RNA–Protein interactions for RNA: ENST00000486728.5

TNFRSF18-204, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF18, Length 727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-204ENST00000486728 SOX12O15370 315 aa27.6■■■□□ 2.01
TNFRSF18-204ENST00000486728 FAM196AQ6ZSG2 479 aa27.6■■■□□ 2.01
TNFRSF18-204ENST00000486728 A0A1W2PP64 1363 aa27.6■■■□□ 2.01
TNFRSF18-204ENST00000486728 USP54Q70EL1 1684 aa27.59■■■□□ 2.01
TNFRSF18-204ENST00000486728 ABCC6O95255 1503 aa27.59■■■□□ 2.01
TNFRSF18-204ENST00000486728 NME9Q86XW9 330 aa27.59■■■□□ 2.01
TNFRSF18-204ENST00000486728 RGPD1P0DJD0 1748 aa27.58■■■□□ 2.01
TNFRSF18-204ENST00000486728 TMF1P82094 1093 aa27.58■■■□□ 2.01
TNFRSF18-204ENST00000486728 TOM1L2Q6ZVM7 507 aa27.58■■■□□ 2.01
TNFRSF18-204ENST00000486728 DEFB132Q7Z7B7 95 aa27.58■■■□□ 2.01
TNFRSF18-204ENST00000486728 NFAT5O94916 1531 aa27.57■■■□□ 2
TNFRSF18-204ENST00000486728 WDR17Q8IZU2 1322 aa27.57■■■□□ 2
TNFRSF18-204ENST00000486728 C11orf95C9JLR9 678 aaPredicted RBP27.56■■■□□ 2
TNFRSF18-204ENST00000486728 FAM182BQ5T319 152 aa27.55■■■□□ 2
TNFRSF18-204ENST00000486728 LTN1O94822 1766 aa27.54■■■□□ 2
TNFRSF18-204ENST00000486728 CDCA8Q53HL2 280 aa27.54■■■□□ 2
TNFRSF18-204ENST00000486728 AXIN2Q9Y2T1 843 aa27.54■■■□□ 2
TNFRSF18-204ENST00000486728 CSB-PGBD3P0DP91 1061 aa27.53■■■□□ 2
TNFRSF18-204ENST00000486728 PARP4Q9UKK3 1724 aaKnown RBP27.53■■■□□ 2
TNFRSF18-204ENST00000486728 DISP2A7MBM2 1401 aa27.52■■■□□ 2
TNFRSF18-204ENST00000486728 CDCA7Q9BWT1 371 aaPredicted RBP27.52■■■□□ 2
TNFRSF18-204ENST00000486728 ANKRD36BQ8N2N9 1353 aa27.49■■□□□ 1.99
TNFRSF18-204ENST00000486728 CARD10Q9BWT7 1032 aa27.48■■□□□ 1.99
TNFRSF18-204ENST00000486728 OVOS2A0A0J9YW53 1432 aa27.48■■□□□ 1.99
TNFRSF18-204ENST00000486728 OVOS2Q6IE36 1432 aa27.48■■□□□ 1.99
TNFRSF18-204ENST00000486728 MYOM1P52179 1685 aa27.47■■□□□ 1.99
TNFRSF18-204ENST00000486728 CCDC7Q96M83 1385 aa27.47■■□□□ 1.99
TNFRSF18-204ENST00000486728 WNK3Q9BYP7 1800 aa27.46■■□□□ 1.99
TNFRSF18-204ENST00000486728 TRIM37O94972 964 aa27.46■■□□□ 1.99
TNFRSF18-204ENST00000486728 DDB1Q16531 1140 aa27.46■■□□□ 1.99
TNFRSF18-204ENST00000486728 TNS1Q9HBL0 1735 aaKnown RBP27.46■■□□□ 1.99
TNFRSF18-204ENST00000486728 OVOS2A0A0G2JMS6 1433 aa27.44■■□□□ 1.98
TNFRSF18-204ENST00000486728 EN1Q05925 392 aaPredicted RBP27.44■■□□□ 1.98
TNFRSF18-204ENST00000486728 COG3Q96JB2 828 aa27.44■■□□□ 1.98
TNFRSF18-204ENST00000486728 PARD3Q8TEW0 1356 aa27.44■■□□□ 1.98
TNFRSF18-204ENST00000486728 LRRC37A3O60309 1634 aa27.43■■□□□ 1.98
TNFRSF18-204ENST00000486728 ERBB3P21860 1342 aa27.42■■□□□ 1.98
TNFRSF18-204ENST00000486728 APBA3O96018 575 aa27.41■■□□□ 1.98
TNFRSF18-204ENST00000486728 KIF20BQ96Q89 1820 aa27.39■■□□□ 1.97
TNFRSF18-204ENST00000486728 EXOC5O00471 708 aa27.36■■□□□ 1.97
TNFRSF18-204ENST00000486728 FBLN1P23142 703 aa27.36■■□□□ 1.97
TNFRSF18-204ENST00000486728 EZH2Q15910 746 aaKnown RBP27.36■■□□□ 1.97
TNFRSF18-204ENST00000486728 ANKRD24Q8TF21 1146 aa27.36■■□□□ 1.97
TNFRSF18-204ENST00000486728 CAMKK2Q96RR4 588 aa27.36■■□□□ 1.97
TNFRSF18-204ENST00000486728 NLRP2Q9NX02 1062 aa27.36■■□□□ 1.97
TNFRSF18-204ENST00000486728 IP6K1Q92551 441 aa27.35■■□□□ 1.97
TNFRSF18-204ENST00000486728 HSPA5P11021 654 aaKnown RBP27.34■■□□□ 1.97
TNFRSF18-204ENST00000486728 BCL9O00512 1426 aa27.33■■□□□ 1.97
TNFRSF18-204ENST00000486728 PEAK1Q9H792 1746 aa27.33■■□□□ 1.97
TNFRSF18-204ENST00000486728 FYB1O15117 783 aa27.33■■□□□ 1.97
TNFRSF18-204ENST00000486728 EIF4G2P78344 907 aaKnown RBP eCLIP27.33■■□□□ 1.97
TNFRSF18-204ENST00000486728 CARD14Q9BXL6 1004 aa27.33■■□□□ 1.97
TNFRSF18-204ENST00000486728 GGNBP2Q9H3C7 697 aa27.32■■□□□ 1.96
TNFRSF18-204ENST00000486728 TNS2Q63HR2 1409 aa27.32■■□□□ 1.96
TNFRSF18-204ENST00000486728 SBF2Q86WG5 1849 aa27.31■■□□□ 1.96
TNFRSF18-204ENST00000486728 IL2RBP14784 551 aa27.3■■□□□ 1.96
TNFRSF18-204ENST00000486728 AMPHP49418 695 aa27.3■■□□□ 1.96
TNFRSF18-204ENST00000486728 POLR3GLQ9BT43 218 aa27.3■■□□□ 1.96
TNFRSF18-204ENST00000486728 RTL1A6NKG5 1358 aa27.3■■□□□ 1.96
TNFRSF18-204ENST00000486728 FAM208AQ9UK61 1670 aaKnown RBP27.3■■□□□ 1.96
TNFRSF18-204ENST00000486728 MARCH10Q8NA82 808 aaPredicted RBP27.29■■□□□ 1.96
TNFRSF18-204ENST00000486728 MAP3K19Q56UN5 1328 aa27.29■■□□□ 1.96
TNFRSF18-204ENST00000486728 RGPD2P0DJD1 1756 aa27.29■■□□□ 1.96
TNFRSF18-204ENST00000486728 BCL11BQ9C0K0 894 aaPredicted RBP27.28■■□□□ 1.96
TNFRSF18-204ENST00000486728 PSDA5PKW4 1024 aaPredicted RBP27.26■■□□□ 1.95
TNFRSF18-204ENST00000486728 HOXC9P31274 260 aa27.26■■□□□ 1.95
TNFRSF18-204ENST00000486728 NBPF14Q5TI25 921 aa27.26■■□□□ 1.95
TNFRSF18-204ENST00000486728 RREB1Q92766 1687 aa27.26■■□□□ 1.95
TNFRSF18-204ENST00000486728 NSD3Q9BZ95 1437 aa27.25■■□□□ 1.95
TNFRSF18-204ENST00000486728 PLSCR1O15162 318 aa27.24■■□□□ 1.95
TNFRSF18-204ENST00000486728 LTV1Q96GA3 475 aaPredicted RBP27.24■■□□□ 1.95
TNFRSF18-204ENST00000486728 RGPD3A6NKT7 1758 aaPredicted RBP27.24■■□□□ 1.95
TNFRSF18-204ENST00000486728 RGPD4Q7Z3J3 1758 aa27.24■■□□□ 1.95
TNFRSF18-204ENST00000486728 SRCAPQ6ZRS2 3230 aa27.24■■□□□ 1.95
TNFRSF18-204ENST00000486728 R3HDM1Q15032 1099 aaKnown RBP27.23■■□□□ 1.95
TNFRSF18-204ENST00000486728 RRS1Q15050 365 aaKnown RBP27.23■■□□□ 1.95
TNFRSF18-204ENST00000486728 LRP5O75197 1615 aa27.22■■□□□ 1.95
TNFRSF18-204ENST00000486728 SMG6Q86US8 1419 aaKnown RBP27.22■■□□□ 1.95
TNFRSF18-204ENST00000486728 KIF24Q5T7B8 1368 aa27.22■■□□□ 1.95
TNFRSF18-204ENST00000486728 NUP188Q5SRE5 1749 aa27.19■■□□□ 1.94
TNFRSF18-204ENST00000486728 CGNL1Q0VF96 1302 aa27.18■■□□□ 1.94
TNFRSF18-204ENST00000486728 MAP2P11137 1827 aaKnown RBP27.18■■□□□ 1.94
TNFRSF18-204ENST00000486728 PTF1AQ7RTS3 328 aa27.16■■□□□ 1.94
TNFRSF18-204ENST00000486728 FLT4P35916 1363 aa27.16■■□□□ 1.94
TNFRSF18-204ENST00000486728 ANKRD26Q9UPS8 1709 aa27.15■■□□□ 1.94
TNFRSF18-204ENST00000486728 INSRP06213 1382 aa27.13■■□□□ 1.93
TNFRSF18-204ENST00000486728 NHSQ6T4R5 1651 aa27.13■■□□□ 1.93
TNFRSF18-204ENST00000486728 PANK3Q9H999 370 aa27.12■■□□□ 1.93
TNFRSF18-204ENST00000486728 HSP90AB2PQ58FF8 381 aa27.1■■□□□ 1.93
TNFRSF18-204ENST00000486728 KAT6BQ8WYB5 2073 aa27.1■■□□□ 1.93
TNFRSF18-204ENST00000486728 ACSBG1Q96GR2 724 aa27.09■■□□□ 1.93
TNFRSF18-204ENST00000486728 EMILIN1Q9Y6C2 1016 aa27.09■■□□□ 1.93
TNFRSF18-204ENST00000486728 DDX54Q8TDD1 881 aaKnown RBP27.08■■□□□ 1.93
TNFRSF18-204ENST00000486728 SHANK3Q9BYB0 1731 aa27.07■■□□□ 1.92
TNFRSF18-204ENST00000486728 KCNQ2O43526 872 aa27.07■■□□□ 1.92
TNFRSF18-204ENST00000486728 NBPF6Q5VWK0 638 aa27.07■■□□□ 1.92
TNFRSF18-204ENST00000486728 ZCRB1Q8TBF4 217 aaKnown RBP27.07■■□□□ 1.92
TNFRSF18-204ENST00000486728 RAPGEF4Q8WZA2 1011 aa27.07■■□□□ 1.92
TNFRSF18-204ENST00000486728 NBPF4Q96M43 638 aa27.07■■□□□ 1.92
TNFRSF18-204ENST00000486728 USHBP1Q8N6Y0 703 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms