RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 DNMT1P26358 1616 aaKnown RBP10.04□□□□□ -0.8
SEC22C-215ENST00000487701 AGLP35573 1532 aa10.03□□□□□ -0.8
SEC22C-215ENST00000487701 SCUBE3Q8IX30 993 aa10.03□□□□□ -0.8
SEC22C-215ENST00000487701 REPIN1Q9BWE0 567 aaKnown RBP10.03□□□□□ -0.8
SEC22C-215ENST00000487701 PRKD2Q9BZL6 878 aa10.03□□□□□ -0.8
SEC22C-215ENST00000487701 SLC24A3Q9HC58 644 aa10.03□□□□□ -0.8
SEC22C-215ENST00000487701 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.03□□□□□ -0.8
SEC22C-215ENST00000487701 TRIM66O15016 1216 aa10.02□□□□□ -0.81
SEC22C-215ENST00000487701 KDM4AO75164 1064 aa10.02□□□□□ -0.81
SEC22C-215ENST00000487701 GRIPAP1Q4V328 841 aa10.02□□□□□ -0.81
SEC22C-215ENST00000487701 MORN1Q5T089 497 aa10.02□□□□□ -0.81
SEC22C-215ENST00000487701 ARID4BQ4LE39 1312 aaPredicted RBP10.02□□□□□ -0.81
SEC22C-215ENST00000487701 RTEL1-TNFRSF6BF6WH68 1400 aa10.01□□□□□ -0.81
SEC22C-215ENST00000487701 LAPTM4AQ15012 233 aa10.01□□□□□ -0.81
SEC22C-215ENST00000487701 Q6ZNB5 142 aa10.01□□□□□ -0.81
SEC22C-215ENST00000487701 TMUB1Q9BVT8 246 aa10.01□□□□□ -0.81
SEC22C-215ENST00000487701 A2MP01023 1474 aa10□□□□□ -0.81
SEC22C-215ENST00000487701 PTPRMP28827 1452 aa10□□□□□ -0.81
SEC22C-215ENST00000487701 ADH1BP00325 375 aa10□□□□□ -0.81
SEC22C-215ENST00000487701 SSTR3P32745 418 aaPredicted RBP10□□□□□ -0.81
SEC22C-215ENST00000487701 GIGYF2Q6Y7W6 1299 aaKnown RBP10□□□□□ -0.81
SEC22C-215ENST00000487701 SHANK2Q9UPX8 1470 aa9.99□□□□□ -0.81
SEC22C-215ENST00000487701 PPARGC1BQ86YN6 1023 aaKnown RBP9.99□□□□□ -0.81
SEC22C-215ENST00000487701 SPSB2Q99619 263 aa9.99□□□□□ -0.81
SEC22C-215ENST00000487701 SLC27A5Q9Y2P5 690 aa9.99□□□□□ -0.81
SEC22C-215ENST00000487701 V9GY48 417 aaPredicted RBP9.99□□□□□ -0.81
SEC22C-215ENST00000487701 C3P01024 1663 aa9.99□□□□□ -0.81
SEC22C-215ENST00000487701 ABCC5O15440 1437 aa9.99□□□□□ -0.81
SEC22C-215ENST00000487701 GFRA3O60609 400 aa9.98□□□□□ -0.81
SEC22C-215ENST00000487701 S1PR4O95977 384 aa9.98□□□□□ -0.81
SEC22C-215ENST00000487701 MLECQ14165 292 aa9.98□□□□□ -0.81
SEC22C-215ENST00000487701 NUTM1Q86Y26 1132 aa9.98□□□□□ -0.81
SEC22C-215ENST00000487701 PARP9Q8IXQ6 854 aa9.98□□□□□ -0.81
SEC22C-215ENST00000487701 MROH2AA6NES4 1674 aa9.98□□□□□ -0.81
SEC22C-215ENST00000487701 CLTCQ00610 1675 aaKnown RBP9.98□□□□□ -0.81
SEC22C-215ENST00000487701 DAPK1P53355 1430 aa9.98□□□□□ -0.81
SEC22C-215ENST00000487701 USP46P62068 366 aa9.97□□□□□ -0.81
SEC22C-215ENST00000487701 RNF17Q9BXT8 1623 aaKnown RBP9.96□□□□□ -0.81
SEC22C-215ENST00000487701 EIF2AK4Q9P2K8 1649 aaKnown RBP9.96□□□□□ -0.81
SEC22C-215ENST00000487701 FMNL1O95466 1100 aaPredicted RBP9.96□□□□□ -0.82
SEC22C-215ENST00000487701 SLC6A16Q9GZN6 736 aa9.96□□□□□ -0.82
SEC22C-215ENST00000487701 HOXA2O43364 376 aa9.95□□□□□ -0.82
SEC22C-215ENST00000487701 PDE4DQ08499 809 aa9.95□□□□□ -0.82
SEC22C-215ENST00000487701 MROH1Q8NDA8 1641 aa9.95□□□□□ -0.82
SEC22C-215ENST00000487701 SETD1BQ9UPS6 1966 aaKnown RBP9.95□□□□□ -0.82
SEC22C-215ENST00000487701 DHX29Q7Z478 1369 aaKnown RBP9.94□□□□□ -0.82
SEC22C-215ENST00000487701 RNF223E7ERA6 249 aa9.94□□□□□ -0.82
SEC22C-215ENST00000487701 RNF19BQ6ZMZ0 732 aa9.94□□□□□ -0.82
SEC22C-215ENST00000487701 HLA-CQ95604 372 aa9.94□□□□□ -0.82
SEC22C-215ENST00000487701 BEGAINQ9BUH8 593 aa9.94□□□□□ -0.82
SEC22C-215ENST00000487701 CEP152O94986 1710 aa9.93□□□□□ -0.82
SEC22C-215ENST00000487701 PREX1Q8TCU6 1659 aa9.93□□□□□ -0.82
SEC22C-215ENST00000487701 DUOX2Q9NRD8 1548 aa9.93□□□□□ -0.82
SEC22C-215ENST00000487701 PPEF1O14829 653 aaPredicted RBP9.93□□□□□ -0.82
SEC22C-215ENST00000487701 TSPY4P0CV99 314 aa9.93□□□□□ -0.82
SEC22C-215ENST00000487701 TSPY10P0CW01 314 aa9.93□□□□□ -0.82
SEC22C-215ENST00000487701 Q3C1V9 767 aa9.93□□□□□ -0.82
SEC22C-215ENST00000487701 THAP11Q96EK4 314 aa9.93□□□□□ -0.82
SEC22C-215ENST00000487701 DEPDC5O75140 1603 aa9.93□□□□□ -0.82
SEC22C-215ENST00000487701 ADGRL2O95490 1459 aa9.92□□□□□ -0.82
SEC22C-215ENST00000487701 PTPRKQ15262 1439 aa9.92□□□□□ -0.82
SEC22C-215ENST00000487701 CFAP65Q6ZU64 1925 aaKnown RBP9.92□□□□□ -0.82
SEC22C-215ENST00000487701 GUCA2AQ02747 115 aa9.92□□□□□ -0.82
SEC22C-215ENST00000487701 KIF15Q9NS87 1388 aa9.91□□□□□ -0.82
SEC22C-215ENST00000487701 ZC3H13Q5T200 1668 aaKnown RBP9.91□□□□□ -0.82
SEC22C-215ENST00000487701 NRG2O14511 850 aaPredicted RBP9.91□□□□□ -0.82
SEC22C-215ENST00000487701 LCE2BO14633 110 aa9.91□□□□□ -0.82
SEC22C-215ENST00000487701 FAM50AQ14320 339 aaKnown RBP9.91□□□□□ -0.82
SEC22C-215ENST00000487701 RRBP1Q9P2E9 1410 aaKnown RBP9.9□□□□□ -0.82
SEC22C-215ENST00000487701 MS4A1P11836 297 aa9.9□□□□□ -0.82
SEC22C-215ENST00000487701 BRICD5Q6PL45 260 aa9.9□□□□□ -0.82
SEC22C-215ENST00000487701 SPIRE2Q8WWL2 714 aa9.9□□□□□ -0.82
SEC22C-215ENST00000487701 SALL2Q9Y467 1007 aaPredicted RBP9.9□□□□□ -0.82
SEC22C-215ENST00000487701 PRDM15P57071 1507 aaPredicted RBP9.9□□□□□ -0.82
SEC22C-215ENST00000487701 KDM5DQ9BY66 1539 aa9.9□□□□□ -0.82
SEC22C-215ENST00000487701 FAM135AQ9P2D6 1515 aa9.9□□□□□ -0.82
SEC22C-215ENST00000487701 LMTK3Q96Q04 1460 aa9.9□□□□□ -0.83
SEC22C-215ENST00000487701 NCOA1Q15788 1441 aa9.9□□□□□ -0.83
SEC22C-215ENST00000487701 CNTLNQ9NXG0 1405 aa9.9□□□□□ -0.83
SEC22C-215ENST00000487701 TRAF7Q6Q0C0 670 aa9.89□□□□□ -0.83
SEC22C-215ENST00000487701 ANKLE1Q8NAG6 615 aa9.89□□□□□ -0.83
SEC22C-215ENST00000487701 PRDM9Q9NQV7 894 aa9.89□□□□□ -0.83
SEC22C-215ENST00000487701 ERBINQ96RT1 1412 aa9.89□□□□□ -0.83
SEC22C-215ENST00000487701 CAMSAP1Q5T5Y3 1602 aa9.89□□□□□ -0.83
SEC22C-215ENST00000487701 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.88□□□□□ -0.83
SEC22C-215ENST00000487701 ABCC3O15438 1527 aa9.88□□□□□ -0.83
SEC22C-215ENST00000487701 KIF3BO15066 747 aa9.88□□□□□ -0.83
SEC22C-215ENST00000487701 FDX1P10109 184 aa9.88□□□□□ -0.83
SEC22C-215ENST00000487701 CEBPAP49715 358 aaPredicted RBP9.88□□□□□ -0.83
SEC22C-215ENST00000487701 GGT6Q6P531 493 aa9.88□□□□□ -0.83
SEC22C-215ENST00000487701 CHIC2Q9UKJ5 165 aa9.88□□□□□ -0.83
SEC22C-215ENST00000487701 ANKRD30AQ9BXX3 1397 aa9.88□□□□□ -0.83
SEC22C-215ENST00000487701 MYO3AQ8NEV4 1616 aa9.87□□□□□ -0.83
SEC22C-215ENST00000487701 FAM160A2Q8N612 972 aaPredicted RBP9.87□□□□□ -0.83
SEC22C-215ENST00000487701 RRP7BPQ9NSQ0 103 aa9.87□□□□□ -0.83
SEC22C-215ENST00000487701 ZNF142P52746 1687 aaPredicted RBP9.87□□□□□ -0.83
SEC22C-215ENST00000487701 GCC2Q8IWJ2 1684 aa9.87□□□□□ -0.83
SEC22C-215ENST00000487701 MOXD2PA6NHM9 499 aa9.86□□□□□ -0.83
SEC22C-215ENST00000487701 NDUFV2P19404 249 aa9.86□□□□□ -0.83
SEC22C-215ENST00000487701 MSS51Q4VC12 460 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms