RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 OVOS2A0A0G2JMS6 1433 aa28.99■■■□□ 2.23
CHRD-215ENST00000485883 OVOS2A0A0J9YW53 1432 aa28.99■■■□□ 2.23
CHRD-215ENST00000485883 OVOS2Q6IE36 1432 aa28.99■■■□□ 2.23
CHRD-215ENST00000485883 NUP188Q5SRE5 1749 aa28.99■■■□□ 2.23
CHRD-215ENST00000485883 PEAK1Q9H792 1746 aa28.98■■■□□ 2.23
CHRD-215ENST00000485883 PTF1AQ7RTS3 328 aa28.98■■■□□ 2.23
CHRD-215ENST00000485883 CARD11Q9BXL7 1154 aa28.97■■■□□ 2.23
CHRD-215ENST00000485883 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.96■■■□□ 2.23
CHRD-215ENST00000485883 NFAT5O94916 1531 aa28.95■■■□□ 2.23
CHRD-215ENST00000485883 C11orf95C9JLR9 678 aaPredicted RBP28.95■■■□□ 2.22
CHRD-215ENST00000485883 CSB-PGBD3P0DP91 1061 aa28.95■■■□□ 2.22
CHRD-215ENST00000485883 NBPF14Q5TI25 921 aa28.95■■■□□ 2.22
CHRD-215ENST00000485883 MARCH10Q8NA82 808 aaPredicted RBP28.95■■■□□ 2.22
CHRD-215ENST00000485883 RGPD5Q99666 1765 aa28.94■■■□□ 2.22
CHRD-215ENST00000485883 SBNO2Q9Y2G9 1366 aa28.94■■■□□ 2.22
CHRD-215ENST00000485883 CARD10Q9BWT7 1032 aa28.94■■■□□ 2.22
CHRD-215ENST00000485883 CD163L1Q9NR16 1453 aa28.91■■■□□ 2.22
CHRD-215ENST00000485883 NME9Q86XW9 330 aa28.91■■■□□ 2.22
CHRD-215ENST00000485883 MON2Q7Z3U7 1717 aa28.9■■■□□ 2.22
CHRD-215ENST00000485883 TMC1Q8TDI8 760 aa28.9■■■□□ 2.22
CHRD-215ENST00000485883 CDCA7Q9BWT1 371 aaPredicted RBP28.9■■■□□ 2.22
CHRD-215ENST00000485883 SBF2Q86WG5 1849 aa28.9■■■□□ 2.22
CHRD-215ENST00000485883 WNK3Q9BYP7 1800 aa28.9■■■□□ 2.22
CHRD-215ENST00000485883 PLSCR1O15162 318 aa28.89■■■□□ 2.22
CHRD-215ENST00000485883 BCL11BQ9C0K0 894 aaPredicted RBP28.89■■■□□ 2.22
CHRD-215ENST00000485883 SLC12A5Q9H2X9 1139 aa28.89■■■□□ 2.22
CHRD-215ENST00000485883 USP31Q70CQ4 1352 aa28.88■■■□□ 2.21
CHRD-215ENST00000485883 TRIM26Q12899 539 aaPredicted RBP28.86■■■□□ 2.21
CHRD-215ENST00000485883 PROM2Q8N271 834 aa28.85■■■□□ 2.21
CHRD-215ENST00000485883 ANO8Q9HCE9 1232 aaPredicted RBP28.85■■■□□ 2.21
CHRD-215ENST00000485883 TONSLQ96HA7 1378 aa28.85■■■□□ 2.21
CHRD-215ENST00000485883 EXOC5O00471 708 aa28.84■■■□□ 2.21
CHRD-215ENST00000485883 BCL9O00512 1426 aa28.84■■■□□ 2.21
CHRD-215ENST00000485883 CCDC7Q96M83 1385 aa28.83■■■□□ 2.21
CHRD-215ENST00000485883 HDGFL2Q7Z4V5 671 aaPredicted RBP28.82■■■□□ 2.2
CHRD-215ENST00000485883 ABCC6O95255 1503 aa28.8■■■□□ 2.2
CHRD-215ENST00000485883 ERBB3P21860 1342 aa28.8■■■□□ 2.2
CHRD-215ENST00000485883 RGPD3A6NKT7 1758 aaPredicted RBP28.8■■■□□ 2.2
CHRD-215ENST00000485883 RGPD4Q7Z3J3 1758 aa28.8■■■□□ 2.2
CHRD-215ENST00000485883 A0A1W2PP64 1363 aa28.79■■■□□ 2.2
CHRD-215ENST00000485883 KCNQ2O43526 872 aa28.79■■■□□ 2.2
CHRD-215ENST00000485883 SPON1Q9HCB6 807 aa28.79■■■□□ 2.2
CHRD-215ENST00000485883 NLRP2Q9NX02 1062 aa28.79■■■□□ 2.2
CHRD-215ENST00000485883 USP54Q70EL1 1684 aa28.78■■■□□ 2.2
CHRD-215ENST00000485883 PDGFDQ9GZP0 370 aaPredicted RBP28.78■■■□□ 2.2
CHRD-215ENST00000485883 TNS2Q63HR2 1409 aa28.77■■■□□ 2.2
CHRD-215ENST00000485883 EDC4Q6P2E9 1401 aaKnown RBP28.77■■■□□ 2.2
CHRD-215ENST00000485883 TERF2IPQ9NYB0 399 aa28.76■■■□□ 2.19
CHRD-215ENST00000485883 ANKRD24Q8TF21 1146 aa28.75■■■□□ 2.19
CHRD-215ENST00000485883 TESK2Q96S53 571 aa28.75■■■□□ 2.19
CHRD-215ENST00000485883 TXNRD1Q16881 649 aa28.74■■■□□ 2.19
CHRD-215ENST00000485883 PPP1R1BQ9UD71 204 aaPredicted RBP28.74■■■□□ 2.19
CHRD-215ENST00000485883 LTN1O94822 1766 aa28.73■■■□□ 2.19
CHRD-215ENST00000485883 ST20-MTHFSA0A0A6YYL1 179 aa28.73■■■□□ 2.19
CHRD-215ENST00000485883 ACSBG1Q96GR2 724 aa28.73■■■□□ 2.19
CHRD-215ENST00000485883 PUS7Q96PZ0 661 aaKnown RBP28.73■■■□□ 2.19
CHRD-215ENST00000485883 IL2RBP14784 551 aa28.72■■■□□ 2.19
CHRD-215ENST00000485883 CASZ1Q86V15 1759 aa28.67■■■□□ 2.18
CHRD-215ENST00000485883 ZBTB7AO95365 584 aa28.67■■■□□ 2.18
CHRD-215ENST00000485883 FBLN1P23142 703 aa28.66■■■□□ 2.18
CHRD-215ENST00000485883 IP6K1Q92551 441 aa28.66■■■□□ 2.18
CHRD-215ENST00000485883 LTV1Q96GA3 475 aaPredicted RBP28.66■■■□□ 2.18
CHRD-215ENST00000485883 STK32BQ9NY57 414 aa28.65■■■□□ 2.18
CHRD-215ENST00000485883 SLC15A2Q16348 729 aa28.64■■■□□ 2.18
CHRD-215ENST00000485883 NHSQ6T4R5 1651 aa28.64■■■□□ 2.17
CHRD-215ENST00000485883 ATF5Q9Y2D1 282 aaPredicted RBP28.62■■■□□ 2.17
CHRD-215ENST00000485883 NINLQ9Y2I6 1382 aa28.62■■■□□ 2.17
CHRD-215ENST00000485883 PTGER2P43116 358 aa28.61■■■□□ 2.17
CHRD-215ENST00000485883 COG3Q96JB2 828 aa28.61■■■□□ 2.17
CHRD-215ENST00000485883 MAP3K19Q56UN5 1328 aa28.61■■■□□ 2.17
CHRD-215ENST00000485883 HOXC9P31274 260 aa28.58■■■□□ 2.17
CHRD-215ENST00000485883 DDX54Q8TDD1 881 aaKnown RBP28.57■■■□□ 2.16
CHRD-215ENST00000485883 YY1P25490 414 aa28.56■■■□□ 2.16
CHRD-215ENST00000485883 ANKRD36BQ8N2N9 1353 aa28.55■■■□□ 2.16
CHRD-215ENST00000485883 AMPHP49418 695 aa28.55■■■□□ 2.16
CHRD-215ENST00000485883 LRRC4BQ9NT99 713 aa28.55■■■□□ 2.16
CHRD-215ENST00000485883 KAT6BQ8WYB5 2073 aa28.55■■■□□ 2.16
CHRD-215ENST00000485883 BTAF1O14981 1849 aa28.55■■■□□ 2.16
CHRD-215ENST00000485883 SLC24A1O60721 1099 aa28.53■■■□□ 2.16
CHRD-215ENST00000485883 MYOM1P52179 1685 aa28.53■■■□□ 2.16
CHRD-215ENST00000485883 RRS1Q15050 365 aaKnown RBP28.52■■■□□ 2.16
CHRD-215ENST00000485883 ZNF827Q17R98 1081 aa28.52■■■□□ 2.16
CHRD-215ENST00000485883 GGNBP2Q9H3C7 697 aa28.52■■■□□ 2.16
CHRD-215ENST00000485883 USP47Q96K76 1375 aa28.51■■■□□ 2.16
CHRD-215ENST00000485883 PAPPAQ13219 1627 aa28.51■■■□□ 2.15
CHRD-215ENST00000485883 FYB1O15117 783 aa28.51■■■□□ 2.15
CHRD-215ENST00000485883 TMF1P82094 1093 aa28.51■■■□□ 2.15
CHRD-215ENST00000485883 MTFR1LQ9H019 292 aa28.51■■■□□ 2.15
CHRD-215ENST00000485883 SGIP1Q9BQI5 828 aa28.5■■■□□ 2.15
CHRD-215ENST00000485883 FAM208AQ9UK61 1670 aaKnown RBP28.48■■■□□ 2.15
CHRD-215ENST00000485883 DCAF8L1A6NGE4 600 aa28.48■■■□□ 2.15
CHRD-215ENST00000485883 RGPD2P0DJD1 1756 aa28.47■■■□□ 2.15
CHRD-215ENST00000485883 FHDC1Q9C0D6 1143 aaPredicted RBP28.47■■■□□ 2.15
CHRD-215ENST00000485883 MEGF6O75095 1541 aa28.47■■■□□ 2.15
CHRD-215ENST00000485883 PRIM1P49642 420 aaKnown RBP28.46■■■□□ 2.15
CHRD-215ENST00000485883 NBPF6Q5VWK0 638 aa28.46■■■□□ 2.15
CHRD-215ENST00000485883 SYTL4Q96C24 671 aaPredicted RBP28.46■■■□□ 2.15
CHRD-215ENST00000485883 NBPF4Q96M43 638 aa28.46■■■□□ 2.15
CHRD-215ENST00000485883 KCNQ4P56696 695 aa28.45■■■□□ 2.14
CHRD-215ENST00000485883 USHBP1Q8N6Y0 703 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms