RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 NUTM2GQ5VZR2 741 aa10.15□□□□□ -0.78
UBE4B-209ENST00000487244 ZNF772Q68DY9 489 aaPredicted RBP10.15□□□□□ -0.78
UBE4B-209ENST00000487244 ASTLQ6HA08 431 aaPredicted RBP10.15□□□□□ -0.78
UBE4B-209ENST00000487244 CABP1Q9NZU7 370 aa10.15□□□□□ -0.78
UBE4B-209ENST00000487244 MON2Q7Z3U7 1717 aa10.15□□□□□ -0.78
UBE4B-209ENST00000487244 BCL9LQ86UU0 1499 aa10.15□□□□□ -0.78
UBE4B-209ENST00000487244 USP47Q96K76 1375 aa10.14□□□□□ -0.79
UBE4B-209ENST00000487244 NRAPQ86VF7 1730 aa10.14□□□□□ -0.79
UBE4B-209ENST00000487244 NWD2Q9ULI1 1742 aa10.14□□□□□ -0.79
UBE4B-209ENST00000487244 ST20-MTHFSA0A0A6YYL1 179 aa10.14□□□□□ -0.79
UBE4B-209ENST00000487244 TESK2Q96S53 571 aa10.14□□□□□ -0.79
UBE4B-209ENST00000487244 BMP2KQ9NSY1 1161 aaPredicted RBP10.14□□□□□ -0.79
UBE4B-209ENST00000487244 USP6P35125 1406 aa10.14□□□□□ -0.79
UBE4B-209ENST00000487244 SLIT2O94813 1529 aa10.13□□□□□ -0.79
UBE4B-209ENST00000487244 CD163L1Q9NR16 1453 aa10.13□□□□□ -0.79
UBE4B-209ENST00000487244 HAP1P54257 671 aaPredicted RBP10.13□□□□□ -0.79
UBE4B-209ENST00000487244 FNBP4Q8N3X1 1017 aaPredicted RBP10.13□□□□□ -0.79
UBE4B-209ENST00000487244 USP21Q9UK80 565 aa10.13□□□□□ -0.79
UBE4B-209ENST00000487244 ATRNO75882 1429 aa10.13□□□□□ -0.79
UBE4B-209ENST00000487244 SSH2Q76I76 1423 aa10.13□□□□□ -0.79
UBE4B-209ENST00000487244 ATAD2Q6PL18 1390 aa10.13□□□□□ -0.79
UBE4B-209ENST00000487244 COL14A1Q05707 1796 aaKnown RBP10.12□□□□□ -0.79
UBE4B-209ENST00000487244 ECM2O94769 699 aaPredicted RBP10.12□□□□□ -0.79
UBE4B-209ENST00000487244 ATN1P54259 1190 aaPredicted RBP10.12□□□□□ -0.79
UBE4B-209ENST00000487244 TMEM106CQ9BVX2 250 aa10.12□□□□□ -0.79
UBE4B-209ENST00000487244 QTRT2Q9H974 415 aaKnown RBP10.12□□□□□ -0.79
UBE4B-209ENST00000487244 TIMELESSQ9UNS1 1208 aa10.12□□□□□ -0.79
UBE4B-209ENST00000487244 RGS12O14924 1447 aa10.12□□□□□ -0.79
UBE4B-209ENST00000487244 GLI3P10071 1580 aa10.11□□□□□ -0.79
UBE4B-209ENST00000487244 CPSF1Q10570 1443 aaKnown RBP10.11□□□□□ -0.79
UBE4B-209ENST00000487244 FAM83GA6ND36 823 aa10.11□□□□□ -0.79
UBE4B-209ENST00000487244 TTLL13PA6NNM8 815 aa10.11□□□□□ -0.79
UBE4B-209ENST00000487244 MYOM1P52179 1685 aa10.1□□□□□ -0.79
UBE4B-209ENST00000487244 RXRBP28702 533 aa10.1□□□□□ -0.79
UBE4B-209ENST00000487244 CDK12Q9NYV4 1490 aaPredicted RBP10.1□□□□□ -0.79
UBE4B-209ENST00000487244 USP19O94966 1318 aa10.09□□□□□ -0.79
UBE4B-209ENST00000487244 PDAP1Q13442 181 aaKnown RBP10.09□□□□□ -0.79
UBE4B-209ENST00000487244 PELP1Q8IZL8 1130 aaKnown RBP10.09□□□□□ -0.79
UBE4B-209ENST00000487244 ABTB2Q8N961 1025 aa10.09□□□□□ -0.79
UBE4B-209ENST00000487244 SLC12A5Q9H2X9 1139 aa10.09□□□□□ -0.79
UBE4B-209ENST00000487244 TRPC5Q9UL62 973 aaPredicted RBP10.09□□□□□ -0.79
UBE4B-209ENST00000487244 KIAA0232Q92628 1395 aa10.09□□□□□ -0.79
UBE4B-209ENST00000487244 BRWD3Q6RI45 1802 aa10.09□□□□□ -0.79
UBE4B-209ENST00000487244 LMO7Q8WWI1 1683 aa10.09□□□□□ -0.79
UBE4B-209ENST00000487244 SLIT3O75094 1523 aa10.08□□□□□ -0.8
UBE4B-209ENST00000487244 RIOK3O14730 519 aaKnown RBP10.08□□□□□ -0.8
UBE4B-209ENST00000487244 PSEN1P49768 467 aa10.08□□□□□ -0.8
UBE4B-209ENST00000487244 RBM6P78332 1123 aaKnown RBP10.08□□□□□ -0.8
UBE4B-209ENST00000487244 CHRNA2Q15822 529 aa10.08□□□□□ -0.8
UBE4B-209ENST00000487244 UNC5CLQ8IV45 518 aa10.08□□□□□ -0.8
UBE4B-209ENST00000487244 TMC1Q8TDI8 760 aa10.08□□□□□ -0.8
UBE4B-209ENST00000487244 KTN1Q86UP2 1357 aaKnown RBP10.08□□□□□ -0.8
UBE4B-209ENST00000487244 EP400Q96L91 3159 aa10.08□□□□□ -0.8
UBE4B-209ENST00000487244 TTC21BQ7Z4L5 1316 aa10.07□□□□□ -0.8
UBE4B-209ENST00000487244 RGPD5Q99666 1765 aa10.07□□□□□ -0.8
UBE4B-209ENST00000487244 USP54Q70EL1 1684 aa10.07□□□□□ -0.8
UBE4B-209ENST00000487244 A0A1W2PP64 1363 aa10.07□□□□□ -0.8
UBE4B-209ENST00000487244 BRD4O60885 1362 aaPredicted RBP10.07□□□□□ -0.8
UBE4B-209ENST00000487244 ZC3H6P61129 1189 aaKnown RBP10.07□□□□□ -0.8
UBE4B-209ENST00000487244 PRDM11Q9NQV5 511 aa10.07□□□□□ -0.8
UBE4B-209ENST00000487244 COL18A1P39060 1754 aa10.06□□□□□ -0.8
UBE4B-209ENST00000487244 SLC39A7Q92504 469 aa10.06□□□□□ -0.8
UBE4B-209ENST00000487244 GJD4Q96KN9 370 aaPredicted RBP10.06□□□□□ -0.8
UBE4B-209ENST00000487244 BTG4Q9NY30 223 aa10.06□□□□□ -0.8
UBE4B-209ENST00000487244 TRIM35Q9UPQ4 493 aa10.06□□□□□ -0.8
UBE4B-209ENST00000487244 NFAT5O94916 1531 aa10.06□□□□□ -0.8
UBE4B-209ENST00000487244 CAMTA1Q9Y6Y1 1673 aa10.06□□□□□ -0.8
UBE4B-209ENST00000487244 C7P10643 843 aa10.05□□□□□ -0.8
UBE4B-209ENST00000487244 NLRP6P59044 892 aa10.05□□□□□ -0.8
UBE4B-209ENST00000487244 NLRP13Q86W25 1043 aa10.05□□□□□ -0.8
UBE4B-209ENST00000487244 NME9Q86XW9 330 aa10.05□□□□□ -0.8
UBE4B-209ENST00000487244 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.05□□□□□ -0.8
UBE4B-209ENST00000487244 LTN1O94822 1766 aa10.05□□□□□ -0.8
UBE4B-209ENST00000487244 CPDO75976 1380 aa10.04□□□□□ -0.8
UBE4B-209ENST00000487244 GCP02774 474 aa10.04□□□□□ -0.8
UBE4B-209ENST00000487244 TMF1P82094 1093 aa10.04□□□□□ -0.8
UBE4B-209ENST00000487244 VPS72Q15906 364 aa10.04□□□□□ -0.8
UBE4B-209ENST00000487244 PUS7Q96PZ0 661 aaKnown RBP10.04□□□□□ -0.8
UBE4B-209ENST00000487244 TAOK2Q9UL54 1235 aa10.04□□□□□ -0.8
UBE4B-209ENST00000487244 EDC4Q6P2E9 1401 aaKnown RBP10.04□□□□□ -0.8
UBE4B-209ENST00000487244 TTC21AQ8NDW8 1320 aa10.04□□□□□ -0.8
UBE4B-209ENST00000487244 NINLQ9Y2I6 1382 aa10.03□□□□□ -0.8
UBE4B-209ENST00000487244 SOX12O15370 315 aa10.03□□□□□ -0.8
UBE4B-209ENST00000487244 HSPA5P11021 654 aaKnown RBP10.03□□□□□ -0.8
UBE4B-209ENST00000487244 GOLGA2Q08379 1002 aa10.03□□□□□ -0.8
UBE4B-209ENST00000487244 HDGFL2Q7Z4V5 671 aaPredicted RBP10.03□□□□□ -0.8
UBE4B-209ENST00000487244 RNF25Q96BH1 459 aaPredicted RBP10.03□□□□□ -0.8
UBE4B-209ENST00000487244 METRNQ9UJH8 293 aa10.03□□□□□ -0.8
UBE4B-209ENST00000487244 CCDC9Q9Y3X0 531 aaKnown RBP10.03□□□□□ -0.8
UBE4B-209ENST00000487244 KIF20BQ96Q89 1820 aa10.03□□□□□ -0.8
UBE4B-209ENST00000487244 THSD7AQ9UPZ6 1657 aa10.02□□□□□ -0.8
UBE4B-209ENST00000487244 ZBTB7CA1YPR0 619 aa10.02□□□□□ -0.81
UBE4B-209ENST00000487244 STRN4Q9NRL3 753 aa10.02□□□□□ -0.81
UBE4B-209ENST00000487244 TERF2IPQ9NYB0 399 aa10.02□□□□□ -0.81
UBE4B-209ENST00000487244 COL5A2P05997 1499 aaPredicted RBP10.02□□□□□ -0.81
UBE4B-209ENST00000487244 USP31Q70CQ4 1352 aa10.01□□□□□ -0.81
UBE4B-209ENST00000487244 ANKRD36BQ8N2N9 1353 aa10.01□□□□□ -0.81
UBE4B-209ENST00000487244 OVOS2A0A0J9YW53 1432 aa10.01□□□□□ -0.81
UBE4B-209ENST00000487244 OVOS2Q6IE36 1432 aa10.01□□□□□ -0.81
UBE4B-209ENST00000487244 SPATA31A5Q5VU36 1347 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms