RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 ESPNB1AK53 854 aa8.9□□□□□ -0.98
LINC00888-204ENST00000487386 RAD21O60216 631 aa8.9□□□□□ -0.98
LINC00888-204ENST00000487386 WASHC4Q2M389 1173 aa8.9□□□□□ -0.98
LINC00888-204ENST00000487386 VAC14Q08AM6 782 aa8.89□□□□□ -0.99
LINC00888-204ENST00000487386 CTC1Q2NKJ3 1217 aa8.89□□□□□ -0.99
LINC00888-204ENST00000487386 TRAF7Q6Q0C0 670 aa8.89□□□□□ -0.99
LINC00888-204ENST00000487386 CLUAP1Q96AJ1 413 aa8.89□□□□□ -0.99
LINC00888-204ENST00000487386 ZNF330Q9Y3S2 320 aaPredicted RBP8.89□□□□□ -0.99
LINC00888-204ENST00000487386 PCDHB9Q9Y5E1 797 aa8.89□□□□□ -0.99
LINC00888-204ENST00000487386 A6NJR5 290 aa8.88□□□□□ -0.99
LINC00888-204ENST00000487386 FSHRP23945 695 aa8.88□□□□□ -0.99
LINC00888-204ENST00000487386 NBPF20Q3BBV1 942 aa8.88□□□□□ -0.99
LINC00888-204ENST00000487386 FNBP4Q8N3X1 1017 aaPredicted RBP8.88□□□□□ -0.99
LINC00888-204ENST00000487386 AAASQ9NRG9 546 aa8.88□□□□□ -0.99
LINC00888-204ENST00000487386 INTS6LQ5JSJ4 861 aaKnown RBP8.87□□□□□ -0.99
LINC00888-204ENST00000487386 ZNF592Q92610 1267 aa8.87□□□□□ -0.99
LINC00888-204ENST00000487386 GIGYF1O75420 1035 aaPredicted RBP8.86□□□□□ -0.99
LINC00888-204ENST00000487386 EIF4G2P78344 907 aaKnown RBP eCLIP8.86□□□□□ -0.99
LINC00888-204ENST00000487386 AXIN1O15169 862 aa8.85□□□□□ -0.99
LINC00888-204ENST00000487386 ST8SIA5O15466 376 aa8.85□□□□□ -0.99
LINC00888-204ENST00000487386 TIMP2P16035 220 aa8.85□□□□□ -0.99
LINC00888-204ENST00000487386 SEPT12Q8IYM1 358 aa8.85□□□□□ -0.99
LINC00888-204ENST00000487386 CCDC116Q8IYX3 515 aa8.85□□□□□ -0.99
LINC00888-204ENST00000487386 CEP126Q9P2H0 1117 aa8.85□□□□□ -0.99
LINC00888-204ENST00000487386 WDR4P57081 412 aaKnown RBP8.84□□□□□ -0.99
LINC00888-204ENST00000487386 PPP1R26Q5T8A7 1209 aaPredicted RBP8.84□□□□□ -0.99
LINC00888-204ENST00000487386 WWC1Q8IX03 1113 aa8.84□□□□□ -0.99
LINC00888-204ENST00000487386 CAPN5O15484 640 aaPredicted RBP8.83□□□□□ -1
LINC00888-204ENST00000487386 SOX11P35716 441 aa8.83□□□□□ -1
LINC00888-204ENST00000487386 DHX9Q08211 1270 aaKnown RBP8.83□□□□□ -1
LINC00888-204ENST00000487386 PROSER2Q86WR7 435 aaPredicted RBP8.83□□□□□ -1
LINC00888-204ENST00000487386 CCDC125Q86Z20 511 aa8.83□□□□□ -1
LINC00888-204ENST00000487386 PHTF2Q8N3S3 785 aa8.83□□□□□ -1
LINC00888-204ENST00000487386 ITPKCQ96DU7 683 aa8.83□□□□□ -1
LINC00888-204ENST00000487386 ALG2Q9H553 416 aa8.83□□□□□ -1
LINC00888-204ENST00000487386 EMILIN1Q9Y6C2 1016 aa8.83□□□□□ -1
LINC00888-204ENST00000487386 ERVH48-1M5A8F1 160 aa8.82□□□□□ -1
LINC00888-204ENST00000487386 ZIC2O95409 532 aaPredicted RBP8.82□□□□□ -1
LINC00888-204ENST00000487386 ZFAND3Q9H8U3 227 aa8.82□□□□□ -1
LINC00888-204ENST00000487386 DACH1Q9UI36 760 aa8.82□□□□□ -1
LINC00888-204ENST00000487386 POM121CA8CG34 1229 aa8.81□□□□□ -1
LINC00888-204ENST00000487386 RNF20Q5VTR2 975 aa8.8□□□□□ -1
LINC00888-204ENST00000487386 PGPEP1Q9NXJ5 209 aa8.8□□□□□ -1
LINC00888-204ENST00000487386 SEMA3FQ13275 785 aa8.79□□□□□ -1
LINC00888-204ENST00000487386 ADAMTS19Q8TE59 1207 aa8.79□□□□□ -1
LINC00888-204ENST00000487386 TMPRSS4Q9NRS4 437 aa8.79□□□□□ -1
LINC00888-204ENST00000487386 CHIC2Q9UKJ5 165 aa8.79□□□□□ -1
LINC00888-204ENST00000487386 LILRA1O75019 489 aa8.78□□□□□ -1
LINC00888-204ENST00000487386 RAB15P59190 212 aa8.78□□□□□ -1
LINC00888-204ENST00000487386 Q6ZVU0 165 aa8.78□□□□□ -1
LINC00888-204ENST00000487386 TRIM46Q7Z4K8 759 aa8.78□□□□□ -1
LINC00888-204ENST00000487386 ATP13A2Q9NQ11 1180 aa8.78□□□□□ -1
LINC00888-204ENST00000487386 TRAK2O60296 914 aa8.77□□□□□ -1.01
LINC00888-204ENST00000487386 ZNF784Q8NCA9 323 aaPredicted RBP8.77□□□□□ -1.01
LINC00888-204ENST00000487386 CCDC85AQ96PX6 553 aaPredicted RBP8.77□□□□□ -1.01
LINC00888-204ENST00000487386 ZMYND15Q9H091 742 aa8.77□□□□□ -1.01
LINC00888-204ENST00000487386 TSGA10IPQ3SY00 556 aa8.76□□□□□ -1.01
LINC00888-204ENST00000487386 MEIOBQ8N635 442 aa8.76□□□□□ -1.01
LINC00888-204ENST00000487386 ADD1P35611 737 aaKnown RBP8.75□□□□□ -1.01
LINC00888-204ENST00000487386 ERVK-9P63128 1117 aa8.75□□□□□ -1.01
LINC00888-204ENST00000487386 CBLBQ13191 982 aa8.75□□□□□ -1.01
LINC00888-204ENST00000487386 SLFNL1Q499Z3 407 aa8.75□□□□□ -1.01
LINC00888-204ENST00000487386 HDGFL1Q5TGJ6 251 aa8.75□□□□□ -1.01
LINC00888-204ENST00000487386 BMP1P13497 986 aa8.74□□□□□ -1.01
LINC00888-204ENST00000487386 MRPL14Q6P1L8 145 aaKnown RBP8.74□□□□□ -1.01
LINC00888-204ENST00000487386 RNF135Q8IUD6 432 aa8.74□□□□□ -1.01
LINC00888-204ENST00000487386 PCDHB11Q9Y5F2 797 aa8.74□□□□□ -1.01
LINC00888-204ENST00000487386 POTECB2RU33 542 aa8.73□□□□□ -1.01
LINC00888-204ENST00000487386 KDF1Q8NAX2 398 aaPredicted RBP8.73□□□□□ -1.01
LINC00888-204ENST00000487386 TRIM52Q96A61 297 aa8.73□□□□□ -1.01
LINC00888-204ENST00000487386 CDCA7Q9BWT1 371 aaPredicted RBP8.73□□□□□ -1.01
LINC00888-204ENST00000487386 CYLDQ9NQC7 956 aa8.73□□□□□ -1.01
LINC00888-204ENST00000487386 GMPR2Q9P2T1 348 aaKnown RBP8.73□□□□□ -1.01
LINC00888-204ENST00000487386 PIK3CDO00329 1044 aa8.72□□□□□ -1.01
LINC00888-204ENST00000487386 SCTRP47872 440 aa8.72□□□□□ -1.01
LINC00888-204ENST00000487386 CC2D2BQ6DHV5 1058 aa8.72□□□□□ -1.01
LINC00888-204ENST00000487386 NFATC2IPQ8NCF5 419 aa8.72□□□□□ -1.01
LINC00888-204ENST00000487386 GLMNQ92990 594 aa8.72□□□□□ -1.01
LINC00888-204ENST00000487386 TSEN34Q9BSV6 310 aaKnown RBP8.71□□□□□ -1.02
LINC00888-204ENST00000487386 ADH1AP07327 375 aa8.7□□□□□ -1.02
LINC00888-204ENST00000487386 MAP7D1Q3KQU3 841 aa8.7□□□□□ -1.02
LINC00888-204ENST00000487386 LINC00528Q8N1L1 170 aa8.7□□□□□ -1.02
LINC00888-204ENST00000487386 PLPP7Q8NBV4 271 aa8.7□□□□□ -1.02
LINC00888-204ENST00000487386 ZFP42Q96MM3 310 aa8.7□□□□□ -1.02
LINC00888-204ENST00000487386 UCN2Q96RP3 112 aa8.7□□□□□ -1.02
LINC00888-204ENST00000487386 OSBPL3Q9H4L5 887 aa8.7□□□□□ -1.02
LINC00888-204ENST00000487386 DOLKQ9UPQ8 538 aa8.7□□□□□ -1.02
LINC00888-204ENST00000487386 SCARF1Q14162 830 aa8.69□□□□□ -1.02
LINC00888-204ENST00000487386 TRIM47Q96LD4 638 aa8.69□□□□□ -1.02
LINC00888-204ENST00000487386 AGBL1Q96MI9 1066 aa8.69□□□□□ -1.02
LINC00888-204ENST00000487386 PURBQ96QR8 312 aaKnown RBP8.69□□□□□ -1.02
LINC00888-204ENST00000487386 SENP2Q9HC62 589 aa8.69□□□□□ -1.02
LINC00888-204ENST00000487386 ZNF777Q9ULD5 760 aaPredicted RBP8.69□□□□□ -1.02
LINC00888-204ENST00000487386 PTGIRP43119 386 aa8.68□□□□□ -1.02
LINC00888-204ENST00000487386 ZNF787Q6DD87 383 aa8.68□□□□□ -1.02
LINC00888-204ENST00000487386 KIFC2Q96AC6 838 aa8.68□□□□□ -1.02
LINC00888-204ENST00000487386 SPINT1O43278 529 aa8.67□□□□□ -1.02
LINC00888-204ENST00000487386 UPP2O95045 317 aa8.67□□□□□ -1.02
LINC00888-204ENST00000487386 USP4Q13107 963 aa8.67□□□□□ -1.02
LINC00888-204ENST00000487386 LZTS3O60299 673 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms