RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 ZRANB1Q9UGI0 708 aa22.28■■□□□ 1.16
HDAC8-218ENST00000486704 EIF4G2P78344 907 aaKnown RBP eCLIP22.27■■□□□ 1.16
HDAC8-218ENST00000486704 LARP1Q6PKG0 1096 aaKnown RBP22.27■■□□□ 1.16
HDAC8-218ENST00000486704 BARGINQ6ZT62 677 aa22.26■■□□□ 1.15
HDAC8-218ENST00000486704 KRT27Q7Z3Y8 459 aa22.26■■□□□ 1.15
HDAC8-218ENST00000486704 FAM208AQ9UK61 1670 aaKnown RBP22.25■■□□□ 1.15
HDAC8-218ENST00000486704 RGPD1P0DJD0 1748 aa22.25■■□□□ 1.15
HDAC8-218ENST00000486704 A0A0G2JS52 829 aa22.24■■□□□ 1.15
HDAC8-218ENST00000486704 ZBTB7CA1YPR0 619 aa22.24■■□□□ 1.15
HDAC8-218ENST00000486704 MYT1Q01538 1121 aa22.24■■□□□ 1.15
HDAC8-218ENST00000486704 CCDC125Q86Z20 511 aa22.24■■□□□ 1.15
HDAC8-218ENST00000486704 THRAP3Q9Y2W1 955 aaKnown RBP22.24■■□□□ 1.15
HDAC8-218ENST00000486704 LRRC37A3O60309 1634 aa22.24■■□□□ 1.15
HDAC8-218ENST00000486704 BLMP54132 1417 aaPredicted RBP22.23■■□□□ 1.15
HDAC8-218ENST00000486704 SOX12O15370 315 aa22.23■■□□□ 1.15
HDAC8-218ENST00000486704 HSPA5P11021 654 aaKnown RBP22.23■■□□□ 1.15
HDAC8-218ENST00000486704 TCP11L2Q8N4U5 519 aa22.23■■□□□ 1.15
HDAC8-218ENST00000486704 AXIN2Q9Y2T1 843 aa22.23■■□□□ 1.15
HDAC8-218ENST00000486704 WDR17Q8IZU2 1322 aa22.23■■□□□ 1.15
HDAC8-218ENST00000486704 TNS1Q9HBL0 1735 aaKnown RBP22.21■■□□□ 1.15
HDAC8-218ENST00000486704 ANKRD26Q9UPS8 1709 aa22.2■■□□□ 1.14
HDAC8-218ENST00000486704 USP35Q9P2H5 1018 aa22.2■■□□□ 1.14
HDAC8-218ENST00000486704 COG3Q96JB2 828 aa22.19■■□□□ 1.14
HDAC8-218ENST00000486704 NSD3Q9BZ95 1437 aa22.17■■□□□ 1.14
HDAC8-218ENST00000486704 PEAK1Q9H792 1746 aa22.17■■□□□ 1.14
HDAC8-218ENST00000486704 ERBB3P21860 1342 aa22.16■■□□□ 1.14
HDAC8-218ENST00000486704 FYB1O15117 783 aa22.16■■□□□ 1.14
HDAC8-218ENST00000486704 TOM1L2Q6ZVM7 507 aa22.16■■□□□ 1.14
HDAC8-218ENST00000486704 DISP2A7MBM2 1401 aa22.14■■□□□ 1.14
HDAC8-218ENST00000486704 CCDC7Q96M83 1385 aa22.14■■□□□ 1.14
HDAC8-218ENST00000486704 CARD10Q9BWT7 1032 aa22.14■■□□□ 1.13
HDAC8-218ENST00000486704 CARD14Q9BXL6 1004 aa22.14■■□□□ 1.13
HDAC8-218ENST00000486704 RTL1A6NKG5 1358 aa22.13■■□□□ 1.13
HDAC8-218ENST00000486704 SBF2Q86WG5 1849 aa22.13■■□□□ 1.13
HDAC8-218ENST00000486704 GGNBP2Q9H3C7 697 aa22.12■■□□□ 1.13
HDAC8-218ENST00000486704 CSB-PGBD3P0DP91 1061 aa22.11■■□□□ 1.13
HDAC8-218ENST00000486704 CDCA7Q9BWT1 371 aaPredicted RBP22.11■■□□□ 1.13
HDAC8-218ENST00000486704 MAP3K19Q56UN5 1328 aa22.1■■□□□ 1.13
HDAC8-218ENST00000486704 RGPD2P0DJD1 1756 aa22.1■■□□□ 1.13
HDAC8-218ENST00000486704 IP6K1Q92551 441 aa22.1■■□□□ 1.13
HDAC8-218ENST00000486704 PDE3BQ13370 1112 aa22.09■■□□□ 1.13
HDAC8-218ENST00000486704 SF3B2Q13435 895 aaKnown RBP22.08■■□□□ 1.13
HDAC8-218ENST00000486704 FAM182BQ5T319 152 aa22.08■■□□□ 1.13
HDAC8-218ENST00000486704 FAM196AQ6ZSG2 479 aa22.08■■□□□ 1.13
HDAC8-218ENST00000486704 ANKRD24Q8TF21 1146 aa22.08■■□□□ 1.13
HDAC8-218ENST00000486704 KIF24Q5T7B8 1368 aa22.08■■□□□ 1.12
HDAC8-218ENST00000486704 MAP2P11137 1827 aaKnown RBP22.08■■□□□ 1.12
HDAC8-218ENST00000486704 CGNL1Q0VF96 1302 aa22.07■■□□□ 1.12
HDAC8-218ENST00000486704 OVOS2A0A0G2JMS6 1433 aa22.07■■□□□ 1.12
HDAC8-218ENST00000486704 TNS2Q63HR2 1409 aa22.07■■□□□ 1.12
HDAC8-218ENST00000486704 C11orf95C9JLR9 678 aaPredicted RBP22.06■■□□□ 1.12
HDAC8-218ENST00000486704 HOXC9P31274 260 aa22.06■■□□□ 1.12
HDAC8-218ENST00000486704 POLR3GLQ9BT43 218 aa22.06■■□□□ 1.12
HDAC8-218ENST00000486704 RGPD3A6NKT7 1758 aaPredicted RBP22.05■■□□□ 1.12
HDAC8-218ENST00000486704 RGPD4Q7Z3J3 1758 aa22.05■■□□□ 1.12
HDAC8-218ENST00000486704 DDB1Q16531 1140 aa22.05■■□□□ 1.12
HDAC8-218ENST00000486704 BCL9O00512 1426 aa22.05■■□□□ 1.12
HDAC8-218ENST00000486704 AMPHP49418 695 aa22.03■■□□□ 1.12
HDAC8-218ENST00000486704 NLRP2Q9NX02 1062 aa22.03■■□□□ 1.12
HDAC8-218ENST00000486704 RREB1Q92766 1687 aa22.03■■□□□ 1.12
HDAC8-218ENST00000486704 FLT4P35916 1363 aa22.02■■□□□ 1.12
HDAC8-218ENST00000486704 FBLN1P23142 703 aa22.02■■□□□ 1.12
HDAC8-218ENST00000486704 BAG6P46379 1132 aa22.02■■□□□ 1.12
HDAC8-218ENST00000486704 RRS1Q15050 365 aaKnown RBP22.02■■□□□ 1.12
HDAC8-218ENST00000486704 DEFB132Q7Z7B7 95 aa22.02■■□□□ 1.12
HDAC8-218ENST00000486704 NSD2O96028 1365 aa22.01■■□□□ 1.11
HDAC8-218ENST00000486704 KIF7Q2M1P5 1343 aa22.01■■□□□ 1.11
HDAC8-218ENST00000486704 INSRP06213 1382 aa22■■□□□ 1.11
HDAC8-218ENST00000486704 SHANK3Q9BYB0 1731 aa22■■□□□ 1.11
HDAC8-218ENST00000486704 SMG6Q86US8 1419 aaKnown RBP22■■□□□ 1.11
HDAC8-218ENST00000486704 PANK3Q9H999 370 aa22■■□□□ 1.11
HDAC8-218ENST00000486704 NHSQ6T4R5 1651 aa21.98■■□□□ 1.11
HDAC8-218ENST00000486704 TRIM37O94972 964 aa21.98■■□□□ 1.11
HDAC8-218ENST00000486704 IL2RBP14784 551 aa21.98■■□□□ 1.11
HDAC8-218ENST00000486704 PARD3Q8TEW0 1356 aa21.98■■□□□ 1.11
HDAC8-218ENST00000486704 NUP188Q5SRE5 1749 aa21.97■■□□□ 1.11
HDAC8-218ENST00000486704 EXOC5O00471 708 aa21.96■■□□□ 1.11
HDAC8-218ENST00000486704 MARCH10Q8NA82 808 aaPredicted RBP21.96■■□□□ 1.11
HDAC8-218ENST00000486704 LTV1Q96GA3 475 aaPredicted RBP21.96■■□□□ 1.11
HDAC8-218ENST00000486704 MEGF6O75095 1541 aa21.93■■□□□ 1.1
HDAC8-218ENST00000486704 NCAPD2Q15021 1401 aa21.93■■□□□ 1.1
HDAC8-218ENST00000486704 EMILIN1Q9Y6C2 1016 aa21.93■■□□□ 1.1
HDAC8-218ENST00000486704 EN1Q05925 392 aaPredicted RBP21.92■■□□□ 1.1
HDAC8-218ENST00000486704 HSP90AB2PQ58FF8 381 aa21.92■■□□□ 1.1
HDAC8-218ENST00000486704 PKD1L3Q7Z443 1732 aa21.91■■□□□ 1.1
HDAC8-218ENST00000486704 WASHC2AQ641Q2 1341 aa21.9■■□□□ 1.1
HDAC8-218ENST00000486704 APBA3O96018 575 aa21.9■■□□□ 1.1
HDAC8-218ENST00000486704 CAMKK2Q96RR4 588 aa21.9■■□□□ 1.1
HDAC8-218ENST00000486704 NBPF6Q5VWK0 638 aa21.89■■□□□ 1.09
HDAC8-218ENST00000486704 NBPF4Q96M43 638 aa21.89■■□□□ 1.09
HDAC8-218ENST00000486704 POLKQ9UBT6 870 aa21.89■■□□□ 1.09
HDAC8-218ENST00000486704 KNSTRNQ9Y448 316 aa21.89■■□□□ 1.09
HDAC8-218ENST00000486704 BTAF1O14981 1849 aa21.89■■□□□ 1.09
HDAC8-218ENST00000486704 DOT1LQ8TEK3 1739 aa21.89■■□□□ 1.09
HDAC8-218ENST00000486704 BCL11BQ9C0K0 894 aaPredicted RBP21.88■■□□□ 1.09
HDAC8-218ENST00000486704 EZH2Q15910 746 aaKnown RBP21.87■■□□□ 1.09
HDAC8-218ENST00000486704 AMER1Q5JTC6 1135 aaPredicted RBP21.86■■□□□ 1.09
HDAC8-218ENST00000486704 KAT6BQ8WYB5 2073 aa21.84■■□□□ 1.09
HDAC8-218ENST00000486704 PLSCR1O15162 318 aa21.84■■□□□ 1.09
HDAC8-218ENST00000486704 PPM1GO15355 546 aaPredicted RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms