RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 SMTNL1A8MU46 457 aa9.77□□□□□ -0.85
MCF2L2-212ENST00000488149 CCT4P50991 539 aaKnown RBP9.77□□□□□ -0.85
MCF2L2-212ENST00000488149 SLFN5Q08AF3 891 aa9.77□□□□□ -0.85
MCF2L2-212ENST00000488149 ODF2Q5BJF6 829 aa9.77□□□□□ -0.85
MCF2L2-212ENST00000488149 TSR2Q969E8 191 aaKnown RBP9.77□□□□□ -0.85
MCF2L2-212ENST00000488149 TBC1D2Q9BYX2 928 aa9.77□□□□□ -0.85
MCF2L2-212ENST00000488149 CCDC181Q5TID7 509 aa9.76□□□□□ -0.85
MCF2L2-212ENST00000488149 NBPF8Q3BBV2 869 aa9.76□□□□□ -0.85
MCF2L2-212ENST00000488149 RIC3Q7Z5B4 369 aa9.76□□□□□ -0.85
MCF2L2-212ENST00000488149 TCEAL9Q9UHQ7 104 aa9.76□□□□□ -0.85
MCF2L2-212ENST00000488149 PRIMPOLQ96LW4 560 aa9.76□□□□□ -0.85
MCF2L2-212ENST00000488149 IGF1RP08069 1367 aa9.76□□□□□ -0.85
MCF2L2-212ENST00000488149 HFM1A2PYH4 1435 aa9.76□□□□□ -0.85
MCF2L2-212ENST00000488149 PRKAR2BP31323 418 aa9.76□□□□□ -0.85
MCF2L2-212ENST00000488149 ZRSR2Q15696 482 aaKnown RBP9.76□□□□□ -0.85
MCF2L2-212ENST00000488149 TNPO1Q92973 898 aaKnown RBP9.76□□□□□ -0.85
MCF2L2-212ENST00000488149 PLCD4Q9BRC7 762 aa9.76□□□□□ -0.85
MCF2L2-212ENST00000488149 SFPQP23246 707 aaKnown RBP eCLIP9.75□□□□□ -0.85
MCF2L2-212ENST00000488149 WWC1Q8IX03 1113 aa9.75□□□□□ -0.85
MCF2L2-212ENST00000488149 ZNF644Q9H582 1327 aaPredicted RBP9.75□□□□□ -0.85
MCF2L2-212ENST00000488149 BLOC1S2Q6QNY1 142 aa9.75□□□□□ -0.85
MCF2L2-212ENST00000488149 VPS37DQ86XT2 251 aa9.75□□□□□ -0.85
MCF2L2-212ENST00000488149 PLEKHH1Q9ULM0 1364 aa9.75□□□□□ -0.85
MCF2L2-212ENST00000488149 KIAA1107Q9UPP5 1409 aa9.75□□□□□ -0.85
MCF2L2-212ENST00000488149 ZSCAN12O43309 604 aa9.74□□□□□ -0.85
MCF2L2-212ENST00000488149 MAPK8IP2Q13387 824 aaPredicted RBP9.74□□□□□ -0.85
MCF2L2-212ENST00000488149 PPP4R3BQ5MIZ7 849 aa9.74□□□□□ -0.85
MCF2L2-212ENST00000488149 GIMAP7Q8NHV1 300 aa9.74□□□□□ -0.85
MCF2L2-212ENST00000488149 FAM107BQ9H098 131 aa9.74□□□□□ -0.85
MCF2L2-212ENST00000488149 STIM1Q13586 685 aa9.74□□□□□ -0.85
MCF2L2-212ENST00000488149 PDRG1Q9NUG6 133 aa9.74□□□□□ -0.85
MCF2L2-212ENST00000488149 ARAP1Q96P48 1450 aa9.74□□□□□ -0.85
MCF2L2-212ENST00000488149 ATAD2BQ9ULI0 1458 aa9.74□□□□□ -0.85
MCF2L2-212ENST00000488149 C11orf95C9JLR9 678 aaPredicted RBP9.74□□□□□ -0.85
MCF2L2-212ENST00000488149 NEMFO60524 1076 aa9.74□□□□□ -0.85
MCF2L2-212ENST00000488149 CRACR2AQ9BSW2 395 aa9.74□□□□□ -0.85
MCF2L2-212ENST00000488149 INCENPQ9NQS7 918 aa9.74□□□□□ -0.85
MCF2L2-212ENST00000488149 ZHX1Q9UKY1 873 aaPredicted RBP9.74□□□□□ -0.85
MCF2L2-212ENST00000488149 ATP2B1P20020 1258 aa9.74□□□□□ -0.85
MCF2L2-212ENST00000488149 RPAP2Q8IXW5 612 aaPredicted RBP9.74□□□□□ -0.85
MCF2L2-212ENST00000488149 GAS2L2Q8NHY3 880 aa9.74□□□□□ -0.85
MCF2L2-212ENST00000488149 SHTN1A0MZ66 631 aa9.73□□□□□ -0.85
MCF2L2-212ENST00000488149 TNNT1P13805 278 aa9.73□□□□□ -0.85
MCF2L2-212ENST00000488149 STK3Q13188 491 aa9.73□□□□□ -0.85
MCF2L2-212ENST00000488149 MAP9Q49MG5 647 aa9.73□□□□□ -0.85
MCF2L2-212ENST00000488149 ARHGAP29Q52LW3 1261 aa9.73□□□□□ -0.85
MCF2L2-212ENST00000488149 KRT32Q14532 448 aa9.73□□□□□ -0.85
MCF2L2-212ENST00000488149 CCDC43Q96MW1 224 aaKnown RBP9.73□□□□□ -0.85
MCF2L2-212ENST00000488149 CABP2Q9NPB3 220 aa9.73□□□□□ -0.85
MCF2L2-212ENST00000488149 EPB41L2O43491 1005 aaKnown RBP9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 MCM3P25205 808 aa9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 FAM193AP78312 1265 aa9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 SCAND2PQ9GZW5 306 aaPredicted RBP9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 ERBINQ96RT1 1412 aa9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 NKTRP30414 1462 aaKnown RBP9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 KLHL40Q2TBA0 621 aa9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 DNAJC2Q99543 621 aaKnown RBP9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 TBC1D2BQ9UPU7 963 aa9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 SLC4A2P04920 1241 aa9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 SSFA2P28290 1259 aa9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 CENPHQ9H3R5 247 aa9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 JAKMIP1Q96N16 626 aaKnown RBP9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 CFAP100Q494V2 611 aa9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 CCDC148Q8NFR7 591 aa9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 ANO10Q9NW15 660 aa9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 AIMP1Q12904 312 aaKnown RBP9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 USP25Q9UHP3 1055 aa9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 LRRFIP2Q9Y608 721 aaKnown RBP9.72□□□□□ -0.85
MCF2L2-212ENST00000488149 NBPF1Q3BBV0 1214 aa9.71□□□□□ -0.85
MCF2L2-212ENST00000488149 TRIM22Q8IYM9 498 aa9.71□□□□□ -0.85
MCF2L2-212ENST00000488149 POLA1P09884 1462 aaPredicted RBP9.71□□□□□ -0.85
MCF2L2-212ENST00000488149 UVSSAQ2YD98 709 aa9.71□□□□□ -0.85
MCF2L2-212ENST00000488149 ZFYVE27Q5T4F4 411 aa9.71□□□□□ -0.85
MCF2L2-212ENST00000488149 TIGD1Q96MW7 591 aa9.71□□□□□ -0.85
MCF2L2-212ENST00000488149 PRDM2Q13029 1718 aa9.71□□□□□ -0.85
MCF2L2-212ENST00000488149 TRIM34Q9BYJ4 488 aa9.71□□□□□ -0.85
MCF2L2-212ENST00000488149 CLIP2Q9UDT6 1046 aa9.71□□□□□ -0.86
MCF2L2-212ENST00000488149 PTPRGP23470 1445 aa9.71□□□□□ -0.86
MCF2L2-212ENST00000488149 TMEM57Q8N5G2 664 aa9.71□□□□□ -0.86
MCF2L2-212ENST00000488149 RAD21O60216 631 aa9.71□□□□□ -0.86
MCF2L2-212ENST00000488149 CCAR1Q8IX12 1150 aaKnown RBP9.71□□□□□ -0.86
MCF2L2-212ENST00000488149 C16orf45Q96MC5 204 aaPredicted RBP9.71□□□□□ -0.86
MCF2L2-212ENST00000488149 DHX29Q7Z478 1369 aaKnown RBP9.71□□□□□ -0.86
MCF2L2-212ENST00000488149 URI1O94763 535 aaPredicted RBP9.7□□□□□ -0.86
MCF2L2-212ENST00000488149 CDK5RAP3Q96JB5 506 aa9.7□□□□□ -0.86
MCF2L2-212ENST00000488149 PAXBP1Q9Y5B6 917 aa9.7□□□□□ -0.86
MCF2L2-212ENST00000488149 CDKL5O76039 1030 aa9.7□□□□□ -0.86
MCF2L2-212ENST00000488149 C20orf194Q5TEA3 1177 aa9.7□□□□□ -0.86
MCF2L2-212ENST00000488149 JAKMIP3Q5VZ66 844 aa9.7□□□□□ -0.86
MCF2L2-212ENST00000488149 BMS1Q14692 1282 aaKnown RBP9.7□□□□□ -0.86
MCF2L2-212ENST00000488149 DDX11Q96FC9 970 aa9.7□□□□□ -0.86
MCF2L2-212ENST00000488149 TBC1D32Q96NH3 1257 aa9.7□□□□□ -0.86
MCF2L2-212ENST00000488149 CFTRP13569 1480 aa9.7□□□□□ -0.86
MCF2L2-212ENST00000488149 CTAGE5O15320 804 aa9.7□□□□□ -0.86
MCF2L2-212ENST00000488149 LRPPRCP42704 1394 aaKnown RBP9.7□□□□□ -0.86
MCF2L2-212ENST00000488149 CASQ1P31415 396 aa9.7□□□□□ -0.86
MCF2L2-212ENST00000488149 GSDMDP57764 484 aa9.7□□□□□ -0.86
MCF2L2-212ENST00000488149 CAMK4Q16566 473 aa9.7□□□□□ -0.86
MCF2L2-212ENST00000488149 NEFHP12036 1026 aa9.7□□□□□ -0.86
MCF2L2-212ENST00000488149 KIF5CO60282 957 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms