RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 CTC1Q2NKJ3 1217 aa9.54□□□□□ -0.88
PDCD4-209ENST00000489049 TPRNQ4KMQ1 711 aa9.53□□□□□ -0.88
PDCD4-209ENST00000489049 DIEXFQ68CQ4 756 aaKnown RBP9.53□□□□□ -0.88
PDCD4-209ENST00000489049 CCDC24Q8N4L8 307 aa9.53□□□□□ -0.88
PDCD4-209ENST00000489049 KRI1Q8N9T8 703 aaKnown RBP9.53□□□□□ -0.88
PDCD4-209ENST00000489049 SNIP1Q8TAD8 396 aaKnown RBP9.53□□□□□ -0.88
PDCD4-209ENST00000489049 MRGPRX2Q96LB1 330 aa9.53□□□□□ -0.88
PDCD4-209ENST00000489049 ATP10BO94823 1461 aa9.53□□□□□ -0.88
PDCD4-209ENST00000489049 CHD1O14646 1710 aa9.52□□□□□ -0.89
PDCD4-209ENST00000489049 SMPD1P17405 629 aa9.52□□□□□ -0.89
PDCD4-209ENST00000489049 JUNDP17535 347 aa9.52□□□□□ -0.89
PDCD4-209ENST00000489049 NUTM1Q86Y26 1132 aa9.52□□□□□ -0.89
PDCD4-209ENST00000489049 SYMPKQ92797 1274 aaKnown RBP9.52□□□□□ -0.89
PDCD4-209ENST00000489049 REPIN1Q9BWE0 567 aaKnown RBP9.52□□□□□ -0.89
PDCD4-209ENST00000489049 CFDP1Q9UEE9 299 aaPredicted RBP9.52□□□□□ -0.89
PDCD4-209ENST00000489049 PTPRKQ15262 1439 aa9.51□□□□□ -0.89
PDCD4-209ENST00000489049 UHRF1BP1LA0JNW5 1464 aa9.51□□□□□ -0.89
PDCD4-209ENST00000489049 MAPKBP1O60336 1514 aa9.51□□□□□ -0.89
PDCD4-209ENST00000489049 GPATCH8Q9UKJ3 1502 aaKnown RBP9.51□□□□□ -0.89
PDCD4-209ENST00000489049 DAPK1P53355 1430 aa9.5□□□□□ -0.89
PDCD4-209ENST00000489049 DNMT1P26358 1616 aaKnown RBP9.5□□□□□ -0.89
PDCD4-209ENST00000489049 KIF14Q15058 1648 aa9.5□□□□□ -0.89
PDCD4-209ENST00000489049 RETREG3Q86VR2 466 aa9.5□□□□□ -0.89
PDCD4-209ENST00000489049 GMPR2Q9P2T1 348 aaKnown RBP9.5□□□□□ -0.89
PDCD4-209ENST00000489049 GCC2Q8IWJ2 1684 aa9.5□□□□□ -0.89
PDCD4-209ENST00000489049 CLASP1Q7Z460 1538 aa9.5□□□□□ -0.89
PDCD4-209ENST00000489049 WNT7BP56706 349 aa9.49□□□□□ -0.89
PDCD4-209ENST00000489049 SKOR1P84550 965 aa9.49□□□□□ -0.89
PDCD4-209ENST00000489049 ABCC5O15440 1437 aa9.48□□□□□ -0.89
PDCD4-209ENST00000489049 ADGRL2O95490 1459 aa9.48□□□□□ -0.89
PDCD4-209ENST00000489049 ABCC10Q5T3U5 1492 aa9.48□□□□□ -0.89
PDCD4-209ENST00000489049 SHANK2Q9UPX8 1470 aa9.48□□□□□ -0.89
PDCD4-209ENST00000489049 J3QL48 77 aa9.48□□□□□ -0.89
PDCD4-209ENST00000489049 ANKRD30AQ9BXX3 1397 aa9.48□□□□□ -0.89
PDCD4-209ENST00000489049 PLEKHH2Q8IVE3 1493 aa9.47□□□□□ -0.89
PDCD4-209ENST00000489049 ABCC2Q92887 1545 aa9.47□□□□□ -0.89
PDCD4-209ENST00000489049 FDX1P10109 184 aa9.47□□□□□ -0.89
PDCD4-209ENST00000489049 SSTR3P32745 418 aaPredicted RBP9.47□□□□□ -0.89
PDCD4-209ENST00000489049 RC3H1Q5TC82 1133 aaKnown RBP9.47□□□□□ -0.89
PDCD4-209ENST00000489049 BARGINQ6ZT62 677 aa9.47□□□□□ -0.89
PDCD4-209ENST00000489049 PCDHGC3Q9UN70 934 aa9.47□□□□□ -0.89
PDCD4-209ENST00000489049 CAMSAP2Q08AD1 1489 aa9.47□□□□□ -0.89
PDCD4-209ENST00000489049 NUDT12Q9BQG2 462 aa9.46□□□□□ -0.9
PDCD4-209ENST00000489049 C11orf95C9JLR9 678 aaPredicted RBP9.45□□□□□ -0.9
PDCD4-209ENST00000489049 ZMYND10O75800 440 aa9.45□□□□□ -0.9
PDCD4-209ENST00000489049 TSPY4P0CV99 314 aa9.45□□□□□ -0.9
PDCD4-209ENST00000489049 TSPY10P0CW01 314 aa9.45□□□□□ -0.9
PDCD4-209ENST00000489049 TREML4Q6UXN2 200 aa9.45□□□□□ -0.9
PDCD4-209ENST00000489049 NCOA1Q15788 1441 aa9.45□□□□□ -0.9
PDCD4-209ENST00000489049 C6orf229H3BNL8 230 aa9.44□□□□□ -0.9
PDCD4-209ENST00000489049 PPP1R15AO75807 674 aaPredicted RBP9.44□□□□□ -0.9
PDCD4-209ENST00000489049 TTLL12Q14166 644 aaPredicted RBP9.44□□□□□ -0.9
PDCD4-209ENST00000489049 AMHR2Q16671 573 aa9.44□□□□□ -0.9
PDCD4-209ENST00000489049 LCE2AQ5TA79 106 aaPredicted RBP9.44□□□□□ -0.9
PDCD4-209ENST00000489049 PTCRAQ6ISU1 281 aaPredicted RBP9.44□□□□□ -0.9
PDCD4-209ENST00000489049 SPIRE2Q8WWL2 714 aa9.44□□□□□ -0.9
PDCD4-209ENST00000489049 KIAA1107Q9UPP5 1409 aa9.44□□□□□ -0.9
PDCD4-209ENST00000489049 ARHGEF5Q12774 1597 aa9.44□□□□□ -0.9
PDCD4-209ENST00000489049 KDM5BQ9UGL1 1544 aa9.43□□□□□ -0.9
PDCD4-209ENST00000489049 TONSLQ96HA7 1378 aa9.43□□□□□ -0.9
PDCD4-209ENST00000489049 ARID3CA6NKF2 412 aa9.43□□□□□ -0.9
PDCD4-209ENST00000489049 HPS1Q92902 700 aa9.43□□□□□ -0.9
PDCD4-209ENST00000489049 ATP13A2Q9NQ11 1180 aa9.43□□□□□ -0.9
PDCD4-209ENST00000489049 RRP7BPQ9NSQ0 103 aa9.43□□□□□ -0.9
PDCD4-209ENST00000489049 ADGBQ8N7X0 1667 aa9.42□□□□□ -0.9
PDCD4-209ENST00000489049 MS4A1P11836 297 aa9.42□□□□□ -0.9
PDCD4-209ENST00000489049 ZC3H15Q8WU90 426 aaKnown RBP9.42□□□□□ -0.9
PDCD4-209ENST00000489049 TRIM52Q96A61 297 aa9.42□□□□□ -0.9
PDCD4-209ENST00000489049 MPHOSPH9Q99550 1183 aa9.42□□□□□ -0.9
PDCD4-209ENST00000489049 ARAP3Q8WWN8 1544 aa9.41□□□□□ -0.9
PDCD4-209ENST00000489049 MOXD2PA6NHM9 499 aa9.41□□□□□ -0.9
PDCD4-209ENST00000489049 CCNYL3P0C7X3 344 aa9.41□□□□□ -0.9
PDCD4-209ENST00000489049 NDUFV2P19404 249 aa9.41□□□□□ -0.9
PDCD4-209ENST00000489049 GIGYF2Q6Y7W6 1299 aaKnown RBP9.41□□□□□ -0.9
PDCD4-209ENST00000489049 CHIC2Q9UKJ5 165 aa9.41□□□□□ -0.9
PDCD4-209ENST00000489049 CDC42BPAQ5VT25 1732 aa9.4□□□□□ -0.9
PDCD4-209ENST00000489049 CROCC2H7BZ55 1655 aa9.39□□□□□ -0.91
PDCD4-209ENST00000489049 PREX2Q70Z35 1606 aa9.39□□□□□ -0.91
PDCD4-209ENST00000489049 ZNF644Q9H582 1327 aaPredicted RBP9.39□□□□□ -0.91
PDCD4-209ENST00000489049 ALDH1A1P00352 501 aa9.39□□□□□ -0.91
PDCD4-209ENST00000489049 PTPRNQ16849 979 aa9.39□□□□□ -0.91
PDCD4-209ENST00000489049 EFCAB2Q5VUJ9 269 aa9.39□□□□□ -0.91
PDCD4-209ENST00000489049 EHBP1Q8NDI1 1231 aa9.39□□□□□ -0.91
PDCD4-209ENST00000489049 CCDC141Q6ZP82 1450 aa9.39□□□□□ -0.91
PDCD4-209ENST00000489049 C9orf84Q5VXU9 1444 aa9.39□□□□□ -0.91
PDCD4-209ENST00000489049 SIAH2O43255 324 aa9.38□□□□□ -0.91
PDCD4-209ENST00000489049 CENPBP07199 599 aaPredicted RBP9.38□□□□□ -0.91
PDCD4-209ENST00000489049 NEUROD1Q13562 356 aa9.38□□□□□ -0.91
PDCD4-209ENST00000489049 FBXO41Q8TF61 875 aa9.38□□□□□ -0.91
PDCD4-209ENST00000489049 ANKRD50Q9ULJ7 1429 aa9.38□□□□□ -0.91
PDCD4-209ENST00000489049 MAST1Q9Y2H9 1570 aa9.37□□□□□ -0.91
PDCD4-209ENST00000489049 MBD5Q9P267 1494 aa9.37□□□□□ -0.91
PDCD4-209ENST00000489049 WFS1O76024 890 aa9.37□□□□□ -0.91
PDCD4-209ENST00000489049 PRR7Q8TB68 274 aa9.37□□□□□ -0.91
PDCD4-209ENST00000489049 TRIM47Q96LD4 638 aa9.37□□□□□ -0.91
PDCD4-209ENST00000489049 SIN3AQ96ST3 1273 aa9.37□□□□□ -0.91
PDCD4-209ENST00000489049 BEGAINQ9BUH8 593 aa9.37□□□□□ -0.91
PDCD4-209ENST00000489049 SENP2Q9HC62 589 aa9.37□□□□□ -0.91
PDCD4-209ENST00000489049 ZNF777Q9ULD5 760 aaPredicted RBP9.37□□□□□ -0.91
PDCD4-209ENST00000489049 PLCH2O75038 1416 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms