60721 1099 aa28.4■■■□□ 2.14
CACFD1-205ENST00000489519 DDB1Q16531 1140 aa28.4■■■□□ 2.14
CACFD1-205ENST00000489519 SLC12A5Q9H2X9 1139 aa28.4■■■□□ 2.14
CACFD1-205ENST00000489519 TERF2IPQ9NYB0 399 aa28.39■■■□□ 2.14
CACFD1-205ENST00000489519 CSB-PGBD3P0DP91 1061 aa28.38■■■□□ 2.13
CACFD1-205ENST00000489519 R3HDM1Q15032 1099 aaKnown RBP28.38■■■□□ 2.13
CACFD1-205ENST00000489519 CARD10Q9BWT7 1032 aa28.38■■■□□ 2.13
CACFD1-205ENST00000489519 CD163L1Q9NR16 1453 aa28.38■■■□□ 2.13
CACFD1-205ENST00000489519 NFAT5O94916 1531 aa28.38■■■□□ 2.13
CACFD1-205ENST00000489519 LRP5O75197 1615 aa28.37■■■□□ 2.13
CACFD1-205ENST00000489519 OVOS2A0A0G2JMS6 1433 aa28.36■■■□□ 2.13
CACFD1-205ENST00000489519 OVOS2A0A0J9YW53 1432 aa28.36■■■□□ 2.13
CACFD1-205ENST00000489519 OVOS2Q6IE36 1432 aa28.36■■■□□ 2.13
CACFD1-205ENST00000489519 RGPD5Q99666 1765 aa28.36■■■□□ 2.13
CACFD1-205ENST00000489519 NME9Q86XW9 330 aa28.35■■■□□ 2.13
CACFD1-205ENST00000489519 ABCC6O95255 1503 aa28.34■■■□□ 2.13
CACFD1-205ENST00000489519 EDC4Q6P2E9 1401 aaKnown RBP28.34■■■□□ 2.13
CACFD1-205ENST00000489519 ST20-MTHFSA0A0A6YYL1 179 aa28.33■■■□□ 2.13
CACFD1-205ENST00000489519 TESK2Q96S53 571 aa28.32■■■□□ 2.12
CACFD1-205ENST00000489519 LRRC37A3O60309 1634 aa28.32■■■□□ 2.12
CACFD1-205ENST00000489519 USP54Q70EL1 1684 aa28.32■■■□□ 2.12
CACFD1-205ENST00000489519 PEAK1Q9H792 1746 aa28.31■■■□□ 2.12
CACFD1-205ENST00000489519 CCDC7Q96M83 1385 aa28.3■■■□□ 2.12
CACFD1-205ENST00000489519 NINLQ9Y2I6 1382 aa28.3■■■□□ 2.12
CACFD1-205ENST00000489519 NBPF14Q5TI25 921 aa28.3■■■□□ 2.12
CACFD1-205ENST00000489519 A0A1W2PP64 1363 aa28.29■■■□□ 2.12
CACFD1-205ENST00000489519 WNK3Q9BYP7 1800 aa28.29■■■□□ 2.12
CACFD1-205ENST00000489519 RREB1Q92766 1687 aa28.27■■■□□ 2.12
CACFD1-205ENST00000489519 EXOC5O00471 708 aa28.27■■■□□ 2.12
CACFD1-205ENST00000489519 MARCH10Q8NA82 808 aaPredicted RBP28.27■■■□□ 2.12
CACFD1-205ENST00000489519 BCL11BQ9C0K0 894 aaPredicted RBP28.27■■■□□ 2.12
CACFD1-205ENST00000489519 SBF2Q86WG5 1849 aa28.27■■■□□ 2.12
CACFD1-205ENST00000489519 BCL9O00512 1426 aa28.26■■■□□ 2.12
CACFD1-205ENST00000489519 PLSCR1O15162 318 aa28.26■■■□□ 2.11
CACFD1-205ENST00000489519 ERBB3P21860 1342 aa28.24■■■□□ 2.11
CACFD1-205ENST00000489519 NLRP2Q9NX02 1062 aa28.23■■■□□ 2.11
CACFD1-205ENST00000489519 NUP188Q5SRE5 1749 aa28.23■■■□□ 2.11
CACFD1-205ENST00000489519 LTN1O94822 1766 aa28.22■■■□□ 2.11
CACFD1-205ENST00000489519 RGPD3A6NKT7 1758 aaPredicted RBP28.19■■■□□ 2.1
CACFD1-205ENST00000489519 RGPD4Q7Z3J3 1758 aa28.19■■■□□ 2.1
CACFD1-205ENST00000489519 TMF1P82094 1093 aa28.19■■■□□ 2.1
CACFD1-205ENST00000489519 ANKRD24Q8TF21 1146 aa28.19■■■□□ 2.1
CACFD1-205ENST00000489519 COG3Q96JB2 828 aa28.18■■■□□ 2.1
CACFD1-205ENST00000489519 IL2RBP14784 551 aa28.17■■■□□ 2.1
CACFD1-205ENST00000489519 PTF1AQ7RTS3 328 aa28.17■■■□□ 2.1
CACFD1-205ENST00000489519 IP6K1Q92551 441 aa28.17■■■□□ 2.1
CACFD1-205ENST00000489519 TNS2Q63HR2 1409 aa28.17■■■□□ 2.1
CACFD1-205ENST00000489519 USP47Q96K76 1375 aa28.16■■■□□ 2.1
CACFD1-205ENST00000489519 TIMELESSQ9UNS1 1208 aa28.15■■■□□ 2.1
CACFD1-205ENST00000489519 ANKRD36BQ8N2N9 1353 aa28.14■■■□□ 2.1
CACFD1-205ENST00000489519 CDCA8Q53HL2 280 aa28.13■■■□□ 2.09
CACFD1-205ENST00000489519 PROM2Q8N271 834 aa28.1■■■□□ 2.09
CACFD1-205ENST00000489519 AMPHP49418 695 aa28.08■■■□□ 2.09
CACFD1-205ENST00000489519 SPON1Q9HCB6 807 aa28.08■■■□□ 2.09
CACFD1-205ENST00000489519 MAP3K19Q56UN5 1328 aa28.08■■■□□ 2.09
CACFD1-205ENST00000489519 CLSPNQ9HAW4 1339 aa28.08■■■□□ 2.09
CACFD1-205ENST00000489519 KCNQ2O43526 872 aa28.06■■■□□ 2.08
CACFD1-205ENST00000489519 TXNRD1Q16881 649 aa28.06■■■□□ 2.08
CACFD1-205ENST00000489519 LTV1Q96GA3 475 aaPredicted RBP28.06■■■□□ 2.08
CACFD1-205ENST00000489519 FYB1O15117 783 aa28.05■■■□□ 2.08
CACFD1-205ENST00000489519 HOXC9P31274 260 aa28.05■■■□□ 2.08
CACFD1-205ENST00000489519 FAM208AQ9UK61 1670 aaKnown RBP28.05■■■□□ 2.08
CACFD1-205ENST00000489519 ANO8Q9HCE9 1232 aaPredicted RBP28.04■■■□□ 2.08
CACFD1-205ENST00000489519 ACSBG1Q96GR2 724 aa28.03■■■□□ 2.08
CACFD1-205ENST00000489519 FBLN1P23142 703 aa28.02■■■□□ 2.08
CACFD1-205ENST00000489519 PCGF6Q9BYE7 350 aa28.02■■■□□ 2.08
CACFD1-205ENST00000489519 NHSQ6T4R5 1651 aa28.02■■■□□ 2.08
CACFD1-205ENST00000489519 KAT6BQ8WYB5 2073 aa28.02■■■□□ 2.08
CACFD1-205ENST00000489519 GGNBP2Q9H3C7 697 aa28.01■■■□□ 2.07
CACFD1-205ENST00000489519 PPP1R1BQ9UD71 204 aaPredicted RBP28■■■□□ 2.07
CACFD1-205ENST00000489519 RTL1A6NKG5 1358 aa27.99■■■□□ 2.07
CACFD1-205ENST00000489519 STK32BQ9NY57 414 aa27.99■■■□□ 2.07
CACFD1-205ENST00000489519 DDX54Q8TDD1 881 aaKnown RBP27.98■■■□□ 2.07
CACFD1-205ENST00000489519 RRS1Q15050 365 aaKnown RBP27.96■■■□□ 2.07
CACFD1-205ENST00000489519 SLC15A2Q16348 729 aa27.96■■■□□ 2.07
CACFD1-205ENST00000489519 CASZ1Q86V15 1759 aa27.93■■■□□ 2.06
CACFD1-205ENST00000489519 BTAF1O14981 1849 aa27.92■■■□□ 2.06
CACFD1-205ENST00000489519 ZCRB1Q8TBF4 217 aaKnown RBP27.92■■■□□ 2.06
CACFD1-205ENST00000489519 CARD14Q9BXL6 1004 aa27.91■■■□□ 2.06
CACFD1-205ENST00000489519 PDGFDQ9GZP0 370 aaPredicted RBP27.91■■■□□ 2.06
CACFD1-205ENST00000489519 SMG6Q86US8 1419 aaKnown RBP27.91■■■□□ 2.06
CACFD1-205ENST00000489519 KIF20BQ96Q89 1820 aa27.9■■■□□ 2.06
CACFD1-205ENST00000489519 KIF24Q5T7B8 1368 aa27.9■■■□□ 2.06
CACFD1-205ENST00000489519 NBPF6Q5VWK0 638 aa27.9■■■□□ 2.06
CACFD1-205ENST00000489519 NBPF4Q96M43 638 aa27.9■■■□□ 2.06
CACFD1-205ENST00000489519 RGPD2P0DJD1 1756 aa27.9■■■□□ 2.06
CACFD1-205ENST00000489519 CGNL1Q0VF96 1302 aa27.9■■■□□ 2.06
CACFD1-205ENST00000489519 INSRP06213 1382 aa27.88■■■□□ 2.05
CACFD1-205ENST00000489519 ZBTB7AO95365 584 aa27.88■■■□□ 2.05
CACFD1-205ENST00000489519 HSP90AB2PQ58FF8 381 aa27.87■■■□□ 2.05
CACFD1-205ENST00000489519 RAPGEF4Q8WZA2 1011 aa27.87■■■□□ 2.05
CACFD1-205ENST00000489519 FLT4P35916 1363 aa27.86■■■□□ 2.05
CACFD1-205ENST00000489519 NSD3Q9BZ95 1437 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms