RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 BARGINQ6ZT62 677 aa19.7■□□□□ 0.74
VTI1A-206ENST00000489142 KCNH5Q8NCM2 988 aa19.7■□□□□ 0.74
VTI1A-206ENST00000489142 CCER1Q8TC90 406 aaPredicted RBP19.7■□□□□ 0.74
VTI1A-206ENST00000489142 TERF2IPQ9NYB0 399 aa19.7■□□□□ 0.74
VTI1A-206ENST00000489142 PARP4Q9UKK3 1724 aaKnown RBP19.7■□□□□ 0.74
VTI1A-206ENST00000489142 TOM1L2Q6ZVM7 507 aa19.69■□□□□ 0.74
VTI1A-206ENST00000489142 USP31Q70CQ4 1352 aa19.69■□□□□ 0.74
VTI1A-206ENST00000489142 PUS7Q96PZ0 661 aaKnown RBP19.68■□□□□ 0.74
VTI1A-206ENST00000489142 LRRC37A3O60309 1634 aa19.67■□□□□ 0.74
VTI1A-206ENST00000489142 TMF1P82094 1093 aa19.67■□□□□ 0.74
VTI1A-206ENST00000489142 WDR17Q8IZU2 1322 aa19.66■□□□□ 0.74
VTI1A-206ENST00000489142 NINLQ9Y2I6 1382 aa19.66■□□□□ 0.74
VTI1A-206ENST00000489142 CSB-PGBD3P0DP91 1061 aa19.65■□□□□ 0.74
VTI1A-206ENST00000489142 PDE3BQ13370 1112 aa19.65■□□□□ 0.74
VTI1A-206ENST00000489142 TIMELESSQ9UNS1 1208 aa19.65■□□□□ 0.74
VTI1A-206ENST00000489142 THRAP3Q9Y2W1 955 aaKnown RBP19.65■□□□□ 0.74
VTI1A-206ENST00000489142 OVOS2A0A0J9YW53 1432 aa19.65■□□□□ 0.74
VTI1A-206ENST00000489142 OVOS2Q6IE36 1432 aa19.65■□□□□ 0.74
VTI1A-206ENST00000489142 MYOM1P52179 1685 aa19.65■□□□□ 0.74
VTI1A-206ENST00000489142 TRIM37O94972 964 aa19.64■□□□□ 0.73
VTI1A-206ENST00000489142 ANKRD36BQ8N2N9 1353 aa19.63■□□□□ 0.73
VTI1A-206ENST00000489142 BAG6P46379 1132 aa19.63■□□□□ 0.73
VTI1A-206ENST00000489142 ABCC6O95255 1503 aa19.62■□□□□ 0.73
VTI1A-206ENST00000489142 EN1Q05925 392 aaPredicted RBP19.62■□□□□ 0.73
VTI1A-206ENST00000489142 FAM196AQ6ZSG2 479 aa19.62■□□□□ 0.73
VTI1A-206ENST00000489142 SLC24A1O60721 1099 aa19.61■□□□□ 0.73
VTI1A-206ENST00000489142 KIF20BQ96Q89 1820 aa19.6■□□□□ 0.73
VTI1A-206ENST00000489142 PEAK1Q9H792 1746 aa19.6■□□□□ 0.73
VTI1A-206ENST00000489142 FBLN1P23142 703 aa19.59■□□□□ 0.73
VTI1A-206ENST00000489142 SBF2Q86WG5 1849 aa19.58■□□□□ 0.73
VTI1A-206ENST00000489142 CARD10Q9BWT7 1032 aa19.58■□□□□ 0.72
VTI1A-206ENST00000489142 DDB1Q16531 1140 aa19.57■□□□□ 0.72
VTI1A-206ENST00000489142 COG3Q96JB2 828 aa19.57■□□□□ 0.72
VTI1A-206ENST00000489142 ERBB3P21860 1342 aa19.56■□□□□ 0.72
VTI1A-206ENST00000489142 EZH2Q15910 746 aaKnown RBP19.56■□□□□ 0.72
VTI1A-206ENST00000489142 ANKRD24Q8TF21 1146 aa19.56■□□□□ 0.72
VTI1A-206ENST00000489142 POLR3GLQ9BT43 218 aa19.56■□□□□ 0.72
VTI1A-206ENST00000489142 NLRP2Q9NX02 1062 aa19.56■□□□□ 0.72
VTI1A-206ENST00000489142 DISP2A7MBM2 1401 aa19.56■□□□□ 0.72
VTI1A-206ENST00000489142 OVOS2A0A0G2JMS6 1433 aa19.55■□□□□ 0.72
VTI1A-206ENST00000489142 APBA3O96018 575 aa19.55■□□□□ 0.72
VTI1A-206ENST00000489142 CDCA8Q53HL2 280 aa19.55■□□□□ 0.72
VTI1A-206ENST00000489142 LTV1Q96GA3 475 aaPredicted RBP19.55■□□□□ 0.72
VTI1A-206ENST00000489142 GGNBP2Q9H3C7 697 aa19.55■□□□□ 0.72
VTI1A-206ENST00000489142 RGPD2P0DJD1 1756 aa19.55■□□□□ 0.72
VTI1A-206ENST00000489142 SRCAPQ6ZRS2 3230 aa19.54■□□□□ 0.72
VTI1A-206ENST00000489142 PSDA5PKW4 1024 aaPredicted RBP19.54■□□□□ 0.72
VTI1A-206ENST00000489142 FYB1O15117 783 aa19.53■□□□□ 0.72
VTI1A-206ENST00000489142 MARCH10Q8NA82 808 aaPredicted RBP19.53■□□□□ 0.72
VTI1A-206ENST00000489142 CCDC7Q96M83 1385 aa19.53■□□□□ 0.72
VTI1A-206ENST00000489142 RREB1Q92766 1687 aa19.52■□□□□ 0.72
VTI1A-206ENST00000489142 MAP3K19Q56UN5 1328 aa19.52■□□□□ 0.72
VTI1A-206ENST00000489142 NSD3Q9BZ95 1437 aa19.51■□□□□ 0.71
VTI1A-206ENST00000489142 NUP188Q5SRE5 1749 aa19.51■□□□□ 0.71
VTI1A-206ENST00000489142 HSPA5P11021 654 aaKnown RBP19.51■□□□□ 0.71
VTI1A-206ENST00000489142 RRS1Q15050 365 aaKnown RBP19.51■□□□□ 0.71
VTI1A-206ENST00000489142 IP6K1Q92551 441 aa19.51■□□□□ 0.71
VTI1A-206ENST00000489142 CAMKK2Q96RR4 588 aa19.51■□□□□ 0.71
VTI1A-206ENST00000489142 CDCA7Q9BWT1 371 aaPredicted RBP19.51■□□□□ 0.71
VTI1A-206ENST00000489142 CARD14Q9BXL6 1004 aa19.51■□□□□ 0.71
VTI1A-206ENST00000489142 FAM208AQ9UK61 1670 aaKnown RBP19.51■□□□□ 0.71
VTI1A-206ENST00000489142 PTF1AQ7RTS3 328 aa19.5■□□□□ 0.71
VTI1A-206ENST00000489142 TNS2Q63HR2 1409 aa19.5■□□□□ 0.71
VTI1A-206ENST00000489142 HOXC9P31274 260 aa19.49■□□□□ 0.71
VTI1A-206ENST00000489142 AMPHP49418 695 aa19.49■□□□□ 0.71
VTI1A-206ENST00000489142 EIF4G2P78344 907 aaKnown RBP eCLIP19.49■□□□□ 0.71
VTI1A-206ENST00000489142 EXOC5O00471 708 aa19.48■□□□□ 0.71
VTI1A-206ENST00000489142 R3HDM1Q15032 1099 aaKnown RBP19.47■□□□□ 0.71
VTI1A-206ENST00000489142 IL2RBP14784 551 aa19.46■□□□□ 0.71
VTI1A-206ENST00000489142 PARD3Q8TEW0 1356 aa19.44■□□□□ 0.7
VTI1A-206ENST00000489142 RGPD3A6NKT7 1758 aaPredicted RBP19.43■□□□□ 0.7
VTI1A-206ENST00000489142 RGPD4Q7Z3J3 1758 aa19.43■□□□□ 0.7
VTI1A-206ENST00000489142 C11orf95C9JLR9 678 aaPredicted RBP19.43■□□□□ 0.7
VTI1A-206ENST00000489142 KAT6BQ8WYB5 2073 aa19.43■□□□□ 0.7
VTI1A-206ENST00000489142 RTL1A6NKG5 1358 aa19.43■□□□□ 0.7
VTI1A-206ENST00000489142 NHSQ6T4R5 1651 aa19.43■□□□□ 0.7
VTI1A-206ENST00000489142 ACSBG1Q96GR2 724 aa19.42■□□□□ 0.7
VTI1A-206ENST00000489142 BCL11BQ9C0K0 894 aaPredicted RBP19.42■□□□□ 0.7
VTI1A-206ENST00000489142 KCNQ2O43526 872 aa19.41■□□□□ 0.7
VTI1A-206ENST00000489142 USHBP1Q8N6Y0 703 aa19.41■□□□□ 0.7
VTI1A-206ENST00000489142 SHANK3Q9BYB0 1731 aa19.41■□□□□ 0.7
VTI1A-206ENST00000489142 ANKRD26Q9UPS8 1709 aa19.41■□□□□ 0.7
VTI1A-206ENST00000489142 BCL9O00512 1426 aa19.41■□□□□ 0.7
VTI1A-206ENST00000489142 LRP5O75197 1615 aa19.4■□□□□ 0.7
VTI1A-206ENST00000489142 MAP2P11137 1827 aaKnown RBP19.4■□□□□ 0.7
VTI1A-206ENST00000489142 HSP90AB2PQ58FF8 381 aa19.4■□□□□ 0.7
VTI1A-206ENST00000489142 EMILIN1Q9Y6C2 1016 aa19.4■□□□□ 0.7
VTI1A-206ENST00000489142 MEGF6O75095 1541 aa19.4■□□□□ 0.7
VTI1A-206ENST00000489142 BTAF1O14981 1849 aa19.38■□□□□ 0.69
VTI1A-206ENST00000489142 PPM1GO15355 546 aaPredicted RBP19.38■□□□□ 0.69
VTI1A-206ENST00000489142 CGNL1Q0VF96 1302 aa19.38■□□□□ 0.69
VTI1A-206ENST00000489142 NBPF6Q5VWK0 638 aa19.38■□□□□ 0.69
VTI1A-206ENST00000489142 DDX54Q8TDD1 881 aaKnown RBP19.38■□□□□ 0.69
VTI1A-206ENST00000489142 NBPF4Q96M43 638 aa19.38■□□□□ 0.69
VTI1A-206ENST00000489142 SMG6Q86US8 1419 aaKnown RBP19.37■□□□□ 0.69
VTI1A-206ENST00000489142 FLT4P35916 1363 aa19.37■□□□□ 0.69
VTI1A-206ENST00000489142 TNNT2P45379 298 aaPredicted RBP19.36■□□□□ 0.69
VTI1A-206ENST00000489142 PANK3Q9H999 370 aa19.36■□□□□ 0.69
VTI1A-206ENST00000489142 DOT1LQ8TEK3 1739 aa19.36■□□□□ 0.69
VTI1A-206ENST00000489142 INSRP06213 1382 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms