RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 PURBQ96QR8 312 aaKnown RBP6.87□□□□□ -1.31
RTN4-213ENST00000485749 NUTM2BA6NNL0 878 aaPredicted RBP6.86□□□□□ -1.31
RTN4-213ENST00000485749 NUTM2EB1AL46 878 aaPredicted RBP6.86□□□□□ -1.31
RTN4-213ENST00000485749 F12P00748 615 aaPredicted RBP6.86□□□□□ -1.31
RTN4-213ENST00000485749 HSP90B1P14625 803 aaKnown RBP6.86□□□□□ -1.31
RTN4-213ENST00000485749 NUTM2DQ5VT03 806 aaPredicted RBP6.86□□□□□ -1.31
RTN4-213ENST00000485749 NUTM2AQ8IVF1 878 aaPredicted RBP6.86□□□□□ -1.31
RTN4-213ENST00000485749 POM121Q96HA1 1249 aa6.86□□□□□ -1.31
RTN4-213ENST00000485749 CFAP99D6REC4 459 aa6.85□□□□□ -1.31
RTN4-213ENST00000485749 SOCS7O14512 581 aa6.85□□□□□ -1.31
RTN4-213ENST00000485749 ZIC2O95409 532 aaPredicted RBP6.85□□□□□ -1.31
RTN4-213ENST00000485749 TUSC1Q2TAM9 212 aa6.85□□□□□ -1.31
RTN4-213ENST00000485749 TMEM259Q4ZIN3 620 aa6.85□□□□□ -1.31
RTN4-213ENST00000485749 LCE2CQ5TA81 110 aa6.85□□□□□ -1.31
RTN4-213ENST00000485749 PROCA1Q8NCQ7 364 aaPredicted RBP6.85□□□□□ -1.31
RTN4-213ENST00000485749 TSC1Q92574 1164 aa6.85□□□□□ -1.31
RTN4-213ENST00000485749 GPKOWQ92917 476 aaPredicted RBP eCLIP6.85□□□□□ -1.31
RTN4-213ENST00000485749 COG6Q9Y2V7 657 aa6.85□□□□□ -1.31
RTN4-213ENST00000485749 PATL2C9JE40 543 aaKnown RBP6.84□□□□□ -1.31
RTN4-213ENST00000485749 VSIG8P0DPA2 414 aa6.84□□□□□ -1.31
RTN4-213ENST00000485749 WWC1Q8IX03 1113 aa6.84□□□□□ -1.31
RTN4-213ENST00000485749 MAP10Q9P2G4 905 aa6.84□□□□□ -1.31
RTN4-213ENST00000485749 BMP2P12643 396 aa6.83□□□□□ -1.32
RTN4-213ENST00000485749 VEGFBP49765 207 aa6.83□□□□□ -1.32
RTN4-213ENST00000485749 MYSM1Q5VVJ2 828 aa6.83□□□□□ -1.32
RTN4-213ENST00000485749 FOXJ1Q92949 421 aa6.83□□□□□ -1.32
RTN4-213ENST00000485749 ZNF330Q9Y3S2 320 aaPredicted RBP6.83□□□□□ -1.32
RTN4-213ENST00000485749 MAP4K5Q9Y4K4 846 aa6.83□□□□□ -1.32
RTN4-213ENST00000485749 PCDHB15Q9Y5E8 787 aa6.83□□□□□ -1.32
RTN4-213ENST00000485749 EMILIN1Q9Y6C2 1016 aa6.83□□□□□ -1.32
RTN4-213ENST00000485749 CSPP1Q1MSJ5 1256 aa6.82□□□□□ -1.32
RTN4-213ENST00000485749 PPP2R2DQ66LE6 453 aa6.82□□□□□ -1.32
RTN4-213ENST00000485749 AEBP1Q8IUX7 1158 aa6.82□□□□□ -1.32
RTN4-213ENST00000485749 ITPKCQ96DU7 683 aa6.82□□□□□ -1.32
RTN4-213ENST00000485749 TSEN34Q9BSV6 310 aaKnown RBP6.82□□□□□ -1.32
RTN4-213ENST00000485749 KLF16Q9BXK1 252 aaPredicted RBP6.82□□□□□ -1.32
RTN4-213ENST00000485749 POLR3EQ9NVU0 708 aa6.82□□□□□ -1.32
RTN4-213ENST00000485749 ATP1B4Q9UN42 357 aaPredicted RBP6.82□□□□□ -1.32
RTN4-213ENST00000485749 ACIN1Q9UKV3 1341 aaKnown RBP6.81□□□□□ -1.32
RTN4-213ENST00000485749 RFC5P40937 340 aa6.81□□□□□ -1.32
RTN4-213ENST00000485749 CLK2P49760 499 aaKnown RBP6.81□□□□□ -1.32
RTN4-213ENST00000485749 C6orf118Q5T5N4 469 aa6.81□□□□□ -1.32
RTN4-213ENST00000485749 VASH1Q7L8A9 365 aaPredicted RBP6.81□□□□□ -1.32
RTN4-213ENST00000485749 LINC00528Q8N1L1 170 aa6.81□□□□□ -1.32
RTN4-213ENST00000485749 RETREG2Q8NC44 543 aa6.81□□□□□ -1.32
RTN4-213ENST00000485749 RGS22Q8NE09 1264 aa6.81□□□□□ -1.32
RTN4-213ENST00000485749 CDV3Q9UKY7 258 aaKnown RBP6.81□□□□□ -1.32
RTN4-213ENST00000485749 ERBB4Q15303 1308 aa6.8□□□□□ -1.32
RTN4-213ENST00000485749 TMCO4Q5TGY1 634 aa6.8□□□□□ -1.32
RTN4-213ENST00000485749 TRMT44Q8IYL2 757 aaKnown RBP6.8□□□□□ -1.32
RTN4-213ENST00000485749 MEIOBQ8N635 442 aa6.8□□□□□ -1.32
RTN4-213ENST00000485749 ZFAND3Q9H8U3 227 aa6.8□□□□□ -1.32
RTN4-213ENST00000485749 PRM3Q9NNZ6 103 aa6.8□□□□□ -1.32
RTN4-213ENST00000485749 FSHRP23945 695 aa6.79□□□□□ -1.32
RTN4-213ENST00000485749 GRM5P41594 1212 aa6.79□□□□□ -1.32
RTN4-213ENST00000485749 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.79□□□□□ -1.32
RTN4-213ENST00000485749 CCDC116Q8IYX3 515 aa6.79□□□□□ -1.32
RTN4-213ENST00000485749 CABLES1Q8TDN4 633 aa6.79□□□□□ -1.32
RTN4-213ENST00000485749 TRIM52Q96A61 297 aa6.79□□□□□ -1.32
RTN4-213ENST00000485749 CHMP4AQ9BY43 222 aa6.79□□□□□ -1.32
RTN4-213ENST00000485749 SNRKQ9NRH2 765 aa6.79□□□□□ -1.32
RTN4-213ENST00000485749 PGPEP1Q9NXJ5 209 aa6.79□□□□□ -1.32
RTN4-213ENST00000485749 LILRB3O75022 631 aa6.78□□□□□ -1.32
RTN4-213ENST00000485749 SH3RF1Q7Z6J0 888 aa6.78□□□□□ -1.32
RTN4-213ENST00000485749 C1QTNF2Q9BXJ5 285 aa6.78□□□□□ -1.32
RTN4-213ENST00000485749 MAGEB6P1A0A0J9YX57 407 aa6.77□□□□□ -1.33
RTN4-213ENST00000485749 RNF225M0QZC1 329 aaPredicted RBP6.77□□□□□ -1.33
RTN4-213ENST00000485749 NR3C2P08235 984 aa6.77□□□□□ -1.33
RTN4-213ENST00000485749 DHX9Q08211 1270 aaKnown RBP6.77□□□□□ -1.33
RTN4-213ENST00000485749 LIMD1Q9UGP4 676 aa6.77□□□□□ -1.33
RTN4-213ENST00000485749 PER1O15534 1290 aaPredicted RBP6.76□□□□□ -1.33
RTN4-213ENST00000485749 PPFIA3O75145 1194 aa6.76□□□□□ -1.33
RTN4-213ENST00000485749 BRD2P25440 801 aaKnown RBP6.76□□□□□ -1.33
RTN4-213ENST00000485749 IRF5Q13568 498 aa6.76□□□□□ -1.33
RTN4-213ENST00000485749 C4orf48Q5BLP8 95 aa6.76□□□□□ -1.33
RTN4-213ENST00000485749 SH3BP5LQ7L8J4 393 aa6.76□□□□□ -1.33
RTN4-213ENST00000485749 PNMA1Q8ND90 353 aa6.76□□□□□ -1.33
RTN4-213ENST00000485749 GZF1Q9H116 711 aaPredicted RBP6.76□□□□□ -1.33
RTN4-213ENST00000485749 SOS2Q07890 1332 aaPredicted RBP6.76□□□□□ -1.33
RTN4-213ENST00000485749 ZC3H4Q9UPT8 1303 aaKnown RBP6.76□□□□□ -1.33
RTN4-213ENST00000485749 TTLL8A6PVC2 850 aa6.75□□□□□ -1.33
RTN4-213ENST00000485749 SOBPA7XYQ1 873 aa6.75□□□□□ -1.33
RTN4-213ENST00000485749 LORP23490 312 aaPredicted RBP6.75□□□□□ -1.33
RTN4-213ENST00000485749 MFAP1P55081 439 aaKnown RBP6.75□□□□□ -1.33
RTN4-213ENST00000485749 QPCTQ16769 361 aa6.75□□□□□ -1.33
RTN4-213ENST00000485749 UBE2Q2Q8WVN8 375 aa6.75□□□□□ -1.33
RTN4-213ENST00000485749 SLC10A4Q96EP9 437 aa6.75□□□□□ -1.33
RTN4-213ENST00000485749 CALR3Q96L12 384 aaKnown RBP6.75□□□□□ -1.33
RTN4-213ENST00000485749 KCNA1Q09470 495 aa6.74□□□□□ -1.33
RTN4-213ENST00000485749 PDXDC2PQ6P474 469 aa6.74□□□□□ -1.33
RTN4-213ENST00000485749 MTMR14Q8NCE2 650 aa6.74□□□□□ -1.33
RTN4-213ENST00000485749 CARD14Q9BXL6 1004 aa6.74□□□□□ -1.33
RTN4-213ENST00000485749 ZBTB33Q86T24 672 aa6.73□□□□□ -1.33
RTN4-213ENST00000485749 ARHGAP9Q9BRR9 750 aa6.73□□□□□ -1.33
RTN4-213ENST00000485749 GDPD2Q9HCC8 539 aa6.73□□□□□ -1.33
RTN4-213ENST00000485749 MTMR7Q9Y216 660 aa6.73□□□□□ -1.33
RTN4-213ENST00000485749 USTQ9Y2C2 406 aa6.73□□□□□ -1.33
RTN4-213ENST00000485749 BRD1O95696 1058 aa6.72□□□□□ -1.33
RTN4-213ENST00000485749 KCNMA1Q12791 1236 aa6.72□□□□□ -1.33
RTN4-213ENST00000485749 ERFEQ4G0M1 354 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms