RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 ITPKCQ96DU7 683 aa10.08□□□□□ -0.8
GCFC2-209ENST00000486016 OCSTAMPQ9BR26 566 aa10.08□□□□□ -0.8
GCFC2-209ENST00000486016 ZFAND3Q9H8U3 227 aa10.08□□□□□ -0.8
GCFC2-209ENST00000486016 FKBPLQ9UIM3 349 aa10.08□□□□□ -0.8
GCFC2-209ENST00000486016 GDF11O95390 407 aa10.07□□□□□ -0.8
GCFC2-209ENST00000486016 ZIC2O95409 532 aaPredicted RBP10.07□□□□□ -0.8
GCFC2-209ENST00000486016 NR6A1Q15406 480 aa10.07□□□□□ -0.8
GCFC2-209ENST00000486016 ERFEQ4G0M1 354 aa10.07□□□□□ -0.8
GCFC2-209ENST00000486016 GOPCQ9HD26 462 aa10.07□□□□□ -0.8
GCFC2-209ENST00000486016 RASSF7Q02833 373 aa10.06□□□□□ -0.8
GCFC2-209ENST00000486016 MAGEB6P1A0A0J9YX57 407 aa10.05□□□□□ -0.8
GCFC2-209ENST00000486016 EPS8L1Q8TE68 723 aa10.05□□□□□ -0.8
GCFC2-209ENST00000486016 HMX1Q9NP08 348 aaPredicted RBP10.05□□□□□ -0.8
GCFC2-209ENST00000486016 AP1G2O75843 785 aa10.04□□□□□ -0.8
GCFC2-209ENST00000486016 ZC3H4Q9UPT8 1303 aaKnown RBP10.04□□□□□ -0.8
GCFC2-209ENST00000486016 RFC5P40937 340 aa10.03□□□□□ -0.8
GCFC2-209ENST00000486016 VASH1Q7L8A9 365 aaPredicted RBP10.03□□□□□ -0.8
GCFC2-209ENST00000486016 CARD14Q9BXL6 1004 aa10.03□□□□□ -0.8
GCFC2-209ENST00000486016 RNF225M0QZC1 329 aaPredicted RBP10.02□□□□□ -0.81
GCFC2-209ENST00000486016 FSHRP23945 695 aa10.02□□□□□ -0.81
GCFC2-209ENST00000486016 ARHGAP9Q9BRR9 750 aa10.02□□□□□ -0.81
GCFC2-209ENST00000486016 ADAMTS8Q9UP79 889 aa10.02□□□□□ -0.81
GCFC2-209ENST00000486016 USP17L8P0C7I0 530 aa10.01□□□□□ -0.81
GCFC2-209ENST00000486016 BMP2P12643 396 aa10.01□□□□□ -0.81
GCFC2-209ENST00000486016 MEIOBQ8N635 442 aa10.01□□□□□ -0.81
GCFC2-209ENST00000486016 CNTNAP3BQ96NU0 1288 aa10.01□□□□□ -0.81
GCFC2-209ENST00000486016 CNTNAP3Q9BZ76 1288 aa10.01□□□□□ -0.81
GCFC2-209ENST00000486016 UPP2O95045 317 aa10□□□□□ -0.81
GCFC2-209ENST00000486016 KRT76Q01546 638 aa10□□□□□ -0.81
GCFC2-209ENST00000486016 GPR161Q8N6U8 529 aaKnown RBP10□□□□□ -0.81
GCFC2-209ENST00000486016 GPSM3Q9Y4H4 160 aa10□□□□□ -0.81
GCFC2-209ENST00000486016 BRPF1P55201 1214 aaPredicted RBP9.99□□□□□ -0.81
GCFC2-209ENST00000486016 CCDC116Q8IYX3 515 aa9.99□□□□□ -0.81
GCFC2-209ENST00000486016 LINC00528Q8N1L1 170 aa9.99□□□□□ -0.81
GCFC2-209ENST00000486016 TRIM34Q9BYJ4 488 aa9.99□□□□□ -0.81
GCFC2-209ENST00000486016 NEUROD2Q15784 382 aa9.98□□□□□ -0.81
GCFC2-209ENST00000486016 EMILIN1Q9Y6C2 1016 aa9.98□□□□□ -0.81
GCFC2-209ENST00000486016 SOS2Q07890 1332 aaPredicted RBP9.98□□□□□ -0.81
GCFC2-209ENST00000486016 PTK2Q05397 1052 aa9.97□□□□□ -0.81
GCFC2-209ENST00000486016 IL27Q8NEV9 243 aa9.97□□□□□ -0.81
GCFC2-209ENST00000486016 KCTD15Q96SI1 283 aaPredicted RBP9.97□□□□□ -0.81
GCFC2-209ENST00000486016 DNMT3LQ9UJW3 386 aa9.97□□□□□ -0.81
GCFC2-209ENST00000486016 ATP1B4Q9UN42 357 aaPredicted RBP9.97□□□□□ -0.81
GCFC2-209ENST00000486016 PPP1R26Q5T8A7 1209 aaPredicted RBP9.96□□□□□ -0.82
GCFC2-209ENST00000486016 ADAM32Q8TC27 787 aa9.96□□□□□ -0.82
GCFC2-209ENST00000486016 PCMTD1Q96MG8 357 aaPredicted RBP9.96□□□□□ -0.82
GCFC2-209ENST00000486016 CDV3Q9UKY7 258 aaKnown RBP9.96□□□□□ -0.82
GCFC2-209ENST00000486016 Q6ZVU0 165 aa9.95□□□□□ -0.82
GCFC2-209ENST00000486016 TMEM259Q4ZIN3 620 aa9.94□□□□□ -0.82
GCFC2-209ENST00000486016 ZBTB33Q86T24 672 aa9.94□□□□□ -0.82
GCFC2-209ENST00000486016 SLC10A4Q96EP9 437 aa9.94□□□□□ -0.82
GCFC2-209ENST00000486016 INTS6LQ5JSJ4 861 aaKnown RBP9.93□□□□□ -0.82
GCFC2-209ENST00000486016 GPAT2Q6NUI2 795 aa9.93□□□□□ -0.82
GCFC2-209ENST00000486016 GJD4Q96KN9 370 aaPredicted RBP9.93□□□□□ -0.82
GCFC2-209ENST00000486016 TSEN34Q9BSV6 310 aaKnown RBP9.93□□□□□ -0.82
GCFC2-209ENST00000486016 COL25A1Q9BXS0 654 aaPredicted RBP9.93□□□□□ -0.82
GCFC2-209ENST00000486016 CBLBQ13191 982 aa9.92□□□□□ -0.82
GCFC2-209ENST00000486016 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.92□□□□□ -0.82
GCFC2-209ENST00000486016 IRS1P35568 1242 aa9.91□□□□□ -0.82
GCFC2-209ENST00000486016 ZNF385CQ66K41 422 aaPredicted RBP9.91□□□□□ -0.82
GCFC2-209ENST00000486016 SVOPQ8N4V2 548 aa9.91□□□□□ -0.82
GCFC2-209ENST00000486016 PGPEP1Q9NXJ5 209 aa9.9□□□□□ -0.82
GCFC2-209ENST00000486016 ESPNB1AK53 854 aa9.89□□□□□ -0.83
GCFC2-209ENST00000486016 PTSQ03393 145 aa9.89□□□□□ -0.83
GCFC2-209ENST00000486016 DHX9Q08211 1270 aaKnown RBP9.89□□□□□ -0.83
GCFC2-209ENST00000486016 NANOS1Q8WY41 292 aaKnown RBP9.89□□□□□ -0.83
GCFC2-209ENST00000486016 DNMT3AQ9Y6K1 912 aaPredicted RBP9.89□□□□□ -0.83
GCFC2-209ENST00000486016 FIGNL2A6NMB9 653 aa9.88□□□□□ -0.83
GCFC2-209ENST00000486016 SPINT1O43278 529 aa9.88□□□□□ -0.83
GCFC2-209ENST00000486016 IGHA1P01876 353 aa9.88□□□□□ -0.83
GCFC2-209ENST00000486016 PNMA1Q8ND90 353 aa9.88□□□□□ -0.83
GCFC2-209ENST00000486016 TTLL8A6PVC2 850 aa9.87□□□□□ -0.83
GCFC2-209ENST00000486016 RNFT1Q5M7Z0 435 aa9.87□□□□□ -0.83
GCFC2-209ENST00000486016 WHAMMQ8TF30 809 aa9.87□□□□□ -0.83
GCFC2-209ENST00000486016 GPR37L1O60883 481 aa9.86□□□□□ -0.83
GCFC2-209ENST00000486016 LILRA1O75019 489 aa9.86□□□□□ -0.83
GCFC2-209ENST00000486016 NBPF20Q3BBV1 942 aa9.86□□□□□ -0.83
GCFC2-209ENST00000486016 KDF1Q8NAX2 398 aaPredicted RBP9.85□□□□□ -0.83
GCFC2-209ENST00000486016 TMPRSS4Q9NRS4 437 aa9.85□□□□□ -0.83
GCFC2-209ENST00000486016 ERVH48-1M5A8F1 160 aa9.84□□□□□ -0.83
GCFC2-209ENST00000486016 SOCS7O14512 581 aa9.84□□□□□ -0.83
GCFC2-209ENST00000486016 SLURP2P0DP57 97 aa9.84□□□□□ -0.83
GCFC2-209ENST00000486016 ADD1P35611 737 aaKnown RBP9.84□□□□□ -0.83
GCFC2-209ENST00000486016 MARSP56192 900 aaKnown RBP9.84□□□□□ -0.83
GCFC2-209ENST00000486016 TPRNQ4KMQ1 711 aa9.84□□□□□ -0.83
GCFC2-209ENST00000486016 DZIP3Q86Y13 1208 aaKnown RBP9.84□□□□□ -0.83
GCFC2-209ENST00000486016 CCDC155Q8N6L0 562 aa9.84□□□□□ -0.83
GCFC2-209ENST00000486016 AGBL1Q96MI9 1066 aa9.84□□□□□ -0.83
GCFC2-209ENST00000486016 ARHGEF15O94989 841 aa9.83□□□□□ -0.84
GCFC2-209ENST00000486016 FBXO45P0C2W1 286 aa9.83□□□□□ -0.84
GCFC2-209ENST00000486016 FOXK2Q01167 660 aa9.83□□□□□ -0.84
GCFC2-209ENST00000486016 KANK3Q6NY19 840 aa9.83□□□□□ -0.84
GCFC2-209ENST00000486016 ZNF784Q8NCA9 323 aaPredicted RBP9.83□□□□□ -0.84
GCFC2-209ENST00000486016 BANK1Q8NDB2 785 aa9.83□□□□□ -0.84
GCFC2-209ENST00000486016 ZBBXA8MT70 800 aa9.82□□□□□ -0.84
GCFC2-209ENST00000486016 MTMR14Q8NCE2 650 aa9.82□□□□□ -0.84
GCFC2-209ENST00000486016 SEPT12Q8IYM1 358 aa9.81□□□□□ -0.84
GCFC2-209ENST00000486016 VWA5B2Q8N398 1253 aa9.81□□□□□ -0.84
GCFC2-209ENST00000486016 CDC14CA4D256 554 aa9.8□□□□□ -0.84
GCFC2-209ENST00000486016 SLC35F4A4IF30 521 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms