RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 TCP11L2Q8N4U5 519 aa10.58□□□□□ -0.72
ZNF541-204ENST00000487275 PRKAR2BP31323 418 aa10.57□□□□□ -0.72
ZNF541-204ENST00000487275 IP6K1Q92551 441 aa10.57□□□□□ -0.72
ZNF541-204ENST00000487275 PLEKHF1Q96S99 279 aa10.57□□□□□ -0.72
ZNF541-204ENST00000487275 RSPH6AQ9H0K4 717 aa10.57□□□□□ -0.72
ZNF541-204ENST00000487275 IQSEC2Q5JU85 1478 aa10.56□□□□□ -0.72
ZNF541-204ENST00000487275 TOM1O60784 492 aa10.56□□□□□ -0.72
ZNF541-204ENST00000487275 NEUROD2Q15784 382 aa10.56□□□□□ -0.72
ZNF541-204ENST00000487275 ARHGEF25Q86VW2 580 aa10.56□□□□□ -0.72
ZNF541-204ENST00000487275 LTV1Q96GA3 475 aaPredicted RBP10.56□□□□□ -0.72
ZNF541-204ENST00000487275 RRP7AQ9Y3A4 280 aaKnown RBP10.56□□□□□ -0.72
ZNF541-204ENST00000487275 NHSL1Q5SYE7 1610 aa10.55□□□□□ -0.72
ZNF541-204ENST00000487275 HAP1P54257 671 aaPredicted RBP10.55□□□□□ -0.72
ZNF541-204ENST00000487275 ZC3H6P61129 1189 aaKnown RBP10.55□□□□□ -0.72
ZNF541-204ENST00000487275 NCBP3Q53F19 620 aaKnown RBP10.55□□□□□ -0.72
ZNF541-204ENST00000487275 SULT6B1Q6IMI4 303 aa10.55□□□□□ -0.72
ZNF541-204ENST00000487275 MED1Q15648 1581 aaPredicted RBP10.55□□□□□ -0.72
ZNF541-204ENST00000487275 TMPOP42166 694 aaKnown RBP10.54□□□□□ -0.72
ZNF541-204ENST00000487275 GOLGA2Q08379 1002 aa10.54□□□□□ -0.72
ZNF541-204ENST00000487275 CCDC27Q2M243 656 aa10.54□□□□□ -0.72
ZNF541-204ENST00000487275 CABLES1Q8TDN4 633 aa10.54□□□□□ -0.72
ZNF541-204ENST00000487275 LTN1O94822 1766 aa10.54□□□□□ -0.72
ZNF541-204ENST00000487275 ZNF521Q96K83 1311 aa10.54□□□□□ -0.72
ZNF541-204ENST00000487275 ROBO1Q9Y6N7 1651 aa10.53□□□□□ -0.72
ZNF541-204ENST00000487275 AEBP1Q8IUX7 1158 aa10.53□□□□□ -0.72
ZNF541-204ENST00000487275 WWC1Q8IX03 1113 aa10.53□□□□□ -0.72
ZNF541-204ENST00000487275 LRRC59Q96AG4 307 aaKnown RBP10.53□□□□□ -0.72
ZNF541-204ENST00000487275 CDCA7LQ96GN5 454 aa10.53□□□□□ -0.72
ZNF541-204ENST00000487275 EYA1Q99502 592 aa10.53□□□□□ -0.72
ZNF541-204ENST00000487275 IGSF1Q8N6C5 1336 aa10.53□□□□□ -0.72
ZNF541-204ENST00000487275 AHDC1Q5TGY3 1603 aaPredicted RBP10.52□□□□□ -0.73
ZNF541-204ENST00000487275 PHRF1Q9P1Y6 1649 aaKnown RBP10.52□□□□□ -0.73
ZNF541-204ENST00000487275 UBAP1LF5GYI3 381 aa10.52□□□□□ -0.73
ZNF541-204ENST00000487275 RIPK4P57078 832 aa10.52□□□□□ -0.73
ZNF541-204ENST00000487275 PIP4K2BP78356 416 aa10.52□□□□□ -0.73
ZNF541-204ENST00000487275 NFE2L2Q16236 605 aa10.52□□□□□ -0.73
ZNF541-204ENST00000487275 RGPD1P0DJD0 1748 aa10.51□□□□□ -0.73
ZNF541-204ENST00000487275 E9PSI1 815 aa10.51□□□□□ -0.73
ZNF541-204ENST00000487275 SLFN5Q08AF3 891 aa10.51□□□□□ -0.73
ZNF541-204ENST00000487275 LMOD3Q0VAK6 560 aa10.51□□□□□ -0.73
ZNF541-204ENST00000487275 WDR63Q8IWG1 891 aa10.51□□□□□ -0.73
ZNF541-204ENST00000487275 ANKRD24Q8TF21 1146 aa10.51□□□□□ -0.73
ZNF541-204ENST00000487275 PHACTR3Q96KR7 559 aa10.51□□□□□ -0.73
ZNF541-204ENST00000487275 PHF23Q9BUL5 403 aaPredicted RBP10.51□□□□□ -0.73
ZNF541-204ENST00000487275 CPDO75976 1380 aa10.51□□□□□ -0.73
ZNF541-204ENST00000487275 KIAA0232Q92628 1395 aa10.51□□□□□ -0.73
ZNF541-204ENST00000487275 GTF3C3Q9Y5Q9 886 aa10.5□□□□□ -0.73
ZNF541-204ENST00000487275 KDRP35968 1356 aa10.5□□□□□ -0.73
ZNF541-204ENST00000487275 ABCC6O95255 1503 aa10.49□□□□□ -0.73
ZNF541-204ENST00000487275 NEFLP07196 543 aa10.49□□□□□ -0.73
ZNF541-204ENST00000487275 CSB-PGBD3P0DP91 1061 aa10.49□□□□□ -0.73
ZNF541-204ENST00000487275 CHRNA2Q15822 529 aa10.49□□□□□ -0.73
ZNF541-204ENST00000487275 DUSP27Q5VZP5 1158 aa10.49□□□□□ -0.73
ZNF541-204ENST00000487275 CERKQ8TCT0 537 aa10.49□□□□□ -0.73
ZNF541-204ENST00000487275 PRDM11Q9NQV5 511 aa10.49□□□□□ -0.73
ZNF541-204ENST00000487275 TRIM35Q9UPQ4 493 aa10.49□□□□□ -0.73
ZNF541-204ENST00000487275 AXIN2Q9Y2T1 843 aa10.49□□□□□ -0.73
ZNF541-204ENST00000487275 SUPT16HQ9Y5B9 1047 aaKnown RBP10.49□□□□□ -0.73
ZNF541-204ENST00000487275 CRYBG1Q9Y4K1 1723 aa10.49□□□□□ -0.73
ZNF541-204ENST00000487275 CALD1Q05682 793 aaKnown RBP10.48□□□□□ -0.73
ZNF541-204ENST00000487275 NBPF6Q5VWK0 638 aa10.48□□□□□ -0.73
ZNF541-204ENST00000487275 USHBP1Q8N6Y0 703 aa10.48□□□□□ -0.73
ZNF541-204ENST00000487275 GAS2L2Q8NHY3 880 aa10.48□□□□□ -0.73
ZNF541-204ENST00000487275 NBPF4Q96M43 638 aa10.48□□□□□ -0.73
ZNF541-204ENST00000487275 ERBB3P21860 1342 aa10.48□□□□□ -0.73
ZNF541-204ENST00000487275 TRMT2AQ8IZ69 625 aaKnown RBP10.47□□□□□ -0.73
ZNF541-204ENST00000487275 MYH16Q9H6N6 1097 aa10.47□□□□□ -0.73
ZNF541-204ENST00000487275 SPINK5Q9NQ38 1064 aaPredicted RBP10.47□□□□□ -0.73
ZNF541-204ENST00000487275 IL16Q14005 1332 aa10.47□□□□□ -0.73
ZNF541-204ENST00000487275 PHLPP1O60346 1717 aa10.47□□□□□ -0.73
ZNF541-204ENST00000487275 MTHFSDQ2M296 383 aaKnown RBP10.46□□□□□ -0.73
ZNF541-204ENST00000487275 NLRP2Q9NX02 1062 aa10.46□□□□□ -0.73
ZNF541-204ENST00000487275 RCAN3Q9UKA8 241 aa10.46□□□□□ -0.73
ZNF541-204ENST00000487275 ABCA3Q99758 1704 aa10.45□□□□□ -0.74
ZNF541-204ENST00000487275 RTF1Q92541 710 aaKnown RBP10.45□□□□□ -0.74
ZNF541-204ENST00000487275 COL18A1P39060 1754 aa10.44□□□□□ -0.74
ZNF541-204ENST00000487275 COL16A1Q07092 1604 aaPredicted RBP10.44□□□□□ -0.74
ZNF541-204ENST00000487275 NCAPD2Q15021 1401 aa10.44□□□□□ -0.74
ZNF541-204ENST00000487275 PLEKHO1Q53GL0 409 aaPredicted RBP10.44□□□□□ -0.74
ZNF541-204ENST00000487275 LAS1LQ9Y4W2 734 aaKnown RBP10.44□□□□□ -0.74
ZNF541-204ENST00000487275 COL22A1Q8NFW1 1626 aaPredicted RBP10.44□□□□□ -0.74
ZNF541-204ENST00000487275 HTATSF1O43719 755 aaKnown RBP10.43□□□□□ -0.74
ZNF541-204ENST00000487275 EVA1CP58658 441 aa10.43□□□□□ -0.74
ZNF541-204ENST00000487275 AMOTQ4VCS5 1084 aa10.43□□□□□ -0.74
ZNF541-204ENST00000487275 RAPGEF4Q8WZA2 1011 aa10.43□□□□□ -0.74
ZNF541-204ENST00000487275 THUMPD2Q9BTF0 503 aaKnown RBP10.43□□□□□ -0.74
ZNF541-204ENST00000487275 RGPD5Q99666 1765 aa10.42□□□□□ -0.74
ZNF541-204ENST00000487275 MAP3K5Q99683 1374 aa10.42□□□□□ -0.74
ZNF541-204ENST00000487275 WDR17Q8IZU2 1322 aa10.42□□□□□ -0.74
ZNF541-204ENST00000487275 FANCIQ9NVI1 1328 aa10.42□□□□□ -0.74
ZNF541-204ENST00000487275 FAM208AQ9UK61 1670 aaKnown RBP10.42□□□□□ -0.74
ZNF541-204ENST00000487275 CAMTA1Q9Y6Y1 1673 aa10.42□□□□□ -0.74
ZNF541-204ENST00000487275 FAM83GA6ND36 823 aa10.42□□□□□ -0.74
ZNF541-204ENST00000487275 TATP17735 454 aaPredicted RBP10.42□□□□□ -0.74
ZNF541-204ENST00000487275 GNAI1P63096 354 aa10.42□□□□□ -0.74
ZNF541-204ENST00000487275 DCTN1Q14203 1278 aa10.42□□□□□ -0.74
ZNF541-204ENST00000487275 FKBP8Q14318 412 aa10.42□□□□□ -0.74
ZNF541-204ENST00000487275 TOM1L2Q6ZVM7 507 aa10.42□□□□□ -0.74
ZNF541-204ENST00000487275 TSR2Q969E8 191 aaKnown RBP10.42□□□□□ -0.74
ZNF541-204ENST00000487275 IFT57Q9NWB7 429 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms