RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 RTL1A6NKG5 1358 aa17.34■□□□□ 0.37
PRDM2-208ENST00000487453 PPM1GO15355 546 aaPredicted RBP17.34■□□□□ 0.37
PRDM2-208ENST00000487453 COL5A2P05997 1499 aaPredicted RBP17.34■□□□□ 0.37
PRDM2-208ENST00000487453 AMPHP49418 695 aa17.34■□□□□ 0.37
PRDM2-208ENST00000487453 BCL9LQ86UU0 1499 aa17.33■□□□□ 0.37
PRDM2-208ENST00000487453 FNBP4Q8N3X1 1017 aaPredicted RBP17.33■□□□□ 0.36
PRDM2-208ENST00000487453 STRN4Q9NRL3 753 aa17.33■□□□□ 0.36
PRDM2-208ENST00000487453 EMILIN1Q9Y6C2 1016 aa17.33■□□□□ 0.36
PRDM2-208ENST00000487453 FAM208AQ9UK61 1670 aaKnown RBP17.32■□□□□ 0.36
PRDM2-208ENST00000487453 BLMP54132 1417 aaPredicted RBP17.32■□□□□ 0.36
PRDM2-208ENST00000487453 ZNF772Q68DY9 489 aaPredicted RBP17.32■□□□□ 0.36
PRDM2-208ENST00000487453 SMG6Q86US8 1419 aaKnown RBP17.31■□□□□ 0.36
PRDM2-208ENST00000487453 FLT4P35916 1363 aa17.31■□□□□ 0.36
PRDM2-208ENST00000487453 KIF24Q5T7B8 1368 aa17.3■□□□□ 0.36
PRDM2-208ENST00000487453 HOXC9P31274 260 aa17.3■□□□□ 0.36
PRDM2-208ENST00000487453 EVA1CP58658 441 aa17.3■□□□□ 0.36
PRDM2-208ENST00000487453 UNC5CLQ8IV45 518 aa17.3■□□□□ 0.36
PRDM2-208ENST00000487453 AXIN2Q9Y2T1 843 aa17.3■□□□□ 0.36
PRDM2-208ENST00000487453 CCDC9Q9Y3X0 531 aaKnown RBP17.3■□□□□ 0.36
PRDM2-208ENST00000487453 CDK12Q9NYV4 1490 aaPredicted RBP17.3■□□□□ 0.36
PRDM2-208ENST00000487453 PARD3Q8TEW0 1356 aa17.29■□□□□ 0.36
PRDM2-208ENST00000487453 IP6K1Q92551 441 aa17.29■□□□□ 0.36
PRDM2-208ENST00000487453 POLKQ9UBT6 870 aa17.29■□□□□ 0.36
PRDM2-208ENST00000487453 CSB-PGBD3P0DP91 1061 aa17.28■□□□□ 0.36
PRDM2-208ENST00000487453 ATRNO75882 1429 aa17.28■□□□□ 0.36
PRDM2-208ENST00000487453 LTV1Q96GA3 475 aaPredicted RBP17.27■□□□□ 0.36
PRDM2-208ENST00000487453 RGS17Q9UGC6 210 aaPredicted RBP17.27■□□□□ 0.36
PRDM2-208ENST00000487453 TRPC5Q9UL62 973 aaPredicted RBP17.27■□□□□ 0.36
PRDM2-208ENST00000487453 GLI3P10071 1580 aa17.27■□□□□ 0.35
PRDM2-208ENST00000487453 ERBB3P21860 1342 aa17.26■□□□□ 0.35
PRDM2-208ENST00000487453 RGPD2P0DJD1 1756 aa17.26■□□□□ 0.35
PRDM2-208ENST00000487453 ANKRD24Q8TF21 1146 aa17.26■□□□□ 0.35
PRDM2-208ENST00000487453 CRB1P82279 1406 aa17.26■□□□□ 0.35
PRDM2-208ENST00000487453 INSRP06213 1382 aa17.26■□□□□ 0.35
PRDM2-208ENST00000487453 WNK3Q9BYP7 1800 aa17.26■□□□□ 0.35
PRDM2-208ENST00000487453 WDR17Q8IZU2 1322 aa17.25■□□□□ 0.35
PRDM2-208ENST00000487453 HSP90AB2PQ58FF8 381 aa17.25■□□□□ 0.35
PRDM2-208ENST00000487453 LARP1Q6PKG0 1096 aaKnown RBP17.25■□□□□ 0.35
PRDM2-208ENST00000487453 TOM1L2Q6ZVM7 507 aa17.25■□□□□ 0.35
PRDM2-208ENST00000487453 QTRT2Q9H974 415 aaKnown RBP17.25■□□□□ 0.35
PRDM2-208ENST00000487453 PPP2R1AP30153 589 aa17.24■□□□□ 0.35
PRDM2-208ENST00000487453 MTHFSP49914 203 aa17.24■□□□□ 0.35
PRDM2-208ENST00000487453 VPS72Q15906 364 aa17.24■□□□□ 0.35
PRDM2-208ENST00000487453 USP35Q9P2H5 1018 aa17.24■□□□□ 0.35
PRDM2-208ENST00000487453 RALBP1Q15311 655 aa17.23■□□□□ 0.35
PRDM2-208ENST00000487453 POTEAQ6S8J7 498 aa17.23■□□□□ 0.35
PRDM2-208ENST00000487453 SPATA31A5Q5VU36 1347 aa17.21■□□□□ 0.35
PRDM2-208ENST00000487453 SPATA31A7Q8IWB4 1347 aa17.21■□□□□ 0.35
PRDM2-208ENST00000487453 ANP32CO43423 234 aa17.21■□□□□ 0.35
PRDM2-208ENST00000487453 GJD4Q96KN9 370 aaPredicted RBP17.21■□□□□ 0.35
PRDM2-208ENST00000487453 PRKRIP1Q9H875 184 aaPredicted RBP17.21■□□□□ 0.35
PRDM2-208ENST00000487453 NLRP2Q9NX02 1062 aa17.21■□□□□ 0.35
PRDM2-208ENST00000487453 SPATA31A1Q5TZJ5 1347 aa17.21■□□□□ 0.34
PRDM2-208ENST00000487453 MYBBP1AQ9BQG0 1328 aaKnown RBP17.21■□□□□ 0.34
PRDM2-208ENST00000487453 COL3A1P02461 1466 aaPredicted RBP17.2■□□□□ 0.34
PRDM2-208ENST00000487453 A0A0G2JS52 829 aa17.2■□□□□ 0.34
PRDM2-208ENST00000487453 MYT1Q01538 1121 aa17.2■□□□□ 0.34
PRDM2-208ENST00000487453 RXRBP28702 533 aa17.19■□□□□ 0.34
PRDM2-208ENST00000487453 RBM6P78332 1123 aaKnown RBP17.19■□□□□ 0.34
PRDM2-208ENST00000487453 EIF4A2Q14240 407 aaKnown RBP17.19■□□□□ 0.34
PRDM2-208ENST00000487453 CFAP53Q96M91 514 aa17.19■□□□□ 0.34
PRDM2-208ENST00000487453 RGPD1P0DJD0 1748 aa17.18■□□□□ 0.34
PRDM2-208ENST00000487453 THSD7AQ9UPZ6 1657 aa17.18■□□□□ 0.34
PRDM2-208ENST00000487453 PARP4Q9UKK3 1724 aaKnown RBP17.18■□□□□ 0.34
PRDM2-208ENST00000487453 RGS12O14924 1447 aa17.17■□□□□ 0.34
PRDM2-208ENST00000487453 FAM98CQ17RN3 349 aaKnown RBP17.17■□□□□ 0.34
PRDM2-208ENST00000487453 TCP11L2Q8N4U5 519 aa17.17■□□□□ 0.34
PRDM2-208ENST00000487453 USHBP1Q8N6Y0 703 aa17.17■□□□□ 0.34
PRDM2-208ENST00000487453 CARD10Q9BWT7 1032 aa17.17■□□□□ 0.34
PRDM2-208ENST00000487453 LRRC37A3O60309 1634 aa17.17■□□□□ 0.34
PRDM2-208ENST00000487453 DIAPH1O60610 1272 aaKnown RBP17.15■□□□□ 0.34
PRDM2-208ENST00000487453 NBPF6Q5VWK0 638 aa17.15■□□□□ 0.34
PRDM2-208ENST00000487453 NBPF4Q96M43 638 aa17.15■□□□□ 0.34
PRDM2-208ENST00000487453 THRAP3Q9Y2W1 955 aaKnown RBP17.15■□□□□ 0.34
PRDM2-208ENST00000487453 BRWD3Q6RI45 1802 aa17.13■□□□□ 0.33
PRDM2-208ENST00000487453 DISP2A7MBM2 1401 aa17.13■□□□□ 0.33
PRDM2-208ENST00000487453 MEGF6O75095 1541 aa17.12■□□□□ 0.33
PRDM2-208ENST00000487453 U2SURPO15042 1029 aaKnown RBP17.12■□□□□ 0.33
PRDM2-208ENST00000487453 IL13P35225 146 aa17.12■□□□□ 0.33
PRDM2-208ENST00000487453 DIEXFQ68CQ4 756 aaKnown RBP17.12■□□□□ 0.33
PRDM2-208ENST00000487453 BARGINQ6ZT62 677 aa17.12■□□□□ 0.33
PRDM2-208ENST00000487453 EYA1Q99502 592 aa17.12■□□□□ 0.33
PRDM2-208ENST00000487453 IGSF1Q8N6C5 1336 aa17.12■□□□□ 0.33
PRDM2-208ENST00000487453 NCAPD2Q15021 1401 aa17.12■□□□□ 0.33
PRDM2-208ENST00000487453 IL2RBP14784 551 aa17.1■□□□□ 0.33
PRDM2-208ENST00000487453 SEPT12Q8IYM1 358 aa17.1■□□□□ 0.33
PRDM2-208ENST00000487453 RAPGEF4Q8WZA2 1011 aa17.1■□□□□ 0.33
PRDM2-208ENST00000487453 CDCA7Q9BWT1 371 aaPredicted RBP17.09■□□□□ 0.33
PRDM2-208ENST00000487453 NUDCQ9Y266 331 aa17.09■□□□□ 0.33
PRDM2-208ENST00000487453 TNS2Q63HR2 1409 aa17.09■□□□□ 0.33
PRDM2-208ENST00000487453 PKD1L3Q7Z443 1732 aa17.09■□□□□ 0.33
PRDM2-208ENST00000487453 SHANK3Q9BYB0 1731 aa17.08■□□□□ 0.32
PRDM2-208ENST00000487453 OVOS2A0A0G2JMS6 1433 aa17.08■□□□□ 0.32
PRDM2-208ENST00000487453 SULT6B1Q6IMI4 303 aa17.08■□□□□ 0.32
PRDM2-208ENST00000487453 ONECUT3O60422 494 aaPredicted RBP17.07■□□□□ 0.32
PRDM2-208ENST00000487453 HMOX1P09601 288 aa17.07■□□□□ 0.32
PRDM2-208ENST00000487453 TATP17735 454 aaPredicted RBP17.07■□□□□ 0.32
PRDM2-208ENST00000487453 AEBP1Q8IUX7 1158 aa17.07■□□□□ 0.32
PRDM2-208ENST00000487453 U2AF1L5P0DN76 240 aaPredicted RBP17.06■□□□□ 0.32
PRDM2-208ENST00000487453 U2AF1Q01081 240 aaKnown RBP eCLIP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms