RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 MORN1Q5T089 497 aa10.15□□□□□ -0.78
TNFSF4-203ENST00000488053 MTUS2Q5JR59 1369 aa10.14□□□□□ -0.79
TNFSF4-203ENST00000488053 CCNB3Q8WWL7 1395 aa10.14□□□□□ -0.79
TNFSF4-203ENST00000488053 ATP7AQ04656 1500 aa10.14□□□□□ -0.79
TNFSF4-203ENST00000488053 SPTLC1O15269 473 aa10.14□□□□□ -0.79
TNFSF4-203ENST00000488053 CLK2P49760 499 aaKnown RBP10.14□□□□□ -0.79
TNFSF4-203ENST00000488053 RSBN1LQ6PCB5 846 aaPredicted RBP10.14□□□□□ -0.79
TNFSF4-203ENST00000488053 RIC3Q7Z5B4 369 aa10.14□□□□□ -0.79
TNFSF4-203ENST00000488053 CFDP1Q9UEE9 299 aaPredicted RBP10.14□□□□□ -0.79
TNFSF4-203ENST00000488053 CLTCQ00610 1675 aaKnown RBP10.13□□□□□ -0.79
TNFSF4-203ENST00000488053 FDX1P10109 184 aa10.13□□□□□ -0.79
TNFSF4-203ENST00000488053 PUS10Q3MIT2 529 aaKnown RBP10.13□□□□□ -0.79
TNFSF4-203ENST00000488053 PCMTD1Q96MG8 357 aaPredicted RBP10.13□□□□□ -0.79
TNFSF4-203ENST00000488053 TUSC1Q2TAM9 212 aa10.12□□□□□ -0.79
TNFSF4-203ENST00000488053 Q3C1V9 767 aa10.12□□□□□ -0.79
TNFSF4-203ENST00000488053 BLOC1S3Q6QNY0 202 aa10.12□□□□□ -0.79
TNFSF4-203ENST00000488053 POLR3EQ9NVU0 708 aa10.12□□□□□ -0.79
TNFSF4-203ENST00000488053 CNTLNQ9NXG0 1405 aa10.12□□□□□ -0.79
TNFSF4-203ENST00000488053 INO80Q9ULG1 1556 aaPredicted RBP10.12□□□□□ -0.79
TNFSF4-203ENST00000488053 ZNF644Q9H582 1327 aaPredicted RBP10.11□□□□□ -0.79
TNFSF4-203ENST00000488053 TIAM1Q13009 1591 aa10.11□□□□□ -0.79
TNFSF4-203ENST00000488053 NDUFV2P19404 249 aa10.11□□□□□ -0.79
TNFSF4-203ENST00000488053 MTRQ99707 1265 aa10.11□□□□□ -0.79
TNFSF4-203ENST00000488053 MROH2AA6NES4 1674 aa10.11□□□□□ -0.79
TNFSF4-203ENST00000488053 PLEKHH2Q8IVE3 1493 aa10.1□□□□□ -0.79
TNFSF4-203ENST00000488053 KIAA1107Q9UPP5 1409 aa10.1□□□□□ -0.79
TNFSF4-203ENST00000488053 COPS2P61201 443 aa10.1□□□□□ -0.79
TNFSF4-203ENST00000488053 GGT6Q6P531 493 aa10.1□□□□□ -0.79
TNFSF4-203ENST00000488053 HLA-CQ95604 372 aa10.1□□□□□ -0.79
TNFSF4-203ENST00000488053 IL21Q9HBE4 155 aa10.1□□□□□ -0.79
TNFSF4-203ENST00000488053 LIMD1Q9UGP4 676 aa10.1□□□□□ -0.79
TNFSF4-203ENST00000488053 SLC27A5Q9Y2P5 690 aa10.1□□□□□ -0.79
TNFSF4-203ENST00000488053 EHBP1L1Q8N3D4 1523 aa10.1□□□□□ -0.79
TNFSF4-203ENST00000488053 ZMYM3Q14202 1370 aa10.1□□□□□ -0.79
TNFSF4-203ENST00000488053 A2MP01023 1474 aa10.1□□□□□ -0.79
TNFSF4-203ENST00000488053 PLXNC1O60486 1568 aa10.09□□□□□ -0.79
TNFSF4-203ENST00000488053 CEP162Q5TB80 1403 aa10.09□□□□□ -0.79
TNFSF4-203ENST00000488053 CAMSAP1Q5T5Y3 1602 aa10.09□□□□□ -0.79
TNFSF4-203ENST00000488053 GUCA2AQ02747 115 aa10.09□□□□□ -0.79
TNFSF4-203ENST00000488053 TJAP1Q5JTD0 557 aa10.09□□□□□ -0.79
TNFSF4-203ENST00000488053 SCUBE3Q8IX30 993 aa10.09□□□□□ -0.79
TNFSF4-203ENST00000488053 SALL2Q9Y467 1007 aaPredicted RBP10.09□□□□□ -0.79
TNFSF4-203ENST00000488053 ADGBQ8N7X0 1667 aa10.09□□□□□ -0.79
TNFSF4-203ENST00000488053 PTPRTO14522 1441 aa10.08□□□□□ -0.8
TNFSF4-203ENST00000488053 NCOA1Q15788 1441 aa10.07□□□□□ -0.8
TNFSF4-203ENST00000488053 ZPR1O75312 459 aa10.07□□□□□ -0.8
TNFSF4-203ENST00000488053 PRPF38BQ5VTL8 546 aaKnown RBP10.07□□□□□ -0.8
TNFSF4-203ENST00000488053 PCDHGC3Q9UN70 934 aa10.07□□□□□ -0.8
TNFSF4-203ENST00000488053 MYO3AQ8NEV4 1616 aa10.07□□□□□ -0.8
TNFSF4-203ENST00000488053 NPATQ14207 1427 aa10.07□□□□□ -0.8
TNFSF4-203ENST00000488053 ITGBL1O95965 494 aaPredicted RBP10.06□□□□□ -0.8
TNFSF4-203ENST00000488053 ZBTB3Q9H5J0 574 aa10.06□□□□□ -0.8
TNFSF4-203ENST00000488053 PCDHB15Q9Y5E8 787 aa10.06□□□□□ -0.8
TNFSF4-203ENST00000488053 LTBP4Q8N2S1 1624 aa10.06□□□□□ -0.8
TNFSF4-203ENST00000488053 MBD5Q9P267 1494 aa10.05□□□□□ -0.8
TNFSF4-203ENST00000488053 SPDYE5A6NIY4 337 aa10.05□□□□□ -0.8
TNFSF4-203ENST00000488053 FMNL1O95466 1100 aaPredicted RBP10.05□□□□□ -0.8
TNFSF4-203ENST00000488053 CSPP1Q1MSJ5 1256 aa10.05□□□□□ -0.8
TNFSF4-203ENST00000488053 PROCA1Q8NCQ7 364 aaPredicted RBP10.05□□□□□ -0.8
TNFSF4-203ENST00000488053 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.05□□□□□ -0.8
TNFSF4-203ENST00000488053 ZNF142P52746 1687 aaPredicted RBP10.05□□□□□ -0.8
TNFSF4-203ENST00000488053 CEP170BQ9Y4F5 1589 aaPredicted RBP10.05□□□□□ -0.8
TNFSF4-203ENST00000488053 NCOA2Q15596 1464 aa10.04□□□□□ -0.8
TNFSF4-203ENST00000488053 C6orf229H3BNL8 230 aa10.04□□□□□ -0.8
TNFSF4-203ENST00000488053 KCNC4Q03721 635 aa10.04□□□□□ -0.8
TNFSF4-203ENST00000488053 MTMR2Q13614 643 aa10.04□□□□□ -0.8
TNFSF4-203ENST00000488053 BRICD5Q6PL45 260 aa10.04□□□□□ -0.8
TNFSF4-203ENST00000488053 PTPRKQ15262 1439 aa10.04□□□□□ -0.8
TNFSF4-203ENST00000488053 CAMSAP2Q08AD1 1489 aa10.04□□□□□ -0.8
TNFSF4-203ENST00000488053 LILRB3O75022 631 aa10.03□□□□□ -0.8
TNFSF4-203ENST00000488053 THAP11Q96EK4 314 aa10.03□□□□□ -0.8
TNFSF4-203ENST00000488053 DISP3Q9P2K9 1392 aa10.02□□□□□ -0.8
TNFSF4-203ENST00000488053 LOC105371045A0A1W2PR82 267 aa10.02□□□□□ -0.81
TNFSF4-203ENST00000488053 NUTM2BA6NNL0 878 aaPredicted RBP10.02□□□□□ -0.81
TNFSF4-203ENST00000488053 NUTM2EB1AL46 878 aaPredicted RBP10.02□□□□□ -0.81
TNFSF4-203ENST00000488053 KIF3BO15066 747 aa10.02□□□□□ -0.81
TNFSF4-203ENST00000488053 QPCTQ16769 361 aa10.02□□□□□ -0.81
TNFSF4-203ENST00000488053 NUTM2DQ5VT03 806 aaPredicted RBP10.02□□□□□ -0.81
TNFSF4-203ENST00000488053 RNF19BQ6ZMZ0 732 aa10.02□□□□□ -0.81
TNFSF4-203ENST00000488053 RETREG3Q86VR2 466 aa10.02□□□□□ -0.81
TNFSF4-203ENST00000488053 NUTM2AQ8IVF1 878 aaPredicted RBP10.02□□□□□ -0.81
TNFSF4-203ENST00000488053 ZNF516Q92618 1163 aa10.02□□□□□ -0.81
TNFSF4-203ENST00000488053 SPSB2Q99619 263 aa10.02□□□□□ -0.81
TNFSF4-203ENST00000488053 PLSCR2Q9NRY7 297 aa10.02□□□□□ -0.81
TNFSF4-203ENST00000488053 CCDC141Q6ZP82 1450 aa10.02□□□□□ -0.81
TNFSF4-203ENST00000488053 ZNF335Q9H4Z2 1342 aaPredicted RBP10.02□□□□□ -0.81
TNFSF4-203ENST00000488053 DHX29Q7Z478 1369 aaKnown RBP10.01□□□□□ -0.81
TNFSF4-203ENST00000488053 RTEL1-TNFRSF6BF6WH68 1400 aa10.01□□□□□ -0.81
TNFSF4-203ENST00000488053 ADH1BP00325 375 aa10.01□□□□□ -0.81
TNFSF4-203ENST00000488053 HRCP23327 699 aa10.01□□□□□ -0.81
TNFSF4-203ENST00000488053 FBXO31Q5XUX0 539 aaPredicted RBP10.01□□□□□ -0.81
TNFSF4-203ENST00000488053 PPP2R2DQ66LE6 453 aa10.01□□□□□ -0.81
TNFSF4-203ENST00000488053 CABLES1Q8TDN4 633 aa10.01□□□□□ -0.81
TNFSF4-203ENST00000488053 USB1Q9BQ65 265 aaKnown RBP10.01□□□□□ -0.81
TNFSF4-203ENST00000488053 TLL1O43897 1013 aa10□□□□□ -0.81
TNFSF4-203ENST00000488053 DNMT1P26358 1616 aaKnown RBP10□□□□□ -0.81
TNFSF4-203ENST00000488053 PLA2R1Q13018 1463 aa9.99□□□□□ -0.81
TNFSF4-203ENST00000488053 SYMPKQ92797 1274 aaKnown RBP9.99□□□□□ -0.81
TNFSF4-203ENST00000488053 A2ML1A8K2U0 1454 aa9.98□□□□□ -0.81
TNFSF4-203ENST00000488053 TCOF1Q13428 1488 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms