RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 TNS1Q9HBL0 1735 aaKnown RBP19.41■□□□□ 0.7
SPTLC1-207ENST00000488921 TCP11L2Q8N4U5 519 aa19.4■□□□□ 0.7
SPTLC1-207ENST00000488921 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.39■□□□□ 0.69
SPTLC1-207ENST00000488921 SLC12A5Q9H2X9 1139 aa19.39■□□□□ 0.69
SPTLC1-207ENST00000488921 TMF1P82094 1093 aa19.38■□□□□ 0.69
SPTLC1-207ENST00000488921 ARHGEF25Q86VW2 580 aa19.38■□□□□ 0.69
SPTLC1-207ENST00000488921 SOX12O15370 315 aa19.37■□□□□ 0.69
SPTLC1-207ENST00000488921 ZRANB1Q9UGI0 708 aa19.37■□□□□ 0.69
SPTLC1-207ENST00000488921 LRRC37A3O60309 1634 aa19.36■□□□□ 0.69
SPTLC1-207ENST00000488921 WDR17Q8IZU2 1322 aa19.36■□□□□ 0.69
SPTLC1-207ENST00000488921 BAG6P46379 1132 aa19.36■□□□□ 0.69
SPTLC1-207ENST00000488921 OVOS2A0A0J9YW53 1432 aa19.35■□□□□ 0.69
SPTLC1-207ENST00000488921 OVOS2Q6IE36 1432 aa19.35■□□□□ 0.69
SPTLC1-207ENST00000488921 PDE3BQ13370 1112 aa19.35■□□□□ 0.69
SPTLC1-207ENST00000488921 TOM1L2Q6ZVM7 507 aa19.35■□□□□ 0.69
SPTLC1-207ENST00000488921 NME9Q86XW9 330 aa19.35■□□□□ 0.69
SPTLC1-207ENST00000488921 ANKRD36BQ8N2N9 1353 aa19.34■□□□□ 0.69
SPTLC1-207ENST00000488921 CDCA8Q53HL2 280 aa19.34■□□□□ 0.69
SPTLC1-207ENST00000488921 FAM196AQ6ZSG2 479 aa19.34■□□□□ 0.69
SPTLC1-207ENST00000488921 FAM182BQ5T319 152 aa19.33■□□□□ 0.68
SPTLC1-207ENST00000488921 DEFB132Q7Z7B7 95 aa19.33■□□□□ 0.68
SPTLC1-207ENST00000488921 DISP2A7MBM2 1401 aa19.33■□□□□ 0.68
SPTLC1-207ENST00000488921 KIF20BQ96Q89 1820 aa19.32■□□□□ 0.68
SPTLC1-207ENST00000488921 CCER1Q8TC90 406 aaPredicted RBP19.32■□□□□ 0.68
SPTLC1-207ENST00000488921 AXIN2Q9Y2T1 843 aa19.32■□□□□ 0.68
SPTLC1-207ENST00000488921 MYOM1P52179 1685 aa19.32■□□□□ 0.68
SPTLC1-207ENST00000488921 FAM208AQ9UK61 1670 aaKnown RBP19.32■□□□□ 0.68
SPTLC1-207ENST00000488921 C11orf95C9JLR9 678 aaPredicted RBP19.31■□□□□ 0.68
SPTLC1-207ENST00000488921 CSB-PGBD3P0DP91 1061 aa19.3■□□□□ 0.68
SPTLC1-207ENST00000488921 CDCA7Q9BWT1 371 aaPredicted RBP19.3■□□□□ 0.68
SPTLC1-207ENST00000488921 PEAK1Q9H792 1746 aa19.29■□□□□ 0.68
SPTLC1-207ENST00000488921 OVOS2A0A0G2JMS6 1433 aa19.29■□□□□ 0.68
SPTLC1-207ENST00000488921 SBF2Q86WG5 1849 aa19.29■□□□□ 0.68
SPTLC1-207ENST00000488921 CCDC7Q96M83 1385 aa19.29■□□□□ 0.68
SPTLC1-207ENST00000488921 CARD10Q9BWT7 1032 aa19.28■□□□□ 0.68
SPTLC1-207ENST00000488921 DDB1Q16531 1140 aa19.27■□□□□ 0.68
SPTLC1-207ENST00000488921 COG3Q96JB2 828 aa19.27■□□□□ 0.68
SPTLC1-207ENST00000488921 ERBB3P21860 1342 aa19.26■□□□□ 0.67
SPTLC1-207ENST00000488921 RREB1Q92766 1687 aa19.26■□□□□ 0.67
SPTLC1-207ENST00000488921 RGPD3A6NKT7 1758 aaPredicted RBP19.25■□□□□ 0.67
SPTLC1-207ENST00000488921 RGPD4Q7Z3J3 1758 aa19.25■□□□□ 0.67
SPTLC1-207ENST00000488921 PARD3Q8TEW0 1356 aa19.25■□□□□ 0.67
SPTLC1-207ENST00000488921 TRIM37O94972 964 aa19.25■□□□□ 0.67
SPTLC1-207ENST00000488921 EN1Q05925 392 aaPredicted RBP19.24■□□□□ 0.67
SPTLC1-207ENST00000488921 TNS2Q63HR2 1409 aa19.22■□□□□ 0.67
SPTLC1-207ENST00000488921 NUP188Q5SRE5 1749 aa19.21■□□□□ 0.67
SPTLC1-207ENST00000488921 BCL9O00512 1426 aa19.2■□□□□ 0.66
SPTLC1-207ENST00000488921 APBA3O96018 575 aa19.2■□□□□ 0.66
SPTLC1-207ENST00000488921 ANKRD24Q8TF21 1146 aa19.2■□□□□ 0.66
SPTLC1-207ENST00000488921 IP6K1Q92551 441 aa19.2■□□□□ 0.66
SPTLC1-207ENST00000488921 NLRP2Q9NX02 1062 aa19.2■□□□□ 0.66
SPTLC1-207ENST00000488921 RTL1A6NKG5 1358 aa19.19■□□□□ 0.66
SPTLC1-207ENST00000488921 EIF4G2P78344 907 aaKnown RBP eCLIP19.19■□□□□ 0.66
SPTLC1-207ENST00000488921 EZH2Q15910 746 aaKnown RBP19.18■□□□□ 0.66
SPTLC1-207ENST00000488921 LRP5O75197 1615 aa19.18■□□□□ 0.66
SPTLC1-207ENST00000488921 EXOC5O00471 708 aa19.17■□□□□ 0.66
SPTLC1-207ENST00000488921 FYB1O15117 783 aa19.17■□□□□ 0.66
SPTLC1-207ENST00000488921 CAMKK2Q96RR4 588 aa19.17■□□□□ 0.66
SPTLC1-207ENST00000488921 MAP3K19Q56UN5 1328 aa19.17■□□□□ 0.66
SPTLC1-207ENST00000488921 NSD3Q9BZ95 1437 aa19.17■□□□□ 0.66
SPTLC1-207ENST00000488921 RGPD2P0DJD1 1756 aa19.16■□□□□ 0.66
SPTLC1-207ENST00000488921 IL2RBP14784 551 aa19.16■□□□□ 0.66
SPTLC1-207ENST00000488921 AMPHP49418 695 aa19.16■□□□□ 0.66
SPTLC1-207ENST00000488921 GGNBP2Q9H3C7 697 aa19.16■□□□□ 0.66
SPTLC1-207ENST00000488921 NHSQ6T4R5 1651 aa19.16■□□□□ 0.66
SPTLC1-207ENST00000488921 ANKRD26Q9UPS8 1709 aa19.16■□□□□ 0.66
SPTLC1-207ENST00000488921 MARCH10Q8NA82 808 aaPredicted RBP19.15■□□□□ 0.66
SPTLC1-207ENST00000488921 HOXC9P31274 260 aa19.14■□□□□ 0.65
SPTLC1-207ENST00000488921 SMG6Q86US8 1419 aaKnown RBP19.14■□□□□ 0.65
SPTLC1-207ENST00000488921 BCL11BQ9C0K0 894 aaPredicted RBP19.13■□□□□ 0.65
SPTLC1-207ENST00000488921 KIF24Q5T7B8 1368 aa19.13■□□□□ 0.65
SPTLC1-207ENST00000488921 SRCAPQ6ZRS2 3230 aa19.12■□□□□ 0.65
SPTLC1-207ENST00000488921 PSDA5PKW4 1024 aaPredicted RBP19.11■□□□□ 0.65
SPTLC1-207ENST00000488921 HSPA5P11021 654 aaKnown RBP19.11■□□□□ 0.65
SPTLC1-207ENST00000488921 LTV1Q96GA3 475 aaPredicted RBP19.11■□□□□ 0.65
SPTLC1-207ENST00000488921 POLR3GLQ9BT43 218 aa19.11■□□□□ 0.65
SPTLC1-207ENST00000488921 FLT4P35916 1363 aa19.1■□□□□ 0.65
SPTLC1-207ENST00000488921 CGNL1Q0VF96 1302 aa19.1■□□□□ 0.65
SPTLC1-207ENST00000488921 PLSCR1O15162 318 aa19.1■□□□□ 0.65
SPTLC1-207ENST00000488921 RRS1Q15050 365 aaKnown RBP19.1■□□□□ 0.65
SPTLC1-207ENST00000488921 CARD14Q9BXL6 1004 aa19.1■□□□□ 0.65
SPTLC1-207ENST00000488921 MAP2P11137 1827 aaKnown RBP19.09■□□□□ 0.65
SPTLC1-207ENST00000488921 R3HDM1Q15032 1099 aaKnown RBP19.09■□□□□ 0.65
SPTLC1-207ENST00000488921 SHANK3Q9BYB0 1731 aa19.08■□□□□ 0.65
SPTLC1-207ENST00000488921 FBLN1P23142 703 aa19.08■□□□□ 0.64
SPTLC1-207ENST00000488921 NBPF14Q5TI25 921 aa19.08■□□□□ 0.64
SPTLC1-207ENST00000488921 INSRP06213 1382 aa19.07■□□□□ 0.64
SPTLC1-207ENST00000488921 BTAF1O14981 1849 aa19.07■□□□□ 0.64
SPTLC1-207ENST00000488921 KAT6BQ8WYB5 2073 aa19.07■□□□□ 0.64
SPTLC1-207ENST00000488921 DOT1LQ8TEK3 1739 aa19.05■□□□□ 0.64
SPTLC1-207ENST00000488921 MEGF6O75095 1541 aa19.04■□□□□ 0.64
SPTLC1-207ENST00000488921 NSD2O96028 1365 aa19.02■□□□□ 0.64
SPTLC1-207ENST00000488921 HSP90AB2PQ58FF8 381 aa19.01■□□□□ 0.63
SPTLC1-207ENST00000488921 PTF1AQ7RTS3 328 aa19.01■□□□□ 0.63
SPTLC1-207ENST00000488921 ACSBG1Q96GR2 724 aa19.01■□□□□ 0.63
SPTLC1-207ENST00000488921 NBPF6Q5VWK0 638 aa19■□□□□ 0.63
SPTLC1-207ENST00000488921 DDX54Q8TDD1 881 aaKnown RBP19■□□□□ 0.63
SPTLC1-207ENST00000488921 RAPGEF4Q8WZA2 1011 aa19■□□□□ 0.63
SPTLC1-207ENST00000488921 NBPF4Q96M43 638 aa19■□□□□ 0.63
SPTLC1-207ENST00000488921 EMILIN1Q9Y6C2 1016 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms