RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 NUDCQ9Y266 331 aa14.29□□□□□ -0.12
USP11-209ENST00000488848 ZBED9Q6R2W3 1325 aa14.29□□□□□ -0.12
USP11-209ENST00000488848 HOXC9P31274 260 aa14.28□□□□□ -0.12
USP11-209ENST00000488848 WDR43Q15061 677 aaKnown RBP eCLIP14.28□□□□□ -0.12
USP11-209ENST00000488848 ADAMTS8Q9UP79 889 aa14.28□□□□□ -0.12
USP11-209ENST00000488848 IGSF1Q8N6C5 1336 aa14.26□□□□□ -0.13
USP11-209ENST00000488848 FBLN1P23142 703 aa14.26□□□□□ -0.13
USP11-209ENST00000488848 FAM9BQ8IZU0 186 aa14.26□□□□□ -0.13
USP11-209ENST00000488848 FCHSD2O94868 740 aa14.25□□□□□ -0.13
USP11-209ENST00000488848 EIF4A2Q14240 407 aaKnown RBP14.25□□□□□ -0.13
USP11-209ENST00000488848 UBAP1LF5GYI3 381 aa14.24□□□□□ -0.13
USP11-209ENST00000488848 HSP90AB2PQ58FF8 381 aa14.24□□□□□ -0.13
USP11-209ENST00000488848 NUTM2GQ5VZR2 741 aa14.24□□□□□ -0.13
USP11-209ENST00000488848 PLEKHF1Q96S99 279 aa14.24□□□□□ -0.13
USP11-209ENST00000488848 PNNQ9H307 717 aaKnown RBP14.24□□□□□ -0.13
USP11-209ENST00000488848 COL14A1Q05707 1796 aaKnown RBP14.24□□□□□ -0.13
USP11-209ENST00000488848 ZNF521Q96K83 1311 aa14.23□□□□□ -0.13
USP11-209ENST00000488848 RSPH6AQ9H0K4 717 aa14.23□□□□□ -0.13
USP11-209ENST00000488848 ERBB3P21860 1342 aa14.22□□□□□ -0.13
USP11-209ENST00000488848 AMPHP49418 695 aa14.22□□□□□ -0.13
USP11-209ENST00000488848 RUNDC1Q96C34 613 aa14.22□□□□□ -0.13
USP11-209ENST00000488848 KIAA0232Q92628 1395 aa14.22□□□□□ -0.13
USP11-209ENST00000488848 CCDC27Q2M243 656 aa14.21□□□□□ -0.13
USP11-209ENST00000488848 JCADQ9P266 1359 aa14.21□□□□□ -0.14
USP11-209ENST00000488848 RGPD5Q99666 1765 aa14.2□□□□□ -0.14
USP11-209ENST00000488848 U2AF1L5P0DN76 240 aaPredicted RBP14.2□□□□□ -0.14
USP11-209ENST00000488848 HNRNPUQ00839 825 aaKnown RBP eCLIP14.2□□□□□ -0.14
USP11-209ENST00000488848 U2AF1Q01081 240 aaKnown RBP eCLIP14.2□□□□□ -0.14
USP11-209ENST00000488848 NWD2Q9ULI1 1742 aa14.2□□□□□ -0.14
USP11-209ENST00000488848 COL5A2P05997 1499 aaPredicted RBP14.19□□□□□ -0.14
USP11-209ENST00000488848 PPM1GO15355 546 aaPredicted RBP14.19□□□□□ -0.14
USP11-209ENST00000488848 LMOD2Q6P5Q4 547 aa14.19□□□□□ -0.14
USP11-209ENST00000488848 PDE3BQ13370 1112 aa14.18□□□□□ -0.14
USP11-209ENST00000488848 NRAPQ86VF7 1730 aa14.18□□□□□ -0.14
USP11-209ENST00000488848 EYA1Q99502 592 aa14.17□□□□□ -0.14
USP11-209ENST00000488848 PLCH1Q4KWH8 1693 aa14.17□□□□□ -0.14
USP11-209ENST00000488848 RGPD2P0DJD1 1756 aa14.17□□□□□ -0.14
USP11-209ENST00000488848 AXIN2Q9Y2T1 843 aa14.16□□□□□ -0.14
USP11-209ENST00000488848 SPATA31A6Q5VVP1 1343 aa14.15□□□□□ -0.14
USP11-209ENST00000488848 U2SURPO15042 1029 aaKnown RBP14.15□□□□□ -0.14
USP11-209ENST00000488848 SOX12O15370 315 aa14.15□□□□□ -0.14
USP11-209ENST00000488848 CENPBP07199 599 aaPredicted RBP14.15□□□□□ -0.14
USP11-209ENST00000488848 CABLES1Q8TDN4 633 aa14.15□□□□□ -0.14
USP11-209ENST00000488848 PKD1L3Q7Z443 1732 aa14.15□□□□□ -0.14
USP11-209ENST00000488848 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.15□□□□□ -0.14
USP11-209ENST00000488848 SLIT2O94813 1529 aa14.15□□□□□ -0.14
USP11-209ENST00000488848 ADAMTS7Q9UKP4 1686 aa14.14□□□□□ -0.15
USP11-209ENST00000488848 ZC3H6P61129 1189 aaKnown RBP14.14□□□□□ -0.15
USP11-209ENST00000488848 TCP11L2Q8N4U5 519 aa14.14□□□□□ -0.15
USP11-209ENST00000488848 ANKRD24Q8TF21 1146 aa14.14□□□□□ -0.15
USP11-209ENST00000488848 YTHDC1Q96MU7 727 aaKnown RBP14.14□□□□□ -0.15
USP11-209ENST00000488848 PRDM11Q9NQV5 511 aa14.14□□□□□ -0.15
USP11-209ENST00000488848 LRRC37A3O60309 1634 aa14.14□□□□□ -0.15
USP11-209ENST00000488848 WDR17Q8IZU2 1322 aa14.14□□□□□ -0.15
USP11-209ENST00000488848 DLG5Q8TDM6 1919 aa14.13□□□□□ -0.15
USP11-209ENST00000488848 APAF1O14727 1248 aa14.13□□□□□ -0.15
USP11-209ENST00000488848 PRKAR2BP31323 418 aa14.13□□□□□ -0.15
USP11-209ENST00000488848 PIP4K2BP78356 416 aa14.13□□□□□ -0.15
USP11-209ENST00000488848 MAPK8IP3Q9UPT6 1336 aa14.13□□□□□ -0.15
USP11-209ENST00000488848 TMPOP42166 694 aaKnown RBP14.12□□□□□ -0.15
USP11-209ENST00000488848 NFE2L2Q16236 605 aa14.12□□□□□ -0.15
USP11-209ENST00000488848 NBPF6Q5VWK0 638 aa14.12□□□□□ -0.15
USP11-209ENST00000488848 SULT6B1Q6IMI4 303 aa14.12□□□□□ -0.15
USP11-209ENST00000488848 AEBP1Q8IUX7 1158 aa14.12□□□□□ -0.15
USP11-209ENST00000488848 NBPF4Q96M43 638 aa14.12□□□□□ -0.15
USP11-209ENST00000488848 OVOS2A0A0G2JMS6 1433 aa14.12□□□□□ -0.15
USP11-209ENST00000488848 PARP4Q9UKK3 1724 aaKnown RBP14.12□□□□□ -0.15
USP11-209ENST00000488848 IL16Q14005 1332 aa14.12□□□□□ -0.15
USP11-209ENST00000488848 WDR63Q8IWG1 891 aa14.11□□□□□ -0.15
USP11-209ENST00000488848 CCDC146Q8IYE0 955 aa14.11□□□□□ -0.15
USP11-209ENST00000488848 TRMT2AQ8IZ69 625 aaKnown RBP14.11□□□□□ -0.15
USP11-209ENST00000488848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.11□□□□□ -0.15
USP11-209ENST00000488848 WNK3Q9BYP7 1800 aa14.11□□□□□ -0.15
USP11-209ENST00000488848 CRB1P82279 1406 aa14.1□□□□□ -0.15
USP11-209ENST00000488848 FAM83GA6ND36 823 aa14.1□□□□□ -0.15
USP11-209ENST00000488848 WWC1Q8IX03 1113 aa14.1□□□□□ -0.15
USP11-209ENST00000488848 PHACTR3Q96KR7 559 aa14.1□□□□□ -0.15
USP11-209ENST00000488848 LRP6O75581 1613 aa14.09□□□□□ -0.15
USP11-209ENST00000488848 HTATSF1O43719 755 aaKnown RBP14.09□□□□□ -0.15
USP11-209ENST00000488848 NEFMP07197 916 aa14.09□□□□□ -0.15
USP11-209ENST00000488848 HMOX1P09601 288 aa14.09□□□□□ -0.15
USP11-209ENST00000488848 LMOD3Q0VAK6 560 aa14.09□□□□□ -0.15
USP11-209ENST00000488848 CARD10Q9BWT7 1032 aa14.09□□□□□ -0.15
USP11-209ENST00000488848 TRIM35Q9UPQ4 493 aa14.09□□□□□ -0.15
USP11-209ENST00000488848 DISP2A7MBM2 1401 aa14.08□□□□□ -0.15
USP11-209ENST00000488848 GAS2L2Q8NHY3 880 aa14.08□□□□□ -0.16
USP11-209ENST00000488848 MEGF6O75095 1541 aa14.07□□□□□ -0.16
USP11-209ENST00000488848 HAP1P54257 671 aaPredicted RBP14.07□□□□□ -0.16
USP11-209ENST00000488848 CHRNA2Q15822 529 aa14.07□□□□□ -0.16
USP11-209ENST00000488848 AMOTQ4VCS5 1084 aa14.07□□□□□ -0.16
USP11-209ENST00000488848 HSPA1LP34931 641 aa14.06□□□□□ -0.16
USP11-209ENST00000488848 SHANK3Q9BYB0 1731 aa14.06□□□□□ -0.16
USP11-209ENST00000488848 CEMIPQ8WUJ3 1361 aa14.06□□□□□ -0.16
USP11-209ENST00000488848 E9PSI1 815 aa14.05□□□□□ -0.16
USP11-209ENST00000488848 CALD1Q05682 793 aaKnown RBP14.05□□□□□ -0.16
USP11-209ENST00000488848 GOLGA2Q08379 1002 aa14.05□□□□□ -0.16
USP11-209ENST00000488848 SLFN5Q08AF3 891 aa14.05□□□□□ -0.16
USP11-209ENST00000488848 FNBP4Q8N3X1 1017 aaPredicted RBP14.05□□□□□ -0.16
USP11-209ENST00000488848 RIPK4P57078 832 aa14.04□□□□□ -0.16
USP11-209ENST00000488848 MAP3K5Q99683 1374 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms