RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 PCGF6Q9BYE7 350 aa26.86■■□□□ 1.89
CLIP2-206ENST00000487091 USP54Q70EL1 1684 aa26.85■■□□□ 1.89
CLIP2-206ENST00000487091 NFAT5O94916 1531 aa26.85■■□□□ 1.89
CLIP2-206ENST00000487091 RGPD1P0DJD0 1748 aa26.85■■□□□ 1.89
CLIP2-206ENST00000487091 SOX12O15370 315 aa26.85■■□□□ 1.89
CLIP2-206ENST00000487091 A0A1W2PP64 1363 aa26.84■■□□□ 1.89
CLIP2-206ENST00000487091 NME9Q86XW9 330 aa26.84■■□□□ 1.89
CLIP2-206ENST00000487091 WDR17Q8IZU2 1322 aa26.84■■□□□ 1.89
CLIP2-206ENST00000487091 USP47Q96K76 1375 aa26.84■■□□□ 1.89
CLIP2-206ENST00000487091 TOM1L2Q6ZVM7 507 aa26.83■■□□□ 1.89
CLIP2-206ENST00000487091 PARP4Q9UKK3 1724 aaKnown RBP26.82■■□□□ 1.88
CLIP2-206ENST00000487091 ABCC6O95255 1503 aa26.81■■□□□ 1.88
CLIP2-206ENST00000487091 RGPD5Q99666 1765 aa26.8■■□□□ 1.88
CLIP2-206ENST00000487091 TMF1P82094 1093 aa26.8■■□□□ 1.88
CLIP2-206ENST00000487091 DISP2A7MBM2 1401 aa26.8■■□□□ 1.88
CLIP2-206ENST00000487091 TNS1Q9HBL0 1735 aaKnown RBP26.77■■□□□ 1.88
CLIP2-206ENST00000487091 C11orf95C9JLR9 678 aaPredicted RBP26.77■■□□□ 1.88
CLIP2-206ENST00000487091 TRIM37O94972 964 aa26.77■■□□□ 1.88
CLIP2-206ENST00000487091 EN1Q05925 392 aaPredicted RBP26.77■■□□□ 1.88
CLIP2-206ENST00000487091 CARD10Q9BWT7 1032 aa26.77■■□□□ 1.88
CLIP2-206ENST00000487091 CSB-PGBD3P0DP91 1061 aa26.76■■□□□ 1.87
CLIP2-206ENST00000487091 CDCA7Q9BWT1 371 aaPredicted RBP26.76■■□□□ 1.87
CLIP2-206ENST00000487091 OVOS2A0A0J9YW53 1432 aa26.74■■□□□ 1.87
CLIP2-206ENST00000487091 OVOS2Q6IE36 1432 aa26.74■■□□□ 1.87
CLIP2-206ENST00000487091 CDCA8Q53HL2 280 aa26.74■■□□□ 1.87
CLIP2-206ENST00000487091 ANKRD36BQ8N2N9 1353 aa26.73■■□□□ 1.87
CLIP2-206ENST00000487091 DDB1Q16531 1140 aa26.73■■□□□ 1.87
CLIP2-206ENST00000487091 LTN1O94822 1766 aa26.71■■□□□ 1.87
CLIP2-206ENST00000487091 CCDC7Q96M83 1385 aa26.71■■□□□ 1.87
CLIP2-206ENST00000487091 WNK3Q9BYP7 1800 aa26.7■■□□□ 1.87
CLIP2-206ENST00000487091 LRRC37A3O60309 1634 aa26.7■■□□□ 1.86
CLIP2-206ENST00000487091 APBA3O96018 575 aa26.7■■□□□ 1.86
CLIP2-206ENST00000487091 SRCAPQ6ZRS2 3230 aa26.7■■□□□ 1.86
CLIP2-206ENST00000487091 OVOS2A0A0G2JMS6 1433 aa26.69■■□□□ 1.86
CLIP2-206ENST00000487091 CAMKK2Q96RR4 588 aa26.69■■□□□ 1.86
CLIP2-206ENST00000487091 PARD3Q8TEW0 1356 aa26.69■■□□□ 1.86
CLIP2-206ENST00000487091 ERBB3P21860 1342 aa26.68■■□□□ 1.86
CLIP2-206ENST00000487091 EZH2Q15910 746 aaKnown RBP26.68■■□□□ 1.86
CLIP2-206ENST00000487091 COG3Q96JB2 828 aa26.68■■□□□ 1.86
CLIP2-206ENST00000487091 PEAK1Q9H792 1746 aa26.66■■□□□ 1.86
CLIP2-206ENST00000487091 CCER1Q8TC90 406 aaPredicted RBP26.65■■□□□ 1.86
CLIP2-206ENST00000487091 IP6K1Q92551 441 aa26.64■■□□□ 1.86
CLIP2-206ENST00000487091 EXOC5O00471 708 aa26.63■■□□□ 1.85
CLIP2-206ENST00000487091 MARCH10Q8NA82 808 aaPredicted RBP26.63■■□□□ 1.85
CLIP2-206ENST00000487091 ANKRD24Q8TF21 1146 aa26.63■■□□□ 1.85
CLIP2-206ENST00000487091 NLRP2Q9NX02 1062 aa26.63■■□□□ 1.85
CLIP2-206ENST00000487091 BCL9O00512 1426 aa26.63■■□□□ 1.85
CLIP2-206ENST00000487091 SBF2Q86WG5 1849 aa26.61■■□□□ 1.85
CLIP2-206ENST00000487091 FYB1O15117 783 aa26.61■■□□□ 1.85
CLIP2-206ENST00000487091 PSDA5PKW4 1024 aaPredicted RBP26.6■■□□□ 1.85
CLIP2-206ENST00000487091 MAP3K19Q56UN5 1328 aa26.59■■□□□ 1.85
CLIP2-206ENST00000487091 IL2RBP14784 551 aa26.57■■□□□ 1.84
CLIP2-206ENST00000487091 BCL11BQ9C0K0 894 aaPredicted RBP26.57■■□□□ 1.84
CLIP2-206ENST00000487091 RREB1Q92766 1687 aa26.57■■□□□ 1.84
CLIP2-206ENST00000487091 TNS2Q63HR2 1409 aa26.56■■□□□ 1.84
CLIP2-206ENST00000487091 GGNBP2Q9H3C7 697 aa26.56■■□□□ 1.84
CLIP2-206ENST00000487091 PLSCR1O15162 318 aa26.55■■□□□ 1.84
CLIP2-206ENST00000487091 HOXC9P31274 260 aa26.55■■□□□ 1.84
CLIP2-206ENST00000487091 AMPHP49418 695 aa26.55■■□□□ 1.84
CLIP2-206ENST00000487091 R3HDM1Q15032 1099 aaKnown RBP26.55■■□□□ 1.84
CLIP2-206ENST00000487091 FBLN1P23142 703 aa26.54■■□□□ 1.84
CLIP2-206ENST00000487091 MYOM1P52179 1685 aa26.54■■□□□ 1.84
CLIP2-206ENST00000487091 FAM208AQ9UK61 1670 aaKnown RBP26.54■■□□□ 1.84
CLIP2-206ENST00000487091 CARD14Q9BXL6 1004 aa26.53■■□□□ 1.84
CLIP2-206ENST00000487091 RTL1A6NKG5 1358 aa26.52■■□□□ 1.84
CLIP2-206ENST00000487091 EIF4G2P78344 907 aaKnown RBP eCLIP26.52■■□□□ 1.84
CLIP2-206ENST00000487091 LTV1Q96GA3 475 aaPredicted RBP26.52■■□□□ 1.84
CLIP2-206ENST00000487091 RGPD3A6NKT7 1758 aaPredicted RBP26.51■■□□□ 1.83
CLIP2-206ENST00000487091 RGPD4Q7Z3J3 1758 aa26.51■■□□□ 1.83
CLIP2-206ENST00000487091 NUP188Q5SRE5 1749 aa26.51■■□□□ 1.83
CLIP2-206ENST00000487091 LRP5O75197 1615 aa26.51■■□□□ 1.83
CLIP2-206ENST00000487091 NBPF14Q5TI25 921 aa26.51■■□□□ 1.83
CLIP2-206ENST00000487091 KIF20BQ96Q89 1820 aa26.51■■□□□ 1.83
CLIP2-206ENST00000487091 PTF1AQ7RTS3 328 aa26.5■■□□□ 1.83
CLIP2-206ENST00000487091 RRS1Q15050 365 aaKnown RBP26.49■■□□□ 1.83
CLIP2-206ENST00000487091 NSD3Q9BZ95 1437 aa26.48■■□□□ 1.83
CLIP2-206ENST00000487091 HSPA5P11021 654 aaKnown RBP26.46■■□□□ 1.83
CLIP2-206ENST00000487091 KIF24Q5T7B8 1368 aa26.45■■□□□ 1.82
CLIP2-206ENST00000487091 KCNQ2O43526 872 aa26.42■■□□□ 1.82
CLIP2-206ENST00000487091 PROM2Q8N271 834 aa26.41■■□□□ 1.82
CLIP2-206ENST00000487091 POLR3GLQ9BT43 218 aa26.41■■□□□ 1.82
CLIP2-206ENST00000487091 INSRP06213 1382 aa26.41■■□□□ 1.82
CLIP2-206ENST00000487091 NHSQ6T4R5 1651 aa26.41■■□□□ 1.82
CLIP2-206ENST00000487091 RGPD2P0DJD1 1756 aa26.41■■□□□ 1.82
CLIP2-206ENST00000487091 CGNL1Q0VF96 1302 aa26.4■■□□□ 1.82
CLIP2-206ENST00000487091 FLT4P35916 1363 aa26.4■■□□□ 1.82
CLIP2-206ENST00000487091 KAT6BQ8WYB5 2073 aa26.4■■□□□ 1.82
CLIP2-206ENST00000487091 SMG6Q86US8 1419 aaKnown RBP26.39■■□□□ 1.82
CLIP2-206ENST00000487091 NBPF6Q5VWK0 638 aa26.39■■□□□ 1.82
CLIP2-206ENST00000487091 ACSBG1Q96GR2 724 aa26.39■■□□□ 1.82
CLIP2-206ENST00000487091 NBPF4Q96M43 638 aa26.39■■□□□ 1.82
CLIP2-206ENST00000487091 TXNRD1Q16881 649 aa26.38■■□□□ 1.81
CLIP2-206ENST00000487091 HSP90AB2PQ58FF8 381 aa26.38■■□□□ 1.81
CLIP2-206ENST00000487091 DDX54Q8TDD1 881 aaKnown RBP26.37■■□□□ 1.81
CLIP2-206ENST00000487091 ZCRB1Q8TBF4 217 aaKnown RBP26.36■■□□□ 1.81
CLIP2-206ENST00000487091 EMILIN1Q9Y6C2 1016 aa26.34■■□□□ 1.81
CLIP2-206ENST00000487091 MEGF6O75095 1541 aa26.34■■□□□ 1.81
CLIP2-206ENST00000487091 ANO8Q9HCE9 1232 aaPredicted RBP26.33■■□□□ 1.81
CLIP2-206ENST00000487091 RAPGEF4Q8WZA2 1011 aa26.32■■□□□ 1.8
CLIP2-206ENST00000487091 BTAF1O14981 1849 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms