RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 AATKQ6ZMQ8 1374 aa9.45□□□□□ -0.9
PTCH1-211ENST00000488809 COL18A1P39060 1754 aa9.45□□□□□ -0.9
PTCH1-211ENST00000488809 STK32BQ9NY57 414 aa9.44□□□□□ -0.9
PTCH1-211ENST00000488809 BCL9O00512 1426 aa9.44□□□□□ -0.9
PTCH1-211ENST00000488809 PIK3C2AO00443 1686 aa9.44□□□□□ -0.9
PTCH1-211ENST00000488809 USP6P35125 1406 aa9.43□□□□□ -0.9
PTCH1-211ENST00000488809 WDR17Q8IZU2 1322 aa9.43□□□□□ -0.9
PTCH1-211ENST00000488809 CENPJQ9HC77 1338 aaPredicted RBP9.43□□□□□ -0.9
PTCH1-211ENST00000488809 NLRP6P59044 892 aa9.43□□□□□ -0.9
PTCH1-211ENST00000488809 NHSQ6T4R5 1651 aa9.42□□□□□ -0.9
PTCH1-211ENST00000488809 TRPM1Q7Z4N2 1603 aa9.42□□□□□ -0.9
PTCH1-211ENST00000488809 CPSF1Q10570 1443 aaKnown RBP9.42□□□□□ -0.9
PTCH1-211ENST00000488809 KCNH5Q8NCM2 988 aa9.42□□□□□ -0.9
PTCH1-211ENST00000488809 ANO8Q9HCE9 1232 aaPredicted RBP9.42□□□□□ -0.9
PTCH1-211ENST00000488809 ABCC6O95255 1503 aa9.41□□□□□ -0.9
PTCH1-211ENST00000488809 ZBTB7AO95365 584 aa9.41□□□□□ -0.9
PTCH1-211ENST00000488809 CSB-PGBD3P0DP91 1061 aa9.41□□□□□ -0.9
PTCH1-211ENST00000488809 CCDC7Q96M83 1385 aa9.4□□□□□ -0.9
PTCH1-211ENST00000488809 EXOC5O00471 708 aa9.4□□□□□ -0.9
PTCH1-211ENST00000488809 SLC15A2Q16348 729 aa9.4□□□□□ -0.9
PTCH1-211ENST00000488809 MTFR1LQ9H019 292 aa9.4□□□□□ -0.9
PTCH1-211ENST00000488809 CABP2Q9NPB3 220 aa9.4□□□□□ -0.9
PTCH1-211ENST00000488809 UTRNP46939 3433 aa9.4□□□□□ -0.91
PTCH1-211ENST00000488809 QSER1Q2KHR3 1735 aa9.39□□□□□ -0.91
PTCH1-211ENST00000488809 EVC2Q86UK5 1308 aa9.39□□□□□ -0.91
PTCH1-211ENST00000488809 TXNRD1Q16881 649 aa9.39□□□□□ -0.91
PTCH1-211ENST00000488809 MARCH10Q8NA82 808 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-211ENST00000488809 ZNF784Q8NCA9 323 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-211ENST00000488809 CARD10Q9BWT7 1032 aa9.39□□□□□ -0.91
PTCH1-211ENST00000488809 CABP1Q9NZU7 370 aa9.39□□□□□ -0.91
PTCH1-211ENST00000488809 BTAF1O14981 1849 aa9.39□□□□□ -0.91
PTCH1-211ENST00000488809 LTN1O94822 1766 aa9.39□□□□□ -0.91
PTCH1-211ENST00000488809 TNS2Q63HR2 1409 aa9.39□□□□□ -0.91
PTCH1-211ENST00000488809 TTC21AQ8NDW8 1320 aa9.38□□□□□ -0.91
PTCH1-211ENST00000488809 PTGER2P43116 358 aa9.38□□□□□ -0.91
PTCH1-211ENST00000488809 SYT17Q9BSW7 474 aa9.38□□□□□ -0.91
PTCH1-211ENST00000488809 ZNF692Q9BU19 519 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-211ENST00000488809 FHDC1Q9C0D6 1143 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-211ENST00000488809 ATF5Q9Y2D1 282 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-211ENST00000488809 MON2Q7Z3U7 1717 aa9.38□□□□□ -0.91
PTCH1-211ENST00000488809 SENP3-EIF4A1A0A087X0R7 540 aa9.37□□□□□ -0.91
PTCH1-211ENST00000488809 NBPF1Q3BBV0 1214 aa9.37□□□□□ -0.91
PTCH1-211ENST00000488809 ARHGEF25Q86VW2 580 aa9.37□□□□□ -0.91
PTCH1-211ENST00000488809 MAP3K5Q99683 1374 aa9.37□□□□□ -0.91
PTCH1-211ENST00000488809 USP54Q70EL1 1684 aa9.36□□□□□ -0.91
PTCH1-211ENST00000488809 FAM208AQ9UK61 1670 aaKnown RBP9.36□□□□□ -0.91
PTCH1-211ENST00000488809 PAPPAQ13219 1627 aa9.36□□□□□ -0.91
PTCH1-211ENST00000488809 PROM2Q8N271 834 aa9.36□□□□□ -0.91
PTCH1-211ENST00000488809 ARXQ96QS3 562 aa9.36□□□□□ -0.91
PTCH1-211ENST00000488809 PDGFDQ9GZP0 370 aaPredicted RBP9.36□□□□□ -0.91
PTCH1-211ENST00000488809 AXIN2Q9Y2T1 843 aa9.36□□□□□ -0.91
PTCH1-211ENST00000488809 NFAT5O94916 1531 aa9.36□□□□□ -0.91
PTCH1-211ENST00000488809 TTC21BQ7Z4L5 1316 aa9.35□□□□□ -0.91
PTCH1-211ENST00000488809 SOX12O15370 315 aa9.35□□□□□ -0.91
PTCH1-211ENST00000488809 PTF1AQ7RTS3 328 aa9.35□□□□□ -0.91
PTCH1-211ENST00000488809 COL24A1Q17RW2 1714 aa9.34□□□□□ -0.91
PTCH1-211ENST00000488809 C1QTNF8P60827 252 aa9.34□□□□□ -0.91
PTCH1-211ENST00000488809 KTN1Q86UP2 1357 aaKnown RBP9.34□□□□□ -0.91
PTCH1-211ENST00000488809 IL2RBP14784 551 aa9.33□□□□□ -0.92
PTCH1-211ENST00000488809 POLD1P28340 1107 aa9.33□□□□□ -0.92
PTCH1-211ENST00000488809 GPR162Q16538 588 aa9.33□□□□□ -0.92
PTCH1-211ENST00000488809 SLC16A10Q8TF71 515 aa9.33□□□□□ -0.92
PTCH1-211ENST00000488809 SGIP1Q9BQI5 828 aa9.33□□□□□ -0.92
PTCH1-211ENST00000488809 TUBGCP6Q96RT7 1819 aa9.33□□□□□ -0.92
PTCH1-211ENST00000488809 ERBB3P21860 1342 aa9.32□□□□□ -0.92
PTCH1-211ENST00000488809 GIGYF1O75420 1035 aaPredicted RBP9.32□□□□□ -0.92
PTCH1-211ENST00000488809 ACSBG1Q96GR2 724 aa9.32□□□□□ -0.92
PTCH1-211ENST00000488809 NLRP2Q9NX02 1062 aa9.32□□□□□ -0.92
PTCH1-211ENST00000488809 SLC27A3Q5K4L6 730 aa9.31□□□□□ -0.92
PTCH1-211ENST00000488809 KLHL34Q8N239 644 aa9.31□□□□□ -0.92
PTCH1-211ENST00000488809 ROCK2O75116 1388 aaKnown RBP9.31□□□□□ -0.92
PTCH1-211ENST00000488809 LY75O60449 1722 aa9.31□□□□□ -0.92
PTCH1-211ENST00000488809 DOT1LQ8TEK3 1739 aa9.31□□□□□ -0.92
PTCH1-211ENST00000488809 USP31Q70CQ4 1352 aa9.3□□□□□ -0.92
PTCH1-211ENST00000488809 HMGB2P26583 209 aaKnown RBP9.29□□□□□ -0.92
PTCH1-211ENST00000488809 PELP1Q8IZL8 1130 aaKnown RBP9.29□□□□□ -0.92
PTCH1-211ENST00000488809 SBNO2Q9Y2G9 1366 aa9.28□□□□□ -0.92
PTCH1-211ENST00000488809 GRIN3BO60391 1043 aa9.28□□□□□ -0.92
PTCH1-211ENST00000488809 ZNF827Q17R98 1081 aa9.28□□□□□ -0.92
PTCH1-211ENST00000488809 HDGFL2Q7Z4V5 671 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-211ENST00000488809 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.28□□□□□ -0.92
PTCH1-211ENST00000488809 ANKRD24Q8TF21 1146 aa9.28□□□□□ -0.92
PTCH1-211ENST00000488809 GOLGB1Q14789 3259 aaKnown RBP9.28□□□□□ -0.92
PTCH1-211ENST00000488809 SHANK3Q9BYB0 1731 aa9.28□□□□□ -0.92
PTCH1-211ENST00000488809 AKT1S1Q96B36 256 aa9.27□□□□□ -0.93
PTCH1-211ENST00000488809 TFCP2L1Q9NZI6 479 aa9.27□□□□□ -0.93
PTCH1-211ENST00000488809 EDC4Q6P2E9 1401 aaKnown RBP9.27□□□□□ -0.93
PTCH1-211ENST00000488809 IFFO2Q5TF58 517 aa9.26□□□□□ -0.93
PTCH1-211ENST00000488809 L3MBTL2Q969R5 705 aa9.26□□□□□ -0.93
PTCH1-211ENST00000488809 SYTL4Q96C24 671 aaPredicted RBP9.26□□□□□ -0.93
PTCH1-211ENST00000488809 LRRC4BQ9NT99 713 aa9.26□□□□□ -0.93
PTCH1-211ENST00000488809 PNPLA7Q6ZV29 1317 aa9.26□□□□□ -0.93
PTCH1-211ENST00000488809 ANKRD36BQ8N2N9 1353 aa9.25□□□□□ -0.93
PTCH1-211ENST00000488809 RGPD2P0DJD1 1756 aa9.25□□□□□ -0.93
PTCH1-211ENST00000488809 DDX54Q8TDD1 881 aaKnown RBP9.25□□□□□ -0.93
PTCH1-211ENST00000488809 TMC1Q8TDI8 760 aa9.25□□□□□ -0.93
PTCH1-211ENST00000488809 TERF2IPQ9NYB0 399 aa9.25□□□□□ -0.93
PTCH1-211ENST00000488809 C5P01031 1676 aa9.25□□□□□ -0.93
PTCH1-211ENST00000488809 TAF1LQ8IZX4 1826 aa9.24□□□□□ -0.93
PTCH1-211ENST00000488809 MSH5O43196 834 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms