RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-219ENST00000488535 PPP1R9BQ96SB3 815 aa16.14■□□□□ 0.17
ABCA2-219ENST00000488535 FBLN1P23142 703 aa16.14■□□□□ 0.17
ABCA2-219ENST00000488535 ATF7IPQ6VMQ6 1270 aa16.14■□□□□ 0.17
ABCA2-219ENST00000488535 MAP7D2Q96T17 732 aa16.14■□□□□ 0.17
ABCA2-219ENST00000488535 GDPD2Q9HCC8 539 aa16.14■□□□□ 0.17
ABCA2-219ENST00000488535 LMTK2Q8IWU2 1503 aa16.13■□□□□ 0.17
ABCA2-219ENST00000488535 MYOM2P54296 1465 aa16.13■□□□□ 0.17
ABCA2-219ENST00000488535 INSRP06213 1382 aa16.13■□□□□ 0.17
ABCA2-219ENST00000488535 CIZ1Q9ULV3 898 aaPredicted RBP16.13■□□□□ 0.17
ABCA2-219ENST00000488535 CABP1Q9NZU7 370 aa16.13■□□□□ 0.17
ABCA2-219ENST00000488535 CDK19Q9BWU1 502 aa16.12■□□□□ 0.17
ABCA2-219ENST00000488535 DIP2BQ9P265 1576 aa16.12■□□□□ 0.17
ABCA2-219ENST00000488535 SLC26A8Q96RN1 970 aa16.12■□□□□ 0.17
ABCA2-219ENST00000488535 NOL7Q9UMY1 257 aaKnown RBP16.12■□□□□ 0.17
ABCA2-219ENST00000488535 ADGRB3O60242 1522 aa16.11■□□□□ 0.17
ABCA2-219ENST00000488535 ZKSCAN5Q9Y2L8 839 aa16.11■□□□□ 0.17
ABCA2-219ENST00000488535 PTMSP20962 102 aa16.11■□□□□ 0.17
ABCA2-219ENST00000488535 NSFL1CQ9UNZ2 370 aaKnown RBP16.11■□□□□ 0.17
ABCA2-219ENST00000488535 SOX12O15370 315 aa16.11■□□□□ 0.17
ABCA2-219ENST00000488535 NINLQ9Y2I6 1382 aa16.1■□□□□ 0.17
ABCA2-219ENST00000488535 DTNBO60941 627 aa16.1■□□□□ 0.17
ABCA2-219ENST00000488535 RBM25P49756 843 aaKnown RBP16.1■□□□□ 0.17
ABCA2-219ENST00000488535 PPP4R3BQ5MIZ7 849 aa16.1■□□□□ 0.17
ABCA2-219ENST00000488535 BBXQ8WY36 941 aaPredicted RBP16.1■□□□□ 0.17
ABCA2-219ENST00000488535 ZMYM3Q14202 1370 aa16.1■□□□□ 0.17
ABCA2-219ENST00000488535 KIF16BQ96L93 1317 aa16.1■□□□□ 0.17
ABCA2-219ENST00000488535 SASS6Q6UVJ0 657 aa16.09■□□□□ 0.17
ABCA2-219ENST00000488535 SNX21Q969T3 373 aa16.09■□□□□ 0.17
ABCA2-219ENST00000488535 ASXL1Q8IXJ9 1541 aa16.09■□□□□ 0.17
ABCA2-219ENST00000488535 CAMSAP1Q5T5Y3 1602 aa16.09■□□□□ 0.17
ABCA2-219ENST00000488535 TTC12Q9H892 705 aaPredicted RBP16.09■□□□□ 0.17
ABCA2-219ENST00000488535 NCKAP5LQ9HCH0 1330 aa16.09■□□□□ 0.17
ABCA2-219ENST00000488535 AK9Q5TCS8 1911 aa16.09■□□□□ 0.17
ABCA2-219ENST00000488535 CSPP1Q1MSJ5 1256 aa16.09■□□□□ 0.17
ABCA2-219ENST00000488535 RICTORQ6R327 1708 aa16.08■□□□□ 0.17
ABCA2-219ENST00000488535 KIAA2012Q0VF49 1180 aa16.08■□□□□ 0.17
ABCA2-219ENST00000488535 KIF2CQ99661 725 aa16.08■□□□□ 0.16
ABCA2-219ENST00000488535 THUMPD2Q9BTF0 503 aaKnown RBP16.08■□□□□ 0.16
ABCA2-219ENST00000488535 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.08■□□□□ 0.16
ABCA2-219ENST00000488535 CCDC39Q9UFE4 941 aa16.08■□□□□ 0.16
ABCA2-219ENST00000488535 DYNC1I1O14576 645 aa16.07■□□□□ 0.16
ABCA2-219ENST00000488535 SYNMO15061 1565 aa16.07■□□□□ 0.16
ABCA2-219ENST00000488535 GPT2Q8TD30 523 aa16.07■□□□□ 0.16
ABCA2-219ENST00000488535 TERF2IPQ9NYB0 399 aa16.07■□□□□ 0.16
ABCA2-219ENST00000488535 TMEM63CQ9P1W3 806 aa16.07■□□□□ 0.16
ABCA2-219ENST00000488535 NUCB1Q02818 461 aa16.07■□□□□ 0.16
ABCA2-219ENST00000488535 C16orf71Q8IYS4 520 aaPredicted RBP16.07■□□□□ 0.16
ABCA2-219ENST00000488535 VGLL3A8MV65 326 aa16.06■□□□□ 0.16
ABCA2-219ENST00000488535 HDGFL2Q7Z4V5 671 aaPredicted RBP16.06■□□□□ 0.16
ABCA2-219ENST00000488535 WDR63Q8IWG1 891 aa16.06■□□□□ 0.16
ABCA2-219ENST00000488535 LMBRD1Q9NUN5 540 aa16.06■□□□□ 0.16
ABCA2-219ENST00000488535 IQGAP1P46940 1657 aa16.06■□□□□ 0.16
ABCA2-219ENST00000488535 SIGLEC1Q9BZZ2 1709 aa16.06■□□□□ 0.16
ABCA2-219ENST00000488535 LAMC1P11047 1609 aa16.06■□□□□ 0.16
ABCA2-219ENST00000488535 DDIT3P35638 169 aa16.06■□□□□ 0.16
ABCA2-219ENST00000488535 SMAP1Q8IYB5 467 aaPredicted RBP16.06■□□□□ 0.16
ABCA2-219ENST00000488535 USP25Q9UHP3 1055 aa16.06■□□□□ 0.16
ABCA2-219ENST00000488535 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.06■□□□□ 0.16
ABCA2-219ENST00000488535 NUCB2P80303 420 aa16.05■□□□□ 0.16
ABCA2-219ENST00000488535 HDAC1Q13547 482 aaPredicted RBP16.05■□□□□ 0.16
ABCA2-219ENST00000488535 IPO8O15397 1037 aaKnown RBP16.05■□□□□ 0.16
ABCA2-219ENST00000488535 ZNF771Q7L3S4 317 aaPredicted RBP16.04■□□□□ 0.16
ABCA2-219ENST00000488535 ARHGAP31Q2M1Z3 1444 aa16.04■□□□□ 0.16
ABCA2-219ENST00000488535 ATAD2Q6PL18 1390 aa16.04■□□□□ 0.16
ABCA2-219ENST00000488535 SPC24Q8NBT2 197 aa16.04■□□□□ 0.16
ABCA2-219ENST00000488535 CCDC94Q9BW85 323 aaPredicted RBP16.04■□□□□ 0.16
ABCA2-219ENST00000488535 RIMS2Q9UQ26 1411 aa16.03■□□□□ 0.16
ABCA2-219ENST00000488535 CDC45O75419 566 aa16.03■□□□□ 0.16
ABCA2-219ENST00000488535 ZBTB40Q9NUA8 1239 aa16.03■□□□□ 0.16
ABCA2-219ENST00000488535 GLI2P10070 1586 aa16.03■□□□□ 0.16
ABCA2-219ENST00000488535 YTHDC2Q9H6S0 1430 aaKnown RBP16.03■□□□□ 0.16
ABCA2-219ENST00000488535 SMARCA5O60264 1052 aaPredicted RBP16.02■□□□□ 0.16
ABCA2-219ENST00000488535 CGNQ9P2M7 1197 aaKnown RBP16.02■□□□□ 0.16
ABCA2-219ENST00000488535 CHMP3Q9Y3E7 222 aa16.02■□□□□ 0.16
ABCA2-219ENST00000488535 HDGFP51858 240 aaKnown RBP16.02■□□□□ 0.16
ABCA2-219ENST00000488535 BMP2KLQ5H9B9 411 aa16.02■□□□□ 0.16
ABCA2-219ENST00000488535 ZNF500O60304 480 aaPredicted RBP16.02■□□□□ 0.15
ABCA2-219ENST00000488535 ST18O60284 1047 aa16.01■□□□□ 0.15
ABCA2-219ENST00000488535 KDM5AP29375 1690 aaKnown RBP16.01■□□□□ 0.15
ABCA2-219ENST00000488535 NRXN1Q9ULB1 1477 aa16.01■□□□□ 0.15
ABCA2-219ENST00000488535 ZNF445P59923 1031 aa16.01■□□□□ 0.15
ABCA2-219ENST00000488535 FGD1P98174 961 aa16.01■□□□□ 0.15
ABCA2-219ENST00000488535 OTUD7AQ8TE49 926 aaPredicted RBP16.01■□□□□ 0.15
ABCA2-219ENST00000488535 ZBTB22O15209 634 aa16.01■□□□□ 0.15
ABCA2-219ENST00000488535 NEK4P51957 841 aa16.01■□□□□ 0.15
ABCA2-219ENST00000488535 MTERF4Q7Z6M4 381 aaKnown RBP16.01■□□□□ 0.15
ABCA2-219ENST00000488535 PPP6R1Q9UPN7 881 aa16.01■□□□□ 0.15
ABCA2-219ENST00000488535 A0A1W2PP64 1363 aa16■□□□□ 0.15
ABCA2-219ENST00000488535 NGEFQ8N5V2 710 aa16■□□□□ 0.15
ABCA2-219ENST00000488535 RBM33Q96EV2 1170 aaKnown RBP16■□□□□ 0.15
ABCA2-219ENST00000488535 NEXMIFQ5QGS0 1516 aa16■□□□□ 0.15
ABCA2-219ENST00000488535 LRSAM1Q6UWE0 723 aa16■□□□□ 0.15
ABCA2-219ENST00000488535 TSPY26PQ9H489 355 aa16■□□□□ 0.15
ABCA2-219ENST00000488535 U2AF2P26368 475 aaKnown RBP eCLIP15.99■□□□□ 0.15
ABCA2-219ENST00000488535 ATP2B3Q16720 1220 aa15.99■□□□□ 0.15
ABCA2-219ENST00000488535 TSHZ3Q63HK5 1081 aa15.99■□□□□ 0.15
ABCA2-219ENST00000488535 LARP6Q9BRS8 491 aaKnown RBP15.99■□□□□ 0.15
ABCA2-219ENST00000488535 ZRANB1Q9UGI0 708 aa15.99■□□□□ 0.15
ABCA2-219ENST00000488535 TNRQ92752 1358 aa15.99■□□□□ 0.15
ABCA2-219ENST00000488535 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms