RNA–Protein interactions for RNA: ENST00000489113.2

GAPDHP47-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 47, humanhuman

BASIC

Gene GAPDHP47, Length 999 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP47-201ENST00000489113 PARD3Q8TEW0 1356 aa12.36□□□□□ -0.43
GAPDHP47-201ENST00000489113 EP400Q96L91 3159 aa12.36□□□□□ -0.43
GAPDHP47-201ENST00000489113 NME9Q86XW9 330 aa12.36□□□□□ -0.43
GAPDHP47-201ENST00000489113 NRAPQ86VF7 1730 aa12.36□□□□□ -0.43
GAPDHP47-201ENST00000489113 SBNO2Q9Y2G9 1366 aa12.35□□□□□ -0.43
GAPDHP47-201ENST00000489113 ST20-MTHFSA0A0A6YYL1 179 aa12.35□□□□□ -0.43
GAPDHP47-201ENST00000489113 TOPAZ1Q8N9V7 1692 aa12.35□□□□□ -0.43
GAPDHP47-201ENST00000489113 QRICH2Q9H0J4 1663 aa12.35□□□□□ -0.43
GAPDHP47-201ENST00000489113 NRKQ7Z2Y5 1582 aa12.35□□□□□ -0.43
GAPDHP47-201ENST00000489113 PUS7Q96PZ0 661 aaKnown RBP12.34□□□□□ -0.43
GAPDHP47-201ENST00000489113 CPSF1Q10570 1443 aaKnown RBP12.34□□□□□ -0.43
GAPDHP47-201ENST00000489113 BCL11BQ9C0K0 894 aaPredicted RBP12.33□□□□□ -0.44
GAPDHP47-201ENST00000489113 OVOS2A0A0G2JMS6 1433 aa12.33□□□□□ -0.44
GAPDHP47-201ENST00000489113 OVOS2A0A0J9YW53 1432 aa12.33□□□□□ -0.44
GAPDHP47-201ENST00000489113 DISP2A7MBM2 1401 aa12.33□□□□□ -0.44
GAPDHP47-201ENST00000489113 OVOS2Q6IE36 1432 aa12.33□□□□□ -0.44
GAPDHP47-201ENST00000489113 TRPM1Q7Z4N2 1603 aa12.33□□□□□ -0.44
GAPDHP47-201ENST00000489113 PHRF1Q9P1Y6 1649 aaKnown RBP12.33□□□□□ -0.44
GAPDHP47-201ENST00000489113 BRWD3Q6RI45 1802 aa12.32□□□□□ -0.44
GAPDHP47-201ENST00000489113 TMF1P82094 1093 aa12.32□□□□□ -0.44
GAPDHP47-201ENST00000489113 MARCH10Q8NA82 808 aaPredicted RBP12.32□□□□□ -0.44
GAPDHP47-201ENST00000489113 COG3Q96JB2 828 aa12.32□□□□□ -0.44
GAPDHP47-201ENST00000489113 PPP1R1BQ9UD71 204 aaPredicted RBP12.32□□□□□ -0.44
GAPDHP47-201ENST00000489113 CCDC7Q96M83 1385 aa12.31□□□□□ -0.44
GAPDHP47-201ENST00000489113 ANKRD24Q8TF21 1146 aa12.31□□□□□ -0.44
GAPDHP47-201ENST00000489113 LTV1Q96GA3 475 aaPredicted RBP12.31□□□□□ -0.44
GAPDHP47-201ENST00000489113 PCGF6Q9BYE7 350 aa12.31□□□□□ -0.44
GAPDHP47-201ENST00000489113 THSD7AQ9UPZ6 1657 aa12.31□□□□□ -0.44
GAPDHP47-201ENST00000489113 SLIT3O75094 1523 aa12.31□□□□□ -0.44
GAPDHP47-201ENST00000489113 PLSCR1O15162 318 aa12.3□□□□□ -0.44
GAPDHP47-201ENST00000489113 NPM3O75607 178 aaKnown RBP12.3□□□□□ -0.44
GAPDHP47-201ENST00000489113 IL2RBP14784 551 aa12.3□□□□□ -0.44
GAPDHP47-201ENST00000489113 HOXD11P31277 338 aaPredicted RBP12.3□□□□□ -0.44
GAPDHP47-201ENST00000489113 AMPHP49418 695 aa12.3□□□□□ -0.44
GAPDHP47-201ENST00000489113 CDCA8Q53HL2 280 aa12.3□□□□□ -0.44
GAPDHP47-201ENST00000489113 CRYBG1Q9Y4K1 1723 aa12.3□□□□□ -0.44
GAPDHP47-201ENST00000489113 USP31Q70CQ4 1352 aa12.3□□□□□ -0.44
GAPDHP47-201ENST00000489113 SRCAPQ6ZRS2 3230 aa12.3□□□□□ -0.44
GAPDHP47-201ENST00000489113 EDC4Q6P2E9 1401 aaKnown RBP12.29□□□□□ -0.44
GAPDHP47-201ENST00000489113 DCAF8L1A6NGE4 600 aa12.29□□□□□ -0.44
GAPDHP47-201ENST00000489113 RNF216Q9NWF9 866 aaPredicted RBP12.29□□□□□ -0.44
GAPDHP47-201ENST00000489113 NINLQ9Y2I6 1382 aa12.29□□□□□ -0.44
GAPDHP47-201ENST00000489113 TESK2Q96S53 571 aa12.28□□□□□ -0.44
GAPDHP47-201ENST00000489113 SPON1Q9HCB6 807 aa12.28□□□□□ -0.44
GAPDHP47-201ENST00000489113 ERBB3P21860 1342 aa12.28□□□□□ -0.44
GAPDHP47-201ENST00000489113 A0A1W2PP64 1363 aa12.28□□□□□ -0.44
GAPDHP47-201ENST00000489113 LMO7Q8WWI1 1683 aa12.27□□□□□ -0.45
GAPDHP47-201ENST00000489113 DDX54Q8TDD1 881 aaKnown RBP12.27□□□□□ -0.45
GAPDHP47-201ENST00000489113 IP6K1Q92551 441 aa12.27□□□□□ -0.45
GAPDHP47-201ENST00000489113 ACSBG1Q96GR2 724 aa12.27□□□□□ -0.45
GAPDHP47-201ENST00000489113 STK32BQ9NY57 414 aa12.27□□□□□ -0.45
GAPDHP47-201ENST00000489113 PTF1AQ7RTS3 328 aa12.26□□□□□ -0.45
GAPDHP47-201ENST00000489113 RGPD1P0DJD0 1748 aa12.25□□□□□ -0.45
GAPDHP47-201ENST00000489113 KCNQ2O43526 872 aa12.25□□□□□ -0.45
GAPDHP47-201ENST00000489113 TXNRD1Q16881 649 aa12.25□□□□□ -0.45
GAPDHP47-201ENST00000489113 PIK3C2AO00443 1686 aa12.24□□□□□ -0.45
GAPDHP47-201ENST00000489113 USP47Q96K76 1375 aa12.24□□□□□ -0.45
GAPDHP47-201ENST00000489113 POLR3GLQ9BT43 218 aa12.24□□□□□ -0.45
GAPDHP47-201ENST00000489113 TIMELESSQ9UNS1 1208 aa12.24□□□□□ -0.45
GAPDHP47-201ENST00000489113 CD163L1Q9NR16 1453 aa12.23□□□□□ -0.45
GAPDHP47-201ENST00000489113 SYTL4Q96C24 671 aaPredicted RBP12.23□□□□□ -0.45
GAPDHP47-201ENST00000489113 GGNBP2Q9H3C7 697 aa12.23□□□□□ -0.45
GAPDHP47-201ENST00000489113 MAP3K19Q56UN5 1328 aa12.22□□□□□ -0.45
GAPDHP47-201ENST00000489113 FBLN1P23142 703 aa12.22□□□□□ -0.45
GAPDHP47-201ENST00000489113 HOXC9P31274 260 aa12.22□□□□□ -0.45
GAPDHP47-201ENST00000489113 PROM2Q8N271 834 aa12.22□□□□□ -0.45
GAPDHP47-201ENST00000489113 NFAT5O94916 1531 aa12.21□□□□□ -0.45
GAPDHP47-201ENST00000489113 BCL9O00512 1426 aa12.21□□□□□ -0.45
GAPDHP47-201ENST00000489113 ANKRD36BQ8N2N9 1353 aa12.21□□□□□ -0.45
GAPDHP47-201ENST00000489113 FYB1O15117 783 aa12.21□□□□□ -0.45
GAPDHP47-201ENST00000489113 ZBTB7AO95365 584 aa12.21□□□□□ -0.45
GAPDHP47-201ENST00000489113 RRS1Q15050 365 aaKnown RBP12.21□□□□□ -0.45
GAPDHP47-201ENST00000489113 SLC15A2Q16348 729 aa12.2□□□□□ -0.46
GAPDHP47-201ENST00000489113 ZCRB1Q8TBF4 217 aaKnown RBP12.2□□□□□ -0.46
GAPDHP47-201ENST00000489113 RAPGEF4Q8WZA2 1011 aa12.2□□□□□ -0.46
GAPDHP47-201ENST00000489113 ANO8Q9HCE9 1232 aaPredicted RBP12.2□□□□□ -0.46
GAPDHP47-201ENST00000489113 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
GAPDHP47-201ENST00000489113 TNS2Q63HR2 1409 aa12.2□□□□□ -0.46
GAPDHP47-201ENST00000489113 PPM1GO15355 546 aaPredicted RBP12.19□□□□□ -0.46
GAPDHP47-201ENST00000489113 CCER1Q8TC90 406 aaPredicted RBP12.19□□□□□ -0.46
GAPDHP47-201ENST00000489113 CLSPNQ9HAW4 1339 aa12.18□□□□□ -0.46
GAPDHP47-201ENST00000489113 ABCC6O95255 1503 aa12.18□□□□□ -0.46
GAPDHP47-201ENST00000489113 SMG6Q86US8 1419 aaKnown RBP12.18□□□□□ -0.46
GAPDHP47-201ENST00000489113 PARP4Q9UKK3 1724 aaKnown RBP12.17□□□□□ -0.46
GAPDHP47-201ENST00000489113 TATP17735 454 aaPredicted RBP12.17□□□□□ -0.46
GAPDHP47-201ENST00000489113 PRIM1P49642 420 aaKnown RBP12.17□□□□□ -0.46
GAPDHP47-201ENST00000489113 LRP5O75197 1615 aa12.17□□□□□ -0.46
GAPDHP47-201ENST00000489113 TNS1Q9HBL0 1735 aaKnown RBP12.17□□□□□ -0.46
GAPDHP47-201ENST00000489113 COL18A1P39060 1754 aa12.16□□□□□ -0.46
GAPDHP47-201ENST00000489113 NBPF6Q5VWK0 638 aa12.16□□□□□ -0.46
GAPDHP47-201ENST00000489113 USHBP1Q8N6Y0 703 aa12.16□□□□□ -0.46
GAPDHP47-201ENST00000489113 NBPF4Q96M43 638 aa12.16□□□□□ -0.46
GAPDHP47-201ENST00000489113 PDGFDQ9GZP0 370 aaPredicted RBP12.16□□□□□ -0.46
GAPDHP47-201ENST00000489113 AKAP12Q02952 1782 aa12.15□□□□□ -0.46
GAPDHP47-201ENST00000489113 LRRC37A3O60309 1634 aa12.15□□□□□ -0.46
GAPDHP47-201ENST00000489113 HSP90AB2PQ58FF8 381 aa12.15□□□□□ -0.46
GAPDHP47-201ENST00000489113 SLC27A3Q5K4L6 730 aa12.15□□□□□ -0.46
GAPDHP47-201ENST00000489113 MTFR1LQ9H019 292 aa12.15□□□□□ -0.46
GAPDHP47-201ENST00000489113 CGNL1Q0VF96 1302 aa12.14□□□□□ -0.47
GAPDHP47-201ENST00000489113 YY1P25490 414 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms