RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 ARHGEF25Q86VW2 580 aa27.33■■□□□ 1.97
GGPS1-206ENST00000488594 RGPD3A6NKT7 1758 aaPredicted RBP27.32■■□□□ 1.96
GGPS1-206ENST00000488594 RGPD4Q7Z3J3 1758 aa27.32■■□□□ 1.96
GGPS1-206ENST00000488594 TTC21BQ7Z4L5 1316 aa27.32■■□□□ 1.96
GGPS1-206ENST00000488594 TTC21AQ8NDW8 1320 aa27.32■■□□□ 1.96
GGPS1-206ENST00000488594 BCL9O00512 1426 aa27.32■■□□□ 1.96
GGPS1-206ENST00000488594 TRPM1Q7Z4N2 1603 aa27.32■■□□□ 1.96
GGPS1-206ENST00000488594 KCNQ2O43526 872 aa27.32■■□□□ 1.96
GGPS1-206ENST00000488594 PPP1R1BQ9UD71 204 aaPredicted RBP27.32■■□□□ 1.96
GGPS1-206ENST00000488594 COL18A1P39060 1754 aa27.32■■□□□ 1.96
GGPS1-206ENST00000488594 ROCK2O75116 1388 aaKnown RBP27.31■■□□□ 1.96
GGPS1-206ENST00000488594 CARD10Q9BWT7 1032 aa27.29■■□□□ 1.96
GGPS1-206ENST00000488594 CSB-PGBD3P0DP91 1061 aa27.28■■□□□ 1.96
GGPS1-206ENST00000488594 NINLQ9Y2I6 1382 aa27.27■■□□□ 1.96
GGPS1-206ENST00000488594 MARCH10Q8NA82 808 aaPredicted RBP27.27■■□□□ 1.96
GGPS1-206ENST00000488594 SBF2Q86WG5 1849 aa27.25■■□□□ 1.95
GGPS1-206ENST00000488594 DCAF8L1A6NGE4 600 aa27.24■■□□□ 1.95
GGPS1-206ENST00000488594 SOX12O15370 315 aa27.24■■□□□ 1.95
GGPS1-206ENST00000488594 KTN1Q86UP2 1357 aaKnown RBP27.24■■□□□ 1.95
GGPS1-206ENST00000488594 WNK3Q9BYP7 1800 aa27.23■■□□□ 1.95
GGPS1-206ENST00000488594 SIN3AQ96ST3 1273 aa27.23■■□□□ 1.95
GGPS1-206ENST00000488594 CCDC7Q96M83 1385 aa27.23■■□□□ 1.95
GGPS1-206ENST00000488594 AKAP12Q02952 1782 aa27.23■■□□□ 1.95
GGPS1-206ENST00000488594 ABCC6O95255 1503 aa27.23■■□□□ 1.95
GGPS1-206ENST00000488594 EXOC5O00471 708 aa27.22■■□□□ 1.95
GGPS1-206ENST00000488594 PTF1AQ7RTS3 328 aa27.22■■□□□ 1.95
GGPS1-206ENST00000488594 ANO8Q9HCE9 1232 aaPredicted RBP27.22■■□□□ 1.95
GGPS1-206ENST00000488594 YY1P25490 414 aa27.22■■□□□ 1.95
GGPS1-206ENST00000488594 NFAT5O94916 1531 aa27.21■■□□□ 1.95
GGPS1-206ENST00000488594 NEUROD1Q13562 356 aa27.2■■□□□ 1.94
GGPS1-206ENST00000488594 PROM2Q8N271 834 aa27.2■■□□□ 1.94
GGPS1-206ENST00000488594 SBNO2Q9Y2G9 1366 aa27.19■■□□□ 1.94
GGPS1-206ENST00000488594 TNS2Q63HR2 1409 aa27.16■■□□□ 1.94
GGPS1-206ENST00000488594 USP31Q70CQ4 1352 aa27.16■■□□□ 1.94
GGPS1-206ENST00000488594 TXNRD1Q16881 649 aa27.16■■□□□ 1.94
GGPS1-206ENST00000488594 STK32BQ9NY57 414 aa27.15■■□□□ 1.94
GGPS1-206ENST00000488594 CASZ1Q86V15 1759 aa27.15■■□□□ 1.94
GGPS1-206ENST00000488594 RGPD5Q99666 1765 aa27.14■■□□□ 1.94
GGPS1-206ENST00000488594 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.12■■□□□ 1.93
GGPS1-206ENST00000488594 MON2Q7Z3U7 1717 aa27.12■■□□□ 1.93
GGPS1-206ENST00000488594 ERBB3P21860 1342 aa27.12■■□□□ 1.93
GGPS1-206ENST00000488594 ZBTB7AO95365 584 aa27.1■■□□□ 1.93
GGPS1-206ENST00000488594 SLC15A2Q16348 729 aa27.1■■□□□ 1.93
GGPS1-206ENST00000488594 PDGFDQ9GZP0 370 aaPredicted RBP27.1■■□□□ 1.93
GGPS1-206ENST00000488594 NLRP2Q9NX02 1062 aa27.09■■□□□ 1.93
GGPS1-206ENST00000488594 HDGFL2Q7Z4V5 671 aaPredicted RBP27.09■■□□□ 1.93
GGPS1-206ENST00000488594 NME9Q86XW9 330 aa27.09■■□□□ 1.93
GGPS1-206ENST00000488594 CARD11Q9BXL7 1154 aa27.09■■□□□ 1.93
GGPS1-206ENST00000488594 IL2RBP14784 551 aa27.08■■□□□ 1.93
GGPS1-206ENST00000488594 PTGER2P43116 358 aa27.08■■□□□ 1.93
GGPS1-206ENST00000488594 CD163L1Q9NR16 1453 aa27.08■■□□□ 1.92
GGPS1-206ENST00000488594 USP54Q70EL1 1684 aa27.08■■□□□ 1.92
GGPS1-206ENST00000488594 TMC1Q8TDI8 760 aa27.07■■□□□ 1.92
GGPS1-206ENST00000488594 MTFR1LQ9H019 292 aa27.05■■□□□ 1.92
GGPS1-206ENST00000488594 EDC4Q6P2E9 1401 aaKnown RBP27.05■■□□□ 1.92
GGPS1-206ENST00000488594 NHSQ6T4R5 1651 aa27.04■■□□□ 1.92
GGPS1-206ENST00000488594 TERF2IPQ9NYB0 399 aa27.04■■□□□ 1.92
GGPS1-206ENST00000488594 ATF5Q9Y2D1 282 aaPredicted RBP27.04■■□□□ 1.92
GGPS1-206ENST00000488594 ANKRD24Q8TF21 1146 aa27.03■■□□□ 1.92
GGPS1-206ENST00000488594 PUS7Q96PZ0 661 aaKnown RBP27.03■■□□□ 1.92
GGPS1-206ENST00000488594 ACSBG1Q96GR2 724 aa27.02■■□□□ 1.92
GGPS1-206ENST00000488594 SLC12A5Q9H2X9 1139 aa27.02■■□□□ 1.92
GGPS1-206ENST00000488594 MYOM1P52179 1685 aa27■■□□□ 1.91
GGPS1-206ENST00000488594 LTN1O94822 1766 aa26.98■■□□□ 1.91
GGPS1-206ENST00000488594 SYT17Q9BSW7 474 aa26.97■■□□□ 1.91
GGPS1-206ENST00000488594 FHDC1Q9C0D6 1143 aaPredicted RBP26.97■■□□□ 1.91
GGPS1-206ENST00000488594 A0A1W2PP64 1363 aa26.97■■□□□ 1.91
GGPS1-206ENST00000488594 SGIP1Q9BQI5 828 aa26.97■■□□□ 1.91
GGPS1-206ENST00000488594 IP6K1Q92551 441 aa26.95■■□□□ 1.9
GGPS1-206ENST00000488594 PAPPAQ13219 1627 aa26.93■■□□□ 1.9
GGPS1-206ENST00000488594 TONSLQ96HA7 1378 aa26.93■■□□□ 1.9
GGPS1-206ENST00000488594 ARXQ96QS3 562 aa26.92■■□□□ 1.9
GGPS1-206ENST00000488594 SLC24A1O60721 1099 aa26.91■■□□□ 1.9
GGPS1-206ENST00000488594 BTAF1O14981 1849 aa26.9■■□□□ 1.9
GGPS1-206ENST00000488594 SLC27A3Q5K4L6 730 aa26.9■■□□□ 1.9
GGPS1-206ENST00000488594 MAP3K5Q99683 1374 aa26.9■■□□□ 1.9
GGPS1-206ENST00000488594 LRRC4BQ9NT99 713 aa26.89■■□□□ 1.9
GGPS1-206ENST00000488594 ZNF827Q17R98 1081 aa26.88■■□□□ 1.89
GGPS1-206ENST00000488594 DDX54Q8TDD1 881 aaKnown RBP26.88■■□□□ 1.89
GGPS1-206ENST00000488594 COG3Q96JB2 828 aa26.88■■□□□ 1.89
GGPS1-206ENST00000488594 FAM208AQ9UK61 1670 aaKnown RBP26.88■■□□□ 1.89
GGPS1-206ENST00000488594 LTV1Q96GA3 475 aaPredicted RBP26.87■■□□□ 1.89
GGPS1-206ENST00000488594 SLC16A10Q8TF71 515 aa26.85■■□□□ 1.89
GGPS1-206ENST00000488594 AKT1S1Q96B36 256 aa26.85■■□□□ 1.89
GGPS1-206ENST00000488594 ZNF784Q8NCA9 323 aaPredicted RBP26.84■■□□□ 1.89
GGPS1-206ENST00000488594 TESK2Q96S53 571 aa26.84■■□□□ 1.89
GGPS1-206ENST00000488594 MAP3K19Q56UN5 1328 aa26.84■■□□□ 1.89
GGPS1-206ENST00000488594 HOXC9P31274 260 aa26.84■■□□□ 1.89
GGPS1-206ENST00000488594 ANKRD36BQ8N2N9 1353 aa26.83■■□□□ 1.89
GGPS1-206ENST00000488594 AMPHP49418 695 aa26.83■■□□□ 1.88
GGPS1-206ENST00000488594 ST20-MTHFSA0A0A6YYL1 179 aa26.82■■□□□ 1.88
GGPS1-206ENST00000488594 SYTL4Q96C24 671 aaPredicted RBP26.81■■□□□ 1.88
GGPS1-206ENST00000488594 POLD1P28340 1107 aa26.8■■□□□ 1.88
GGPS1-206ENST00000488594 PRIM1P49642 420 aaKnown RBP26.8■■□□□ 1.88
GGPS1-206ENST00000488594 KAT6BQ8WYB5 2073 aa26.8■■□□□ 1.88
GGPS1-206ENST00000488594 ZCRB1Q8TBF4 217 aaKnown RBP26.79■■□□□ 1.88
GGPS1-206ENST00000488594 RTL1A6NKG5 1358 aa26.78■■□□□ 1.88
GGPS1-206ENST00000488594 TFCP2L1Q9NZI6 479 aa26.78■■□□□ 1.88
GGPS1-206ENST00000488594 PNPLA7Q6ZV29 1317 aa26.78■■□□□ 1.88
GGPS1-206ENST00000488594 UTRNP46939 3433 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms