RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 SNRPNP63162 240 aaKnown RBP6.63□□□□□ -1.35
PRPF4-203ENST00000488937 MKL2Q9ULH7 1088 aa6.63□□□□□ -1.35
PRPF4-203ENST00000488937 ACDQ96AP0 544 aa6.62□□□□□ -1.35
PRPF4-203ENST00000488937 GRM5P41594 1212 aa6.61□□□□□ -1.35
PRPF4-203ENST00000488937 ARID5BQ14865 1188 aa6.61□□□□□ -1.35
PRPF4-203ENST00000488937 CD163Q86VB7 1156 aa6.61□□□□□ -1.35
PRPF4-203ENST00000488937 KDM4AO75164 1064 aa6.6□□□□□ -1.35
PRPF4-203ENST00000488937 EVA1BQ9NVM1 165 aa6.6□□□□□ -1.35
PRPF4-203ENST00000488937 TULP1O00294 542 aaPredicted RBP6.59□□□□□ -1.35
PRPF4-203ENST00000488937 SPINT1O43278 529 aa6.59□□□□□ -1.35
PRPF4-203ENST00000488937 USP46P62068 366 aa6.59□□□□□ -1.35
PRPF4-203ENST00000488937 LAMC2Q13753 1193 aa6.59□□□□□ -1.35
PRPF4-203ENST00000488937 DOC2BQ14184 412 aa6.59□□□□□ -1.35
PRPF4-203ENST00000488937 SENP3-EIF4A1A0A087X0R7 540 aa6.58□□□□□ -1.36
PRPF4-203ENST00000488937 OIP5O43482 229 aa6.58□□□□□ -1.36
PRPF4-203ENST00000488937 TXKP42681 527 aa6.58□□□□□ -1.36
PRPF4-203ENST00000488937 RETREG3Q86VR2 466 aa6.58□□□□□ -1.36
PRPF4-203ENST00000488937 MS4A1P11836 297 aa6.57□□□□□ -1.36
PRPF4-203ENST00000488937 NLRP7Q8WX94 980 aa6.57□□□□□ -1.36
PRPF4-203ENST00000488937 HLA-CQ95604 372 aa6.57□□□□□ -1.36
PRPF4-203ENST00000488937 SEMA3EO15041 775 aa6.56□□□□□ -1.36
PRPF4-203ENST00000488937 KCNH2Q12809 1159 aa6.56□□□□□ -1.36
PRPF4-203ENST00000488937 PTPRNQ16849 979 aa6.56□□□□□ -1.36
PRPF4-203ENST00000488937 CHRNA4P43681 627 aa6.55□□□□□ -1.36
PRPF4-203ENST00000488937 FZD5Q13467 585 aa6.55□□□□□ -1.36
PRPF4-203ENST00000488937 GRIN2CQ14957 1233 aa6.55□□□□□ -1.36
PRPF4-203ENST00000488937 ERICH6Q7L0X2 663 aa6.55□□□□□ -1.36
PRPF4-203ENST00000488937 SYMPKQ92797 1274 aaKnown RBP6.55□□□□□ -1.36
PRPF4-203ENST00000488937 KRTAP4-11Q9BYQ6 195 aa6.55□□□□□ -1.36
PRPF4-203ENST00000488937 CD46P15529 392 aa6.54□□□□□ -1.36
PRPF4-203ENST00000488937 MCTP1Q6DN14 999 aa6.54□□□□□ -1.36
PRPF4-203ENST00000488937 GTF3C3Q9Y5Q9 886 aa6.54□□□□□ -1.36
PRPF4-203ENST00000488937 EMILIN1Q9Y6C2 1016 aa6.54□□□□□ -1.36
PRPF4-203ENST00000488937 HOXA2O43364 376 aa6.53□□□□□ -1.36
PRPF4-203ENST00000488937 GMCL1Q96IK5 515 aa6.53□□□□□ -1.36
PRPF4-203ENST00000488937 KRTAP4-5Q9BYR2 181 aa6.53□□□□□ -1.36
PRPF4-203ENST00000488937 CUEDC1Q9NWM3 386 aaPredicted RBP6.53□□□□□ -1.36
PRPF4-203ENST00000488937 PAX4O43316 350 aa6.52□□□□□ -1.37
PRPF4-203ENST00000488937 RSPO4Q2I0M5 234 aaPredicted RBP6.52□□□□□ -1.37
PRPF4-203ENST00000488937 RBM26Q5T8P6 1007 aaKnown RBP6.52□□□□□ -1.37
PRPF4-203ENST00000488937 FOXR1Q6PIV2 292 aa6.51□□□□□ -1.37
PRPF4-203ENST00000488937 TESPA1A2RU30 521 aaPredicted RBP6.5□□□□□ -1.37
PRPF4-203ENST00000488937 PIK3R2O00459 728 aa6.5□□□□□ -1.37
PRPF4-203ENST00000488937 LRP8Q14114 963 aa6.5□□□□□ -1.37
PRPF4-203ENST00000488937 Q6ZVU0 165 aa6.5□□□□□ -1.37
PRPF4-203ENST00000488937 FMNL2Q96PY5 1086 aa6.5□□□□□ -1.37
PRPF4-203ENST00000488937 PHOX2BQ99453 314 aa6.5□□□□□ -1.37
PRPF4-203ENST00000488937 GPR37O15354 613 aa6.49□□□□□ -1.37
PRPF4-203ENST00000488937 NKAPLQ5M9Q1 402 aa6.49□□□□□ -1.37
PRPF4-203ENST00000488937 ZNF837Q96EG3 531 aaPredicted RBP6.49□□□□□ -1.37
PRPF4-203ENST00000488937 SUV39H2Q9H5I1 410 aa6.49□□□□□ -1.37
PRPF4-203ENST00000488937 NSFL1CQ9UNZ2 370 aaKnown RBP6.49□□□□□ -1.37
PRPF4-203ENST00000488937 CTSOP43234 321 aaPredicted RBP6.48□□□□□ -1.37
PRPF4-203ENST00000488937 LINC00114Q6XXX2 140 aa6.48□□□□□ -1.37
PRPF4-203ENST00000488937 HOMEZQ8IX15 550 aa6.48□□□□□ -1.37
PRPF4-203ENST00000488937 FOXJ1Q92949 421 aa6.48□□□□□ -1.37
PRPF4-203ENST00000488937 SHISA8B8ZZ34 492 aa6.47□□□□□ -1.37
PRPF4-203ENST00000488937 GPR25O00155 361 aa6.47□□□□□ -1.37
PRPF4-203ENST00000488937 FSHRP23945 695 aa6.47□□□□□ -1.37
PRPF4-203ENST00000488937 GATA4P43694 442 aa6.47□□□□□ -1.37
PRPF4-203ENST00000488937 GUCA2AQ02747 115 aa6.47□□□□□ -1.37
PRPF4-203ENST00000488937 TRIM22Q8IYM9 498 aa6.47□□□□□ -1.37
PRPF4-203ENST00000488937 RNF217Q8TC41 542 aa6.47□□□□□ -1.37
PRPF4-203ENST00000488937 RRAGCQ9HB90 399 aa6.47□□□□□ -1.37
PRPF4-203ENST00000488937 GPIHBP1Q8IV16 184 aa6.46□□□□□ -1.38
PRPF4-203ENST00000488937 OXCT2Q9BYC2 517 aaPredicted RBP6.46□□□□□ -1.38
PRPF4-203ENST00000488937 GNB5O14775 395 aa6.45□□□□□ -1.38
PRPF4-203ENST00000488937 KRTAP5-3Q6L8H2 238 aa6.45□□□□□ -1.38
PRPF4-203ENST00000488937 CCDC116Q8IYX3 515 aa6.45□□□□□ -1.38
PRPF4-203ENST00000488937 MAP4K5Q9Y4K4 846 aa6.45□□□□□ -1.38
PRPF4-203ENST00000488937 DYRK3O43781 588 aa6.44□□□□□ -1.38
PRPF4-203ENST00000488937 HYAL3O43820 417 aaPredicted RBP6.44□□□□□ -1.38
PRPF4-203ENST00000488937 MX2P20592 715 aa6.44□□□□□ -1.38
PRPF4-203ENST00000488937 NOP53Q9NZM5 478 aaKnown RBP6.44□□□□□ -1.38
PRPF4-203ENST00000488937 COL17A1Q9UMD9 1497 aaPredicted RBP6.44□□□□□ -1.38
PRPF4-203ENST00000488937 HOXB4P17483 251 aaPredicted RBP6.43□□□□□ -1.38
PRPF4-203ENST00000488937 MAP2K5Q13163 448 aa6.43□□□□□ -1.38
PRPF4-203ENST00000488937 CBLBQ13191 982 aa6.43□□□□□ -1.38
PRPF4-203ENST00000488937 TMEM132AQ24JP5 1023 aa6.43□□□□□ -1.38
PRPF4-203ENST00000488937 C4orf48Q5BLP8 95 aa6.43□□□□□ -1.38
PRPF4-203ENST00000488937 NUTM1Q86Y26 1132 aa6.43□□□□□ -1.38
PRPF4-203ENST00000488937 INSM2Q96T92 566 aaPredicted RBP6.43□□□□□ -1.38
PRPF4-203ENST00000488937 MAP2K3P46734 347 aa6.42□□□□□ -1.38
PRPF4-203ENST00000488937 TRERF1Q96PN7 1200 aa6.42□□□□□ -1.38
PRPF4-203ENST00000488937 PRSS36Q5K4E3 855 aa6.41□□□□□ -1.38
PRPF4-203ENST00000488937 BPHLQ86WA6 291 aaPredicted RBP6.41□□□□□ -1.38
PRPF4-203ENST00000488937 POLMQ9NP87 494 aaPredicted RBP6.41□□□□□ -1.38
PRPF4-203ENST00000488937 PGPEP1Q9NXJ5 209 aa6.41□□□□□ -1.38
PRPF4-203ENST00000488937 C6orf229H3BNL8 230 aa6.4□□□□□ -1.38
PRPF4-203ENST00000488937 MDM2Q00987 491 aaPredicted RBP6.4□□□□□ -1.38
PRPF4-203ENST00000488937 AGERQ15109 404 aa6.4□□□□□ -1.38
PRPF4-203ENST00000488937 DESI1Q6ICB0 168 aa6.4□□□□□ -1.38
PRPF4-203ENST00000488937 FDX1P10109 184 aa6.39□□□□□ -1.39
PRPF4-203ENST00000488937 CLCN1P35523 988 aa6.39□□□□□ -1.39
PRPF4-203ENST00000488937 DBN1Q16643 649 aa6.39□□□□□ -1.39
PRPF4-203ENST00000488937 C1orf229Q6ZS94 237 aaPredicted RBP6.39□□□□□ -1.39
PRPF4-203ENST00000488937 VASH1Q7L8A9 365 aaPredicted RBP6.39□□□□□ -1.39
PRPF4-203ENST00000488937 EDARADDQ8WWZ3 215 aa6.39□□□□□ -1.39
PRPF4-203ENST00000488937 SPDYE5A6NIY4 337 aa6.38□□□□□ -1.39
PRPF4-203ENST00000488937 PPP1R26Q5T8A7 1209 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms